Analysis and prediction of functionally important sites in proteins

per Chakrabarti, Saikat, Lanczycki, Christopher J.
Publicat 2007

A tool for the prediction of functionally important sites in proteins using a library of functional templates

per Lanczycki, Christopher J, Chakrabarti, Saikat
Publicat 2008

Automated hierarchical classification of protein domain subfamilies based on functionally-divergent residue signatures

per Neuwald, Andrew F, Lanczycki, Christopher J, Marchler-Bauer, Aron
Publicat 2012

Prediction of functionally important sites from protein sequences using sparse kernel least squares classifiers

per Tang, Ke, Pugalenthi, Ganesan, Suganthan, P.N., Lanczycki, Christopher J., Chakrabarti, Saikat
Publicat 2009

Annotation of functional sites with the Conserved Domain Database

per Derbyshire, Myra K., Lanczycki, Christopher J., Bryant, Stephen H., Marchler-Bauer, Aron
Publicat 2012

SPEER-SERVER: a web server for prediction of protein specificity determining sites

per Chakraborty, Abhijit, Mandloi, Sapan, Lanczycki, Christopher J., Panchenko, Anna R., Chakrabarti, Saikat
Publicat 2012

Obtaining extremely large and accurate protein multiple sequence alignments from curated hierarchical alignments

per Neuwald, Andrew F, Lanczycki, Christopher J, Hodges, Theresa K, Marchler-Bauer, Aron
Publicat a Database (Oxford) (2020)

Refining multiple sequence alignments with conserved core regions

per Chakrabarti, Saikat, Lanczycki, Christopher J., Panchenko, Anna R., Przytycka, Teresa M., Thiessen, Paul A., Bryant, Stephen H.
Publicat 2006

State of the art: refinement of multiple sequence alignments

per Chakrabarti, Saikat, Lanczycki, Christopher J, Panchenko, Anna R, Przytycka, Teresa M, Thiessen, Paul A, Bryant, Stephen H
Publicat 2006

State of the art: refinement of multiple sequence alignments

per Chakrabarti, Saikat, Lanczycki, Christopher J, Panchenko, Anna R, Przytycka, Teresa M, Thiessen, Paul A, Bryant, Stephen H
Publicat 2010

MMDB and VAST+: tracking structural similarities between macromolecular complexes

per Madej, Thomas, Lanczycki, Christopher J., Zhang, Dachuan, Thiessen, Paul A., Geer, Renata C., Marchler-Bauer, Aron, Bryant, Stephen H.
Publicat 2014

iCn3D, a web-based 3D viewer for sharing 1D/2D/3D representations of biomolecular structures

per Wang, Jiyao, Youkharibache, Philippe, Zhang, Dachuan, Lanczycki, Christopher J, Geer, Renata C, Madej, Thomas, Phan, Lon, Ward, Minghong, Lu, Shennan, Marchler, Gabriele H, Wang, Yanli, Bryant, Stephen H, Geer, Lewis Y, Marchler-Bauer, Aron
Publicat a Bioinformatics (2020)

MMDB: 3D structures and macromolecular interactions

per Madej, Thomas, Addess, Kenneth J., Fong, Jessica H., Geer, Lewis Y., Geer, Renata C., Lanczycki, Christopher J., Liu, Chunlei, Lu, Shennan, Marchler-Bauer, Aron, Panchenko, Anna R., Chen, Jie, Thiessen, Paul A., Wang, Yanli, Zhang, Dachuan, Bryant, Stephen H.
Publicat 2012

CDD/SPARCLE: the conserved domain database in 2020

per Lu, Shennan, Wang, Jiyao, Chitsaz, Farideh, Derbyshire, Myra K, Geer, Renata C, Gonzales, Noreen R, Gwadz, Marc, Hurwitz, David I, Marchler, Gabriele H, Song, James S, Thanki, Narmada, Yamashita, Roxanne A, Yang, Mingzhang, Zhang, Dachuan, Zheng, Chanjuan, Lanczycki, Christopher J, Marchler-Bauer, Aron
Publicat a Nucleic Acids Res (2020)

CDD: conserved domains and protein three-dimensional structure

per Marchler-Bauer, Aron, Zheng, Chanjuan, Chitsaz, Farideh, Derbyshire, Myra K., Geer, Lewis Y., Geer, Renata C., Gonzales, Noreen R., Gwadz, Marc, Hurwitz, David I., Lanczycki, Christopher J., Lu, Fu, Lu, Shennan, Marchler, Gabriele H., Song, James S., Thanki, Narmada, Yamashita, Roxanne A., Zhang, Dachuan, Bryant, Stephen H.
Publicat 2013

CDD: NCBI's conserved domain database

per Marchler-Bauer, Aron, Derbyshire, Myra K., Gonzales, Noreen R., Lu, Shennan, Chitsaz, Farideh, Geer, Lewis Y., Geer, Renata C., He, Jane, Gwadz, Marc, Hurwitz, David I., Lanczycki, Christopher J., Lu, Fu, Marchler, Gabriele H., Song, James S., Thanki, Narmada, Wang, Zhouxi, Yamashita, Roxanne A., Zhang, Dachuan, Zheng, Chanjuan, Bryant, Stephen H.
Publicat a Nucleic Acids Res (2014)

RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation

per Li, Wenjun, O’Neill, Kathleen R, Haft, Daniel H, DiCuccio, Michael, Chetvernin, Vyacheslav, Badretdin, Azat, Coulouris, George, Chitsaz, Farideh, Derbyshire, Myra K, Durkin, A Scott, Gonzales, Noreen R, Gwadz, Marc, Lanczycki, Christopher J, Song, James S, Thanki, Narmada, Wang, Jiyao, Yamashita, Roxanne A, Yang, Mingzhang, Zheng, Chanjuan, Marchler-Bauer, Aron, Thibaud-Nissen, Françoise
Publicat a Nucleic Acids Res (2020)

CDD/SPARCLE: functional classification of proteins via subfamily domain architectures

per Marchler-Bauer, Aron, Bo, Yu, Han, Lianyi, He, Jane, Lanczycki, Christopher J., Lu, Shennan, Chitsaz, Farideh, Derbyshire, Myra K., Geer, Renata C., Gonzales, Noreen R., Gwadz, Marc, Hurwitz, David I., Lu, Fu, Marchler, Gabriele H., Song, James S., Thanki, Narmada, Wang, Zhouxi, Yamashita, Roxanne A., Zhang, Dachuan, Zheng, Chanjuan, Geer, Lewis Y., Bryant, Stephen H.
Publicat a Nucleic Acids Res (2017)

CDD: a Conserved Domain Database for protein classification

per Marchler-Bauer, Aron, Anderson, John B., Cherukuri, Praveen F., DeWeese-Scott, Carol, Geer, Lewis Y., Gwadz, Marc, He, Siqian, Hurwitz, David I., Jackson, John D., Ke, Zhaoxi, Lanczycki, Christopher J., Liebert, Cynthia A., Liu, Chunlei, Lu, Fu, Marchler, Gabriele H., Mullokandov, Mikhail, Shoemaker, Benjamin A., Simonyan, Vahan, Song, James S., Thiessen, Paul A., Yamashita, Roxanne A., Yin, Jodie J., Zhang, Dachuan, Bryant, Stephen H.
Publicat 2005

CDD: a conserved domain database for interactive domain family analysis

per Marchler-Bauer, Aron, Anderson, John B., Derbyshire, Myra K., DeWeese-Scott, Carol, Gonzales, Noreen R., Gwadz, Marc, Hao, Luning, He, Siqian, Hurwitz, David I., Jackson, John D., Ke, Zhaoxi, Krylov, Dmitri, Lanczycki, Christopher J., Liebert, Cynthia A., Liu, Chunlei, Lu, Fu, Lu, Shennan, Marchler, Gabriele H., Mullokandov, Mikhail, Song, James S., Thanki, Narmada, Yamashita, Roxanne A., Yin, Jodie J., Zhang, Dachuan, Bryant, Stephen H.
Publicat 2007