Sizing up the poly(A) tail: insights from deep sequencing

od Zheng, Dinghai, Tian, Bin
Izdano u Trends Biochem Sci (2014)

3′READS+, a sensitive and accurate method for 3′ end sequencing of polyadenylated RNA

od Zheng, Dinghai, Liu, Xiaochuan, Tian, Bin
Izdano u RNA (2016)

PolyA_DB 3 catalogs cleavage and polyadenylation sites identified by deep sequencing in multiple genomes

od Wang, Ruijia, Nambiar, Ram, Zheng, Dinghai, Tian, Bin
Izdano u Nucleic Acids Res (2018)

A compendium of conserved cleavage and polyadenylation events in mammalian genes

od Wang, Ruijia, Zheng, Dinghai, Yehia, Ghassan, Tian, Bin
Izdano u Genome Res (2018)

Unraveling regulation and new components of human P-bodies through a protein interaction framework and experimental validation

od Zheng, Dinghai, Chen, Chyi-Ying A., Shyu, Ann-Bin
Izdano 2011

Regulation of Intronic Polyadenylation by PCF11 Impacts mRNA Expression of Long Genes

od Wang, Ruijia, Zheng, Dinghai, Wei, Lu, Ding, Qingbao, Tian, Bin
Izdano u Cell Rep (2019)

Ago-TNRC6 complex triggers microRNA-mediated mRNA decay by promoting biphasic deadenylation followed by decapping

od Chen, Chyi-Ying A., Zheng, Dinghai, Xia, Zhenfang, Shyu, Ann-Bin
Izdano 2009

Alternative cleavage and polyadenylation in spermatogenesis connects chromatin regulation with post-transcriptional control

od Li, Wencheng, Park, Ji Yeon, Zheng, Dinghai, Hoque, Mainul, Yehia, Ghassan, Tian, Bin
Izdano u BMC Biol (2016)

3′READS + RIP defines differential Staufen1 binding to alternative 3′UTR isoforms and reveals structures and sequence motifs influencing binding and polysome association

od Zheng, Dinghai, Cho, Hana, Wang, Wei, Rambout, Xavier, Tian, Bin, Maquat, Lynne E.
Izdano u RNA (2020)

Deadenylation is prerequisite for P-body formation and mRNA decay in mammalian cells

od Zheng, Dinghai, Ezzeddine, Nader, Chen, Chyi-Ying A., Zhu, Wenmiao, He, Xiangwei, Shyu, Ann-Bin
Izdano 2008

Cellular stress alters 3′UTR landscape through alternative polyadenylation and isoform-specific degradation

od Zheng, Dinghai, Wang, Ruijia, Ding, Qingbao, Wang, Tianying, Xie, Bingning, Wei, Lu, Zhong, Zhaohua, Tian, Bin
Izdano u Nat Commun (2018)

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

od Liu, Xiaochuan, Freitas, Jaime, Zheng, Dinghai, Oliveira, Marta S., Hoque, Mainul, Martins, Torcato, Henriques, Telmo, Tian, Bin, Moreira, Alexandra
Izdano u RNA (2017)

Analysis of alterative cleavage and polyadenylation by 3′ region extraction and deep sequencing

od Hoque, Mainul, Ji, Zhe, Zheng, Dinghai, Luo, Wenting, Li, Wencheng, You, Bei, Park, Ji Yeon, Yehia, Ghassan, Tian, Bin
Izdano 2012

Comparative Analysis of mRNA Isoform Expression in Cardiac Hypertrophy and Development Reveals Multiple Post-Transcriptional Regulatory Modules

od Park, Ji Yeon, Li, Wencheng, Zheng, Dinghai, Zhai, Peiyong, Zhao, Yun, Matsuda, Takahisa, Vatner, Stephen F., Sadoshima, Junichi, Tian, Bin
Izdano 2011

The mRNA export receptor NXF1 coordinates transcriptional dynamics, alternative polyadenylation and mRNA export

od Chen, Suli, Wang, Ruijia, Zheng, Dinghai, Zhang, Heng, Chang, Xingya, Wang, Ke, Li, Wencheng, Fan, Jing, Tian, Bin, Cheng, Hong
Izdano u Mol Cell (2019)

ALS/FTD-associated protein FUS induces mitochondrial dysfunction by preferentially sequestering respiratory chain complex mRNAs

od Tsai, Yueh-Lin, Coady, Tristan H., Lu, Lei, Zheng, Dinghai, Alland, Isabel, Tian, Bin, Shneider, Neil A., Manley, James L.
Izdano u Genes Dev (2020)

Human TOB, an Antiproliferative Transcription Factor, Is a Poly(A)-Binding Protein-Dependent Positive Regulator of Cytoplasmic mRNA Deadenylation

od Ezzeddine, Nader, Chang, Tsung-Cheng, Zhu, Wenmiao, Yamashita, Akio, Chen, Chyi-Ying A., Zhong, Zhenping, Yamashita, Yukiko, Zheng, Dinghai, Shyu, Ann-Bin
Izdano 2007

A CRISPR RNA-binding protein screen reveals regulators of RUNX1 isoform generation

od Davis, Amanda G., Einstein, Jaclyn M., Zheng, Dinghai, Jayne, Nathan D., Fu, Xiang-Dong, Tian, Bin, Yeo, Gene W., Zhang, Dong-Er
Izdano u Blood Adv (2021)

Widespread transcript shortening through alternative polyadenylation in secretory cell differentiation

od Cheng, Larry C., Zheng, Dinghai, Baljinnyam, Erdene, Sun, Fangzheng, Ogami, Koichi, Yeung, Percy Luk, Hoque, Mainul, Lu, Chi-Wei, Manley, James L., Tian, Bin
Izdano u Nat Commun (2020)

Systematic Profiling of Poly(A)+ Transcripts Modulated by Core 3’ End Processing and Splicing Factors Reveals Regulatory Rules of Alternative Cleavage and Polyadenylation

od Li, Wencheng, You, Bei, Hoque, Mainul, Zheng, Dinghai, Luo, Wenting, Ji, Zhe, Park, Ji Yeon, Gunderson, Samuel I., Kalsotra, Auinash, Manley, James L., Tian, Bin
Izdano u PLoS Genet (2015)