Detection of DNA fusion junctions for BCR-ABL translocations by Anchored ChromPET

Por Shibata, Yoshiyuki, Malhotra, Ankit, Dutta, Anindya
Publicado em 2010

Pan-S replication patterns and chromosomal domains defined by genome-tiling arrays of ENCODE genomic areas

Por Karnani, Neerja, Taylor, Christopher, Malhotra, Ankit, Dutta, Anindya
Publicado em 2007

Yeast genome analysis identifies chromosomal translocation, gene conversion events and several sites of Ty element insertion

Por Shibata, Yoshiyuki, Malhotra, Ankit, Bekiranov, Stefan, Dutta, Anindya
Publicado em 2009

Abberantly placed impacted mandibular canine

Por Bahl, Rashi, Singla, Jeetinder, Gupta, Mohita, Malhotra, Ankit
Publicado em 2013

A novel class of small RNAs: tRNA-derived RNA fragments (tRFs)

Por Lee, Yong Sun, Shibata, Yoshiyuki, Malhotra, Ankit, Dutta, Anindya
Publicado em 2009

Genomic Study of Replication Initiation in Human Chromosomes Reveals the Influence of Transcription Regulation and Chromatin Structure on Origin Selection

Por Karnani, Neerja, Taylor, Christopher M., Malhotra, Ankit, Dutta, Anindya
Publicado em 2010

Chromosomal structural variations during progression of a prostate epithelial cell line to a malignant metastatic state inactivate the NF2, NIPSNAP1, UGT2B17, and LPIN2 genes

Por Malhotra, Ankit, Shibata, Yoshiyuki, Hall, Ira M, Dutta, Anindya
Publicado em 2013

Computational inference of a genomic pluripotency signature in human and mouse stem cells

Por Kurum, Esra, Benayoun, Bérénice A., Malhotra, Ankit, George, Joshy, Ucar, Duygu
Publicado no Biol Direct (2016)

Muscle-specific microRNA miR-206 promotes muscle differentiation

Por Kim, Hak Kyun, Lee, Yong Sun, Sivaprasad, Umasundari, Malhotra, Ankit, Dutta, Anindya
Publicado em 2006

Targeted Comparative RNA Interference Analysis Reveals Differential Requirement of Genes Essential for Cell Proliferation

Por Machida, Yuichi J., Chen, Yuefeng, Machida, Yuka, Malhotra, Ankit, Sarkar, Sukumar, Dutta, Anindya
Publicado em 2006

Ploidy-Seq: inferring mutational chronology by sequencing polyploid tumor subpopulations

Por Malhotra, Ankit, Wang, Yong, Waters, Jill, Chen, Ken, Meric-Bernstam, Funda, Hall, Ira M, Navin, Nicholas E
Publicado no Genome Med (2015)

miR-99 family of microRNAs suppresses the expression of prostate specific antigen and prostate cancer cell proliferation

Por Sun, Dandan, Lee, Yong Sun, Malhotra, Ankit, Kim, Hak Kyun, Matecic, Mirela, Evans, Clive, Jensen, Roderick V., Moskaluk, Christopher A., Dutta, Anindya
Publicado em 2011

Breakpoint profiling of 64 cancer genomes reveals numerous complex rearrangements spawned by homology-independent mechanisms

Por Malhotra, Ankit, Lindberg, Michael, Faust, Gregory G., Leibowitz, Mitchell L., Clark, Royden A., Layer, Ryan M., Quinlan, Aaron R., Hall, Ira M.
Publicado em 2013

Efficient CRISPR/Cas9-Mediated Genome Editing in Mice by Zygote Electroporation of Nuclease

Por Qin, Wenning, Dion, Stephanie L., Kutny, Peter M., Zhang, Yingfan, Cheng, Albert W., Jillette, Nathaniel L., Malhotra, Ankit, Geurts, Aron M., Chen, Yi-Guang, Wang, Haoyi
Publicado no Genetics (2015)

The tandem duplicator phenotype as a distinct genomic configuration in cancer

Por Menghi, Francesca, Inaki, Koichiro, Woo, XingYi, Kumar, Pooja A., Grzeda, Krzysztof R., Malhotra, Ankit, Yadav, Vinod, Kim, Hyunsoo, Marquez, Eladio J., Ucar, Duygu, Shreckengast, Phung T., Wagner, Joel P., MacIntyre, George, Murthy Karuturi, Krishna R., Scully, Ralph, Keck, James, Chuang, Jeffrey H., Liu, Edison T.
Publicado no Proc Natl Acad Sci U S A (2016)

Systems consequences of amplicon formation in human breast cancer

Por Inaki, Koichiro, Menghi, Francesca, Woo, Xing Yi, Wagner, Joel P., Jacques, Pierre-Étienne, Lee, Yi Fang, Shreckengast, Phung Trang, Soon, Wendy WeiJia, Malhotra, Ankit, Teo, Audrey S.M., Hillmer, Axel M., Khng, Alexis Jiaying, Ruan, Xiaoan, Ong, Swee Hoe, Bertrand, Denis, Nagarajan, Niranjan, Karuturi, R. Krishna Murthy, Hidalgo Miranda, Alfredo, Liu, Edison T.
Publicado em 2014

Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences

Por Poznik, G. David, Xue, Yali, Mendez, Fernando L., Willems, Thomas F., Massaia, Andrea, Wilson Sayres, Melissa A., Ayub, Qasim, McCarthy, Shane A., Narechania, Apurva, Kashin, Seva, Chen, Yuan, Banerjee, Ruby, Rodriguez-Flores, Juan L., Cerezo, Maria, Shao, Haojing, Gymrek, Melissa, Malhotra, Ankit, Louzada, Sandra, Desalle, Rob, Ritchie, Graham R. S., Cerveira, Eliza, Fitzgerald, Tomas W., Garrison, Erik, Marcketta, Anthony, Mittelman, David, Romanovitch, Mallory, Zhang, Chengsheng, Zheng-Bradley, Xiangqun, Abecasis, Goncalo R., McCarroll, Steven A., Flicek, Paul, Underhill, Peter A., Coin, Lachlan, Zerbino, Daniel R., Yang, Fengtang, Lee, Charles, Clarke, Laura, Auton, Adam, Erlich, Yaniv, Handsaker, Robert E., Bustamante, Carlos D., Tyler-Smith, Chris
Publicado no Nat Genet (2016)

An integrated map of structural variation in 2,504 human genomes

Por Sudmant, Peter H., Rausch, Tobias, Gardner, Eugene J., Handsaker, Robert E., Abyzov, Alexej, Huddleston, John, Zhang, Yan, Ye, Kai, Jun, Goo, Hsi-Yang Fritz, Markus, Konkel, Miriam K., Malhotra, Ankit, Stütz, Adrian M., Shi, Xinghua, Paolo Casale, Francesco, Chen, Jieming, Hormozdiari, Fereydoun, Dayama, Gargi, Chen, Ken, Malig, Maika, Chaisson, Mark J. P., Walter, Klaudia, Meiers, Sascha, Kashin, Seva, Garrison, Erik, Auton, Adam, Lam, Hugo Y. K., Jasmine Mu, Xinmeng, Alkan, Can, Antaki, Danny, Bae, Taejeong, Cerveira, Eliza, Chines, Peter, Chong, Zechen, Clarke, Laura, Dal, Elif, Ding, Li, Emery, Sarah, Fan, Xian, Gujral, Madhusudan, Kahveci, Fatma, Kidd, Jeffrey M., Kong, Yu, Lameijer, Eric-Wubbo, McCarthy, Shane, Flicek, Paul, Gibbs, Richard A., Marth, Gabor, Mason, Christopher E., Menelaou, Androniki, Muzny, Donna M., Nelson, Bradley J., Noor, Amina, Parrish, Nicholas F., Pendleton, Matthew, Quitadamo, Andrew, Raeder, Benjamin, Schadt, Eric E., Romanovitch, Mallory, Schlattl, Andreas, Sebra, Robert, Shabalin, Andrey A., Untergasser, Andreas, Walker, Jerilyn A., Wang, Min, Yu, Fuli, Zhang, Chengsheng, Zhang, Jing, Zheng-Bradley, Xiangqun, Zhou, Wanding, Zichner, Thomas, Sebat, Jonathan, Batzer, Mark A., McCarroll, Steven A., Mills, Ryan E., Gerstein, Mark B., Bashir, Ali, Stegle, Oliver, Devine, Scott E., Lee, Charles, Eichler, Evan E., Korbel, Jan O.
Publicado no Nature (2015)