Introduction to Computational Proteomics

由 Colinge, Jacques, Bennett, Keiryn L
出版 2007

Using iTRAQ(®) Combined with Tandem Affinity Purification to Enhance Low-abundance Proteins Associated with Somatically-mutated EGFR Core Complexes in Lung Cancer

由 Haura, Eric B., Müller, André, Brietwieser, Florian P., Li, Jiannong, Grebien, Florian, Colinge, Jacques, Bennett, Keiryn L.
出版 2010

Optimisation of Downscaled Tandem Affinity Purifications to Identify Core Protein Complexes

由 Haura, Eric B., Sacco, Roberto, Li, Jiannong, Müller, André C., Grebien, Florian, Superti-Furga, Giulio, Bennett, Keiryn L.
出版 2012

Expanding the Interactome of the Noncanonical NF-κB Signaling Pathway

由 Willmann, Katharina L., Sacco, Roberto, Martins, Rui, Garncarz, Wojciech, Krolo, Ana, Knapp, Sylvia, Bennett, Keiryn L., Boztug, Kaan
發表在 J Proteome Res (2016)

Charting the molecular network of the drug target Bcr-Abl

由 Brehme, Marc, Hantschel, Oliver, Colinge, Jacques, Kaupe, Ines, Planyavsky, Melanie, Köcher, Thomas, Mechtler, Karl, Bennett, Keiryn L., Superti-Furga, Giulio
出版 2009

Initial characterization of the human central proteome

由 Burkard, Thomas R, Planyavsky, Melanie, Kaupe, Ines, Breitwieser, Florian P, Bürckstümmer, Tilmann, Bennett, Keiryn L, Superti-Furga, Giulio, Colinge, Jacques
出版 2011

abFASP-MS: Affinity-Based Filter-Aided Sample Preparation Mass Spectrometry for Quantitative Analysis of Chemically Labeled Protein Complexes

由 Huber, Marie L., Sacco, Roberto, Parapatics, Katja, Skucha, Anna, Khamina, Kseniya, Müller, André C., Rudashevskaya, Elena L., Bennett, Keiryn L.
出版 2014

Affinity Purification Strategies for Proteomic Analysis of Transcription Factor Complexes

由 Giambruno, Roberto, Grebien, Florian, Stukalov, Alexey, Knoll, Christian, Planyavsky, Melanie, Rudashevskaya, Elena L., Colinge, Jacques, Superti-Furga, Giulio, Bennett, Keiryn L.
出版 2013

The DEAD-box helicase DDX3X is a critical component of the TANK-binding kinase 1-dependent innate immune response

由 Soulat, Didier, Bürckstümmer, Tilmann, Westermayer, Sandra, Goncalves, Adriana, Bauch, Angela, Stefanovic, Adrijana, Hantschel, Oliver, Bennett, Keiryn L, Decker, Thomas, Superti-Furga, Giulio
出版 2008

The lysine methyltransferase SMYD3 interacts with hepatitis C virus NS5A and is a negative regulator of viral particle production

由 Eberle, Carol-Ann, Zayas, Margarita, Stukalov, Alexey, Pichlmair, Andreas, Alvisi, Gualtiero, Müller, André C., Bennett, Keiryn L., Bartenschlager, Ralf, Superti-Furga, Giulio
出版 2014

Proteome-wide small molecule and metabolite interaction mapping

由 Huber, Kilian V. M., Olek, Karin M., Müller, André C., Soon Heng Tan, Chris, Bennett, Keiryn L., Colinge, Jacques, Superti-Furga, Giulio
發表在 Nat Methods (2015)

A potent and highly specific FN3 monobody inhibitor of the Abl SH2 domain

由 Wojcik, John, Hantschel, Oliver, Grebien, Florian, Kaupe, Ines, Bennett, Keiryn L., Barkinge, John, Jones, Richard B., Koide, Akiko, Superti-Furga, Giulio, Koide, Shohei
出版 2010

Identifying Kinase Substrates via a Heavy ATP Kinase Assay and Quantitative Mass Spectrometry

由 Müller, André C., Giambruno, Roberto, Weißer, Juliane, Májek, Peter, Hofer, Alexandre, Bigenzahn, Johannes W., Superti-Furga, Giulio, Jessen, Henning J., Bennett, Keiryn L.
發表在 Sci Rep (2016)

The Btk tyrosine kinase is a major target of the Bcr-Abl inhibitor dasatinib

由 Hantschel, Oliver, Rix, Uwe, Schmidt, Uwe, Bürckstümmer, Tilmann, Kneidinger, Michael, Schütze, Gregor, Colinge, Jacques, Bennett, Keiryn L., Ellmeier, Wilfried, Valent, Peter, Superti-Furga, Giulio
出版 2007

NUP214-ABL1-mediated cell proliferation in T-cell acute lymphoblastic leukemia is dependent on the LCK kinase and various interacting proteins

由 De Keersmaecker, Kim, Porcu, Michaël, Cox, Luk, Girardi, Tiziana, Vandepoel, Roel, de Beeck, Joyce Op, Gielen, Olga, Mentens, Nicole, Bennett, Keiryn L., Hantschel, Oliver
出版 2014

A Miniaturized Chemical Proteomic Approach for Target Profiling of Clinical Kinase Inhibitors in Tumor Biopsies

由 Chamrád, Ivo, Rix, Uwe, Stukalov, Alexey, Gridling, Manuela, Parapatics, Katja, Müller, André C., Altiok, Soner, Colinge, Jacques, Superti-Furga, Giulio, Haura, Eric B., Bennett, Keiryn L.
出版 2013

Internalization of Pseudomonas aeruginosa Strain PAO1 into Epithelial Cells Is Promoted by Interaction of a T6SS Effector with the Microtubule Network

由 Sana, Thibault G., Baumann, Christoph, Merdes, Andreas, Soscia, Chantal, Rattei, Thomas, Hachani, Abderrahman, Jones, Cerith, Bennett, Keiryn L., Filloux, Alain, Superti-Furga, Giulio, Voulhoux, Romé, Bleves, Sophie
發表在 mBio (2015)

A Pilot Proteogenomic Study with Data Integration Identifies MCT1 and GLUT1 as Prognostic Markers in Lung Adenocarcinoma

由 Stewart, Paul A., Parapatics, Katja, Welsh, Eric A., Müller, André C., Cao, Haoyun, Fang, Bin, Koomen, John M., Eschrich, Steven A., Bennett, Keiryn L., Haura, Eric B.
發表在 PLoS One (2015)

Identification of kinase inhibitor targets in the lung cancer microenvironment by chemical and phosphoproteomics

由 Gridling, Manuela, Ficarro, Scott B., Breitwieser, Florian P., Song, Lanxi, Parapatics, Katja, Colinge, Jacques, Haura, Eric B., Marto, Jarrod A., Superti-Furga, Giulio, Bennett, Keiryn L., Rix, Uwe
發表在 Mol Cancer Ther (2014)

An Inducible Retroviral Expression System for Tandem Affinity Purification Mass-Spectrometry-Based Proteomics Identifies Mixed Lineage Kinase Domain-like Protein (MLKL) as an Heat...

由 Bigenzahn, Johannes W., Fauster, Astrid, Rebsamen, Manuele, Kandasamy, Richard K., Scorzoni, Stefania, Vladimer, Gregory I., Müller, André C., Gstaiger, Matthias, Zuber, Johannes, Bennett, Keiryn L., Superti-Furga, Giulio
發表在 Mol Cell Proteomics (2016)