Combinatorial Approach for Complex Disorder Prediction: Case Study of Neurodevelopmental Disorders

od Huynh, Linh, Hormozdiari, Fereydoun
izdano v Genetics (2018)

TAD fusion score: discovery and ranking the contribution of deletions to genome structure

od Huynh, Linh, Hormozdiari, Fereydoun
izdano v Genome Biol (2019)

Nebula: ultra-efficient mapping-free structural variant genotyper

od Khorsand, Parsoa, Hormozdiari, Fereydoun
izdano v Nucleic Acids Res (2021)

Kevlar: A Mapping-Free Framework for Accurate Discovery of De Novo Variants

od Standage, Daniel S., Brown, C. Titus, Hormozdiari, Fereydoun
izdano v iScience (2019)

Not All Scale-Free Networks Are Born Equal: The Role of the Seed Graph in PPI Network Evolution

od Hormozdiari, Fereydoun, Berenbrink, Petra, Pržulj, Nataša, Sahinalp, S. Cenk
Izdano 2007

Optimal pooling for genome re-sequencing with ultra-high-throughput short-read technologies

od Hajirasouliha, Iman, Hormozdiari, Fereydoun, Sahinalp, S. Cenk, Birol, Inanc
Izdano 2008

Relationship between insertion/deletion (indel) frequency of proteins and essentiality

od Chan, Simon K, Hsing, Michael, Hormozdiari, Fereydoun, Cherkasov, Artem
Izdano 2007

Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes

od Hormozdiari, Fereydoun, Alkan, Can, Eichler, Evan E., Sahinalp, S. Cenk
Izdano 2009

The discovery of integrated gene networks for autism and related disorders

od Hormozdiari, Fereydoun, Penn, Osnat, Borenstein, Elhanan, Eichler, Evan E.
izdano v Genome Res (2015)

Biomolecular network motif counting and discovery by color coding

od Alon, Noga, Dao, Phuong, Hajirasouliha, Iman, Hormozdiari, Fereydoun, Sahinalp, S. Cenk
Izdano 2008

Discovery of tandem and interspersed segmental duplications using high-throughput sequencing

od Soylev, Arda, Le, Thong Minh, Amini, Hajar, Alkan, Can, Hormozdiari, Fereydoun
izdano v Bioinformatics (2019)

Simultaneous structural variation discovery among multiple paired-end sequenced genomes

od Hormozdiari, Fereydoun, Hajirasouliha, Iman, McPherson, Andrew, Eichler, Evan E., Sahinalp, S. Cenk
Izdano 2011

Meltos: multi-sample tumor phylogeny reconstruction for structural variants

od Ricketts, Camir, Seidman, Daniel, Popic, Victoria, Hormozdiari, Fereydoun, Batzoglou, Serafim, Hajirasouliha, Iman
izdano v Bioinformatics (2019)

Genetic variation associated with increased insecticide resistance in the malaria mosquito, Anopheles coluzzii

od Main, Bradley J., Everitt, Amanda, Cornel, Anthony J., Hormozdiari, Fereydoun, Lanzaro, Gregory C.
izdano v Parasit Vectors (2018)

mrsFast: a cache-oblivious algorithm for short-read mapping

od Hach, Faraz, Hormozdiari, Fereydoun, Alkan, Can, Hormozdiari, Farhad, Birol, Inanc, Eichler, Evan E, Sahinalp, S Cenk
Izdano 2010

Detection and characterization of novel sequence insertions using paired-end next-generation sequencing

od Hajirasouliha, Iman, Hormozdiari, Fereydoun, Alkan, Can, Kidd, Jeffrey M., Birol, Inanc, Eichler, Evan E., Sahinalp, S. Cenk
Izdano 2010

Dissecting the genetic basis of comorbid epilepsy phenotypes in neurodevelopmental disorders

od Chow, Julie, Jensen, Matthew, Amini, Hajar, Hormozdiari, Farhad, Penn, Osnat, Shifman, Sagiv, Girirajan, Santhosh, Hormozdiari, Fereydoun
izdano v Genome Med (2019)

Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery

od Hormozdiari, Fereydoun, Hajirasouliha, Iman, Dao, Phuong, Hach, Faraz, Yorukoglu, Deniz, Alkan, Can, Eichler, Evan E., Sahinalp, S. Cenk
Izdano 2010

Alu repeat discovery and characterization within human genomes

od Hormozdiari, Fereydoun, Alkan, Can, Ventura, Mario, Hajirasouliha, Iman, Malig, Maika, Hach, Faraz, Yorukoglu, Deniz, Dao, Phuong, Bakhshi, Marzieh, Sahinalp, S. Cenk, Eichler, Evan E.
Izdano 2011

Functional disease architectures reveal unique biological role of transposable elements

od Hormozdiari, Farhad, van de Geijn, Bryce, Nasser, Joseph, Weissbrod, Omer, Gazal, Steven, Ju, Chelsea J. -T., Connor, Luke O’, Hujoel, Margaux L. A., Engreitz, Jesse, Hormozdiari, Fereydoun, Price, Alkes L.
izdano v Nat Commun (2019)