Unexpected Abundance of Coenzyme F(420)-Dependent Enzymes in Mycobacterium tuberculosis and Other Actinobacteria

di Selengut, Jeremy D., Haft, Daniel H.
Pubblicazione 2010

The TIGRFAMs database of protein families

di Haft, Daniel H., Selengut, Jeremy D., White, Owen
Pubblicazione 2003

ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process

di Basu Malay K, Selengut Jeremy D, Haft Daniel H
Pubblicazione 2011-11-01

Sites Inferred by Metabolic Background Assertion Labeling (SIMBAL): adapting the Partial Phylogenetic Profiling algorithm to scan sequences for signatures that predict protein func...

di Selengut, Jeremy D, Rusch, Douglas B, Haft, Daniel H
Pubblicazione 2010

Archaeosortases and Exosortases Are Widely Distributed Systems Linking Membrane Transit with Posttranslational Modification

di Haft, Daniel H., Payne, Samuel H., Selengut, Jeremy D.
Pubblicazione 2012

ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process

di Basu, Malay K, Selengut, Jeremy D, Haft, Daniel H
Pubblicazione 2011

Exopolysaccharide-associated protein sorting in environmental organisms: the PEP-CTERM/EpsH system. Application of a novel phylogenetic profiling heuristic

di Haft, Daniel H, Paulsen, Ian T, Ward, Naomi, Selengut, Jeremy D
Pubblicazione 2006

Expanding plant genome-editing scope by an engineered iSpyMacCas9 system that targets A-rich PAM sequences

di Sretenovic, Simon, Yin, Desuo, Levav, Adam, Selengut, Jeremy D., Mount, Stephen M., Qi, Yiping
Pubblicato in Plant Commun (2020)

TIGRFAMs and Genome Properties in 2013

di Haft, Daniel H., Selengut, Jeremy D., Richter, Roland A., Harkins, Derek, Basu, Malay K., Beck, Erin
Pubblicazione 2013

TIGRFAMs and Genome Properties: tools for the assignment of molecular function and biological process in prokaryotic genomes

di Selengut, Jeremy D., Haft, Daniel H., Davidsen, Tanja, Ganapathy, Anurhada, Gwinn-Giglio, Michelle, Nelson, William C., Richter, Alexander R., White, Owen
Pubblicazione 2007

Whole Genome Analysis of Leptospira licerasiae Provides Insight into Leptospiral Evolution and Pathogenicity

di Ricaldi, Jessica N., Fouts, Derrick E., Selengut, Jeremy D., Harkins, Derek M., Patra, Kailash P., Moreno, Angelo, Lehmann, Jason S., Purushe, Janaki, Sanka, Ravi, Torres, Michael, Webster, Nicholas J., Vinetz, Joseph M., Matthias, Michael A.
Pubblicazione 2012

Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage

di Dupont, Chris L, Rusch, Douglas B, Yooseph, Shibu, Lombardo, Mary-Jane, Alexander Richter, R, Valas, Ruben, Novotny, Mark, Yee-Greenbaum, Joyclyn, Selengut, Jeremy D, Haft, Dan H, Halpern, Aaron L, Lasken, Roger S, Nealson, Kenneth, Friedman, Robert, Craig Venter, J
Pubblicazione 2012

Expanding the scope of plant genome engineering with Cas12a orthologs and highly multiplexable editing systems

di Zhang, Yingxiao, Ren, Qiurong, Tang, Xu, Liu, Shishi, Malzahn, Aimee A., Zhou, Jianping, Wang, Jiaheng, Yin, Desuo, Pan, Changtian, Yuan, Mingzhu, Huang, Lan, Yang, Han, Zhao, Yuxin, Fang, Qing, Zheng, Xuelian, Tian, Li, Cheng, Yanhao, Le, Ysa, McCoy, Bailey, Franklin, Lidiya, Selengut, Jeremy D., Mount, Stephen M., Que, Qiudeng, Zhang, Yong, Qi, Yiping
Pubblicato in Nat Commun (2021)

Comparative Genomic Evidence for a Close Relationship between the Dimorphic Prosthecate Bacteria Hyphomonas neptunium and Caulobacter crescentus

di Badger, Jonathan H., Hoover, Timothy R., Brun, Yves V., Weiner, Ronald M., Laub, Michael T., Alexandre, Gladys, Mrázek, Jan, Ren, Qinghu, Paulsen, Ian T., Nelson, Karen E., Khouri, Hoda M., Radune, Diana, Sosa, Julia, Dodson, Robert J., Sullivan, Steven A., Rosovitz, M. J., Madupu, Ramana, Brinkac, Lauren M., Durkin, A. Scott, Daugherty, Sean C., Kothari, Sagar P., Giglio, Michelle Gwinn, Zhou, Liwei, Haft, Daniel H., Selengut, Jeremy D., Davidsen, Tanja M., Yang, Qi, Zafar, Nikhat, Ward, Naomi L.
Pubblicazione 2006

The InterPro Database, 2003 brings increased coverage and new features

di Mulder, Nicola J., Apweiler, Rolf, Attwood, Teresa K., Bairoch, Amos, Barrell, Daniel, Bateman, Alex, Binns, David, Biswas, Margaret, Bradley, Paul, Bork, Peer, Bucher, Phillip, Copley, Richard R., Courcelle, Emmanuel, Das, Ujjwal, Durbin, Richard, Falquet, Laurent, Fleischmann, Wolfgang, Griffiths-Jones, Sam, Haft, Daniel, Harte, Nicola, Hulo, Nicolas, Kahn, Daniel, Kanapin, Alexander, Krestyaninova, Maria, Lopez, Rodrigo, Letunic, Ivica, Lonsdale, David, Silventoinen, Ville, Orchard, Sandra E., Pagni, Marco, Peyruc, David, Ponting, Chris P., Selengut, Jeremy D., Servant, Florence, Sigrist, Christian J. A., Vaughan, Robert, Zdobnov, Evgueni M.
Pubblicazione 2003

InterPro: the integrative protein signature database

di Hunter, Sarah, Apweiler, Rolf, Attwood, Teresa K., Bairoch, Amos, Bateman, Alex, Binns, David, Bork, Peer, Das, Ujjwal, Daugherty, Louise, Duquenne, Lauranne, Finn, Robert D., Gough, Julian, Haft, Daniel, Hulo, Nicolas, Kahn, Daniel, Kelly, Elizabeth, Laugraud, Aurélie, Letunic, Ivica, Lonsdale, David, Lopez, Rodrigo, Madera, Martin, Maslen, John, McAnulla, Craig, McDowall, Jennifer, Mistry, Jaina, Mitchell, Alex, Mulder, Nicola, Natale, Darren, Orengo, Christine, Quinn, Antony F., Selengut, Jeremy D., Sigrist, Christian J. A., Thimma, Manjula, Thomas, Paul D., Valentin, Franck, Wilson, Derek, Wu, Cathy H., Yeats, Corin
Pubblicazione 2009

Comparative Genomics of Emerging Human Ehrlichiosis Agents

di Dunning Hotopp, Julie C., Lin, Mingqun, Madupu, Ramana, Crabtree, Jonathan, Angiuoli, Samuel V, Eisen, Jonathan, Seshadri, Rekha, Ren, Qinghu, Wu, Martin, Utterback, Teresa R, Smith, Shannon, Lewis, Matthew, Khouri, Hoda, Zhang, Chunbin, Niu, Hua, Lin, Quan, Ohashi, Norio, Zhi, Ning, Nelson, William, Brinkac, Lauren M, Dodson, Robert J, Rosovitz, M. J, Sundaram, Jaideep, Daugherty, Sean C, Davidsen, Tanja, Durkin, Anthony S, Gwinn, Michelle, Haft, Daniel H, Selengut, Jeremy D, Sullivan, Steven A, Zafar, Nikhat, Zhou, Liwei, Benahmed, Faiza, Forberger, Heather, Halpin, Rebecca, Mulligan, Stephanie, Robinson, Jeffrey, White, Owen, Rikihisa, Yasuko, Tettelin, Hervé
Pubblicazione 2006

Correction: Comparative Genomics of Emerging Human Ehrlichiosis Agents

di Dunning Hotopp, Julie C, Lin, Mingqun, Madupu, Ramana, Crabtree, Jonathan, Angiuoli, Samuel V, Eisen, Jonathan A, Seshadri, Rekha, Ren, Qinghu, Wu, Martin, Utterback, Teresa R, Smith, Shannon, Lewis, Matthew, Khouri, Hoda, Zhang, Chunbin, Niu, Hua, Lin, Quan, Ohashi, Norio, Zhi, Ning, Nelson, William, Brinkac, Lauren M, Dodson, Robert J, Rosovitz, M. J, Sundaram, Jaideep, Daugherty, Sean C, Davidsen, Tanja, Durkin, Anthony S, Gwinn, Michelle, Haft, Daniel H, Selengut, Jeremy D, Sullivan, Steven A, Zafar, Nikhat, Zhou, Liwei, Benahmed, Faiza, Forberger, Heather, Halpin, Rebecca, Mulligan, Stephanie, Robinson, Jeffrey, White, Owen, Rikihisa, Yasuko, Tettelin, Hervé
Pubblicazione 2006

New developments in the InterPro database

di Mulder, Nicola J., Apweiler, Rolf, Attwood, Teresa K., Bairoch, Amos, Bateman, Alex, Binns, David, Bork, Peer, Buillard, Virginie, Cerutti, Lorenzo, Copley, Richard, Courcelle, Emmanuel, Das, Ujjwal, Daugherty, Louise, Dibley, Mark, Finn, Robert, Fleischmann, Wolfgang, Gough, Julian, Haft, Daniel, Hulo, Nicolas, Hunter, Sarah, Kahn, Daniel, Kanapin, Alexander, Kejariwal, Anish, Labarga, Alberto, Langendijk-Genevaux, Petra S., Lonsdale, David, Lopez, Rodrigo, Letunic, Ivica, Madera, Martin, Maslen, John, McAnulla, Craig, McDowall, Jennifer, Mistry, Jaina, Mitchell, Alex, Nikolskaya, Anastasia N., Orchard, Sandra, Orengo, Christine, Petryszak, Robert, Selengut, Jeremy D., Sigrist, Christian J. A., Thomas, Paul D., Valentin, Franck, Wilson, Derek, Wu, Cathy H., Yeats, Corin
Pubblicazione 2007

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

di Ward, Naomi L., Challacombe, Jean F., Janssen, Peter H., Henrissat, Bernard, Coutinho, Pedro M., Wu, Martin, Xie, Gary, Haft, Daniel H., Sait, Michelle, Badger, Jonathan, Barabote, Ravi D., Bradley, Brent, Brettin, Thomas S., Brinkac, Lauren M., Bruce, David, Creasy, Todd, Daugherty, Sean C., Davidsen, Tanja M., DeBoy, Robert T., Detter, J. Chris, Dodson, Robert J., Durkin, A. Scott, Ganapathy, Anuradha, Gwinn-Giglio, Michelle, Han, Cliff S., Khouri, Hoda, Kiss, Hajnalka, Kothari, Sagar P., Madupu, Ramana, Nelson, Karen E., Nelson, William C., Paulsen, Ian, Penn, Kevin, Ren, Qinghu, Rosovitz, M. J., Selengut, Jeremy D., Shrivastava, Susmita, Sullivan, Steven A., Tapia, Roxanne, Thompson, L. Sue, Watkins, Kisha L., Yang, Qi, Yu, Chunhui, Zafar, Nikhat, Zhou, Liwei, Kuske, Cheryl R.
Pubblicazione 2009