Metagenomic analysis: the challenge of the data bonanza

por Hunter, Chris I., Mitchell, Alex, Jones, Philip, McAnulla, Craig, Pesseat, Sebastien, Scheremetjew, Maxim, Hunter, Sarah
Publicado 2012

EBI metagenomics in 2016 - an expanding and evolving resource for the analysis and archiving of metagenomic data

por Mitchell, Alex, Bucchini, Francois, Cochrane, Guy, Denise, Hubert, Hoopen, Petra ten, Fraser, Matthew, Pesseat, Sebastien, Potter, Simon, Scheremetjew, Maxim, Sterk, Peter, Finn, Robert D.
Publicado en Nucleic Acids Res (2016)

InterProScan 5: genome-scale protein function classification

por Jones, Philip, Binns, David, Chang, Hsin-Yu, Fraser, Matthew, Li, Weizhong, McAnulla, Craig, McWilliam, Hamish, Maslen, John, Mitchell, Alex, Nuka, Gift, Pesseat, Sebastien, Quinn, Antony F., Sangrador-Vegas, Amaia, Scheremetjew, Maxim, Yong, Siew-Yit, Lopez, Rodrigo, Hunter, Sarah
Publicado 2014

EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies

por Mitchell, Alex L, Scheremetjew, Maxim, Denise, Hubert, Potter, Simon, Tarkowska, Aleksandra, Qureshi, Matloob, Salazar, Gustavo A, Pesseat, Sebastien, Boland, Miguel A, Hunter, Fiona M I, ten Hoopen, Petra, Alako, Blaise, Amid, Clara, Wilkinson, Darren J, Curtis, Thomas P, Cochrane, Guy, Finn, Robert D
Publicado en Nucleic Acids Res (2018)

EBI metagenomics—a new resource for the analysis and archiving of metagenomic data

por Hunter, Sarah, Corbett, Matthew, Denise, Hubert, Fraser, Matthew, Gonzalez-Beltran, Alejandra, Hunter, Christopher, Jones, Philip, Leinonen, Rasko, McAnulla, Craig, Maguire, Eamonn, Maslen, John, Mitchell, Alex, Nuka, Gift, Oisel, Arnaud, Pesseat, Sebastien, Radhakrishnan, Rajesh, Rocca-Serra, Philippe, Scheremetjew, Maxim, Sterk, Peter, Vaughan, Daniel, Cochrane, Guy, Field, Dawn, Sansone, Susanna-Assunta
Publicado 2014

The InterPro protein families database: the classification resource after 15 years

por Mitchell, Alex, Chang, Hsin-Yu, Daugherty, Louise, Fraser, Matthew, Hunter, Sarah, Lopez, Rodrigo, McAnulla, Craig, McMenamin, Conor, Nuka, Gift, Pesseat, Sebastien, Sangrador-Vegas, Amaia, Scheremetjew, Maxim, Rato, Claudia, Yong, Siew-Yit, Bateman, Alex, Punta, Marco, Attwood, Teresa K., Sigrist, Christian J.A., Redaschi, Nicole, Rivoire, Catherine, Xenarios, Ioannis, Kahn, Daniel, Guyot, Dominique, Bork, Peer, Letunic, Ivica, Gough, Julian, Oates, Matt, Haft, Daniel, Huang, Hongzhan, Natale, Darren A., Wu, Cathy H., Orengo, Christine, Sillitoe, Ian, Mi, Huaiyu, Thomas, Paul D., Finn, Robert D.
Publicado en Nucleic Acids Res (2014)

InterPro in 2019: improving coverage, classification and access to protein sequence annotations

por Mitchell, Alex L, Attwood, Teresa K, Babbitt, Patricia C, Blum, Matthias, Bork, Peer, Bridge, Alan, Brown, Shoshana D, Chang, Hsin-Yu, El-Gebali, Sara, Fraser, Matthew I, Gough, Julian, Haft, David R, Huang, Hongzhan, Letunic, Ivica, Lopez, Rodrigo, Luciani, Aurélien, Madeira, Fabio, Marchler-Bauer, Aron, Mi, Huaiyu, Natale, Darren A, Necci, Marco, Nuka, Gift, Orengo, Christine, Pandurangan, Arun P, Paysan-Lafosse, Typhaine, Pesseat, Sebastien, Potter, Simon C, Qureshi, Matloob A, Rawlings, Neil D, Redaschi, Nicole, Richardson, Lorna J, Rivoire, Catherine, Salazar, Gustavo A, Sangrador-Vegas, Amaia, Sigrist, Christian J A, Sillitoe, Ian, Sutton, Granger G, Thanki, Narmada, Thomas, Paul D, Tosatto, Silvio C E, Yong, Siew-Yit, Finn, Robert D
Publicado en Nucleic Acids Res (2019)

InterPro in 2011: new developments in the family and domain prediction database

por Hunter, Sarah, Jones, Philip, Mitchell, Alex, Apweiler, Rolf, Attwood, Teresa K., Bateman, Alex, Bernard, Thomas, Binns, David, Bork, Peer, Burge, Sarah, de Castro, Edouard, Coggill, Penny, Corbett, Matthew, Das, Ujjwal, Daugherty, Louise, Duquenne, Lauranne, Finn, Robert D., Fraser, Matthew, Gough, Julian, Haft, Daniel, Hulo, Nicolas, Kahn, Daniel, Kelly, Elizabeth, Letunic, Ivica, Lonsdale, David, Lopez, Rodrigo, Madera, Martin, Maslen, John, McAnulla, Craig, McDowall, Jennifer, McMenamin, Conor, Mi, Huaiyu, Mutowo-Muellenet, Prudence, Mulder, Nicola, Natale, Darren, Orengo, Christine, Pesseat, Sebastien, Punta, Marco, Quinn, Antony F., Rivoire, Catherine, Sangrador-Vegas, Amaia, Selengut, Jeremy D., Sigrist, Christian J. A., Scheremetjew, Maxim, Tate, John, Thimmajanarthanan, Manjulapramila, Thomas, Paul D., Wu, Cathy H., Yeats, Corin, Yong, Siew-Yit
Publicado 2012

InterPro in 2011: new developments in the family and domain prediction database

por Hunter, Sarah, Jones, Philip, Mitchell, Alex, Apweiler, Rolf, Attwood, Teresa K., Bateman, Alex, Bernard, Thomas, Binns, David, Bork, Peer, Burge, Sarah, de Castro, Edouard, Coggill, Penny, Corbett, Matthew, Das, Ujjwal, Daugherty, Louise, Duquenne, Lauranne, Finn, Robert D., Fraser, Matthew, Gough, Julian, Haft, Daniel, Hulo, Nicolas, Kahn, Daniel, Kelly, Elizabeth, Letunic, Ivica, Lonsdale, David, Lopez, Rodrigo, Madera, Martin, Maslen, John, McAnulla, Craig, McDowall, Jennifer, McMenamin, Conor, Mi, Huaiyu, Mutowo-Muellenet, Prudence, Mulder, Nicola, Natale, Darren, Orengo, Christine, Pesseat, Sebastien, Punta, Marco, Quinn, Antony F., Rivoire, Catherine, Sangrador-Vegas, Amaia, Selengut, Jeremy D., Sigrist, Christian J. A., Scheremetjew, Maxim, Tate, John, Thimmajanarthanan, Manjulapramila, Thomas, Paul D., Wu, Cathy H., Yeats, Corin, Yong, Siew-Yit
Publicado 2012

InterPro in 2017—beyond protein family and domain annotations

por Finn, Robert D., Attwood, Teresa K., Babbitt, Patricia C., Bateman, Alex, Bork, Peer, Bridge, Alan J., Chang, Hsin-Yu, Dosztányi, Zsuzsanna, El-Gebali, Sara, Fraser, Matthew, Gough, Julian, Haft, David, Holliday, Gemma L., Huang, Hongzhan, Huang, Xiaosong, Letunic, Ivica, Lopez, Rodrigo, Lu, Shennan, Marchler-Bauer, Aron, Mi, Huaiyu, Mistry, Jaina, Natale, Darren A., Necci, Marco, Nuka, Gift, Orengo, Christine A., Park, Youngmi, Pesseat, Sebastien, Piovesan, Damiano, Potter, Simon C., Rawlings, Neil D., Redaschi, Nicole, Richardson, Lorna, Rivoire, Catherine, Sangrador-Vegas, Amaia, Sigrist, Christian, Sillitoe, Ian, Smithers, Ben, Squizzato, Silvano, Sutton, Granger, Thanki, Narmada, Thomas, Paul D, Tosatto, Silvio C. E., Wu, Cathy H., Xenarios, Ioannis, Yeh, Lai-Su, Young, Siew-Yit, Mitchell, Alex L.
Publicado en Nucleic Acids Res (2017)