Introduction to Computational Proteomics

di Colinge, Jacques, Bennett, Keiryn L
Pubblicazione 2007

Isobar(PTM): A software tool for the quantitative analysis of post-translationally modified proteins()

di Breitwieser, Florian P., Colinge, Jacques
Pubblicazione 2013

CLOUD – CeMM library of unique drugs

di Markt, Patrick, Dürnberger, Gerhard, Colinge, Jacques, Kubicek, Stefan
Pubblicazione 2012

An R package for generic modular response analysis and its application to estrogen and retinoic acid receptor crosstalk

di Jimenez-Dominguez, Gabriel, Ravel, Patrice, Jalaguier, Stéphan, Cavaillès, Vincent, Colinge, Jacques
Pubblicato in Sci Rep (2021)

A Computational Approach to Analyze the Mechanism of Action of the Kinase Inhibitor Bafetinib

di Burkard, Thomas R., Rix, Uwe, Breitwieser, Florian P., Superti-Furga, Giulio, Colinge, Jacques
Pubblicazione 2010

Building and exploring an integrated human kinase network: Global organization and medical entry points()

di Colinge, Jacques, César-Razquin, Adrián, Huber, Kilian, Breitwieser, Florian P., Májek, Peter, Superti-Furga, Giulio
Pubblicazione 2014

SingleCellSignalR: inference of intercellular networks from single-cell transcriptomics

di Cabello-Aguilar, Simon, Alame, Mélissa, Kon-Sun-Tack, Fabien, Fau, Caroline, Lacroix, Matthieu, Colinge, Jacques
Pubblicato in Nucleic Acids Res (2020)

The immune contexture of primary central nervous system diffuse large B cell lymphoma associates with patient survival and specific cell signaling

di Alame, Melissa, Cornillot, Emmanuel, Cacheux, Valère, Rigau, Valérie, Costes-Martineau, Valérie, Lacheretz-Szablewski, Vanessa, Colinge, Jacques
Pubblicato in Theranostics (2021)

Using iTRAQ(®) Combined with Tandem Affinity Purification to Enhance Low-abundance Proteins Associated with Somatically-mutated EGFR Core Complexes in Lung Cancer

di Haura, Eric B., Müller, André, Brietwieser, Florian P., Li, Jiannong, Grebien, Florian, Colinge, Jacques, Bennett, Keiryn L.
Pubblicazione 2010

The chemokine interleukin‐8 and the surface activation protein CD69 are markers for Bcr–Abl activity in chronic myeloid leukemia

di Hantschel, Oliver, Gstoettenbauer, Agnes, Colinge, Jacques, Kaupe, Ines, Bilban, Martin, Burkard, Thomas R., Valent, Peter, Superti-Furga, Giulio
Pubblicato in Mol Oncol (2008)

Virulence Factor NSs of Rift Valley Fever Virus Recruits the F-Box Protein FBXO3 To Degrade Subunit p62 of General Transcription Factor TFIIH

di Kainulainen, Markus, Habjan, Matthias, Hubel, Philipp, Busch, Laura, Lau, Simone, Colinge, Jacques, Superti-Furga, Giulio, Pichlmair, Andreas, Weber, Friedemann
Pubblicazione 2014

Charting the molecular network of the drug target Bcr-Abl

di Brehme, Marc, Hantschel, Oliver, Colinge, Jacques, Kaupe, Ines, Planyavsky, Melanie, Köcher, Thomas, Mechtler, Karl, Bennett, Keiryn L., Superti-Furga, Giulio
Pubblicazione 2009

Initial characterization of the human central proteome

di Burkard, Thomas R, Planyavsky, Melanie, Kaupe, Ines, Breitwieser, Florian P, Bürckstümmer, Tilmann, Bennett, Keiryn L, Superti-Furga, Giulio, Colinge, Jacques
Pubblicazione 2011

Affinity Purification Strategies for Proteomic Analysis of Transcription Factor Complexes

di Giambruno, Roberto, Grebien, Florian, Stukalov, Alexey, Knoll, Christian, Planyavsky, Melanie, Rudashevskaya, Elena L., Colinge, Jacques, Superti-Furga, Giulio, Bennett, Keiryn L.
Pubblicazione 2013

TOPS: a versatile software tool for statistical analysis and visualization of combinatorial gene-gene and gene-drug interaction screens

di Muellner, Markus K, Duernberger, Gerhard, Ganglberger, Florian, Kerzendorfer, Claudia, Uras, Iris Z, Schoenegger, Andreas, Bagienski, Klaudia, Colinge, Jacques, Nijman, Sebastian MB
Pubblicazione 2014

Proteome-wide small molecule and metabolite interaction mapping

di Huber, Kilian V. M., Olek, Karin M., Müller, André C., Soon Heng Tan, Chris, Bennett, Keiryn L., Colinge, Jacques, Superti-Furga, Giulio
Pubblicato in Nat Methods (2015)

The Btk tyrosine kinase is a major target of the Bcr-Abl inhibitor dasatinib

di Hantschel, Oliver, Rix, Uwe, Schmidt, Uwe, Bürckstümmer, Tilmann, Kneidinger, Michael, Schütze, Gregor, Colinge, Jacques, Bennett, Keiryn L., Ellmeier, Wilfried, Valent, Peter, Superti-Furga, Giulio
Pubblicazione 2007

The Prognostic Impact of the Aryl Hydrocarbon Receptor (AhR) in Primary Breast Cancer Depends on the Lymph Node Status

di Jeschke, Udo, Zhang, Xi, Kuhn, Christina, Jalaguier, Stéphan, Colinge, Jacques, Pfender, Kristina, Mayr, Doris, Ditsch, Nina, Harbeck, Nadia, Mahner, Sven, Sixou, Sophie, Cavaillès, Vincent
Pubblicato in Int J Mol Sci (2019)

A chemical genetic screen reveals a resistance mechanism to PI3K inhibitors in cancer

di Muellner, Markus K, Uras, Iris Z, Gapp, Bianca V, Kerzendorfer, Claudia, Smida, Michal, Lechtermann, Hannelore, Craig-Mueller, Nils, Colinge, Jacques, Duernberger, Gerhard, Nijman, Sebastian MB
Pubblicazione 2011

A Miniaturized Chemical Proteomic Approach for Target Profiling of Clinical Kinase Inhibitors in Tumor Biopsies

di Chamrád, Ivo, Rix, Uwe, Stukalov, Alexey, Gridling, Manuela, Parapatics, Katja, Müller, André C., Altiok, Soner, Colinge, Jacques, Superti-Furga, Giulio, Haura, Eric B., Bennett, Keiryn L.
Pubblicazione 2013