Cranberry Product Decreases Fat Accumulation in Caenorhabditis elegans

le Sun, Quancai, Yue, Yiren, Shen, Peiyi, Yang, Jeremy J., Park, Yeonhwa
Foilsithe in J Med Food (2016)

Badapple: promiscuity patterns from noisy evidence

le Yang, Jeremy J., Ursu, Oleg, Lipinski, Christopher A., Sklar, Larry A., Oprea, Tudor I., Bologa, Cristian G.
Foilsithe in J Cheminform (2016)

REDIAL-2020: A suite of machine learning models to estimate Anti-SARS-CoV-2 activities

le Govinda, KC, Bocci, Giovanni, Verma, Srijan, Hassan, Mahmudulla, Holmes, Jayme, Yang, Jeremy J., Sirimulla, Suman, Oprea, Tudor I.
Foilsithe in ChemRxiv (2020)

The CARLSBAD Database: A Confederated Database of Chemical Bioactivities

le Mathias, Stephen L., Hines-Kay, Jarrett, Yang, Jeremy J., Zahoransky-Kohalmi, Gergely, Bologa, Cristian G., Ursu, Oleg, Oprea, Tudor I.
Foilsithe 2013

DrugCentral: online drug compendium

le Ursu, Oleg, Holmes, Jayme, Knockel, Jeffrey, Bologa, Cristian G., Yang, Jeremy J., Mathias, Stephen L., Nelson, Stuart J., Oprea, Tudor I.
Foilsithe in Nucleic Acids Res (2017)

DrugCentral 2018: an update

le Ursu, Oleg, Holmes, Jayme, Bologa, Cristian G, Yang, Jeremy J, Mathias, Stephen L, Stathias, Vasileios, Nguyen, Dac-Trung, Schürer, Stephan, Oprea, Tudor
Foilsithe in Nucleic Acids Res (2019)

Associating Drugs, Targets and Clinical Outcomes into an Integrated Network Affords a New Platform for Computer-Aided Drug Repurposing

le Oprea, Tudor I., Nielsen, Sonny Kim, Ursu, Oleg, Yang, Jeremy J., Taboureau, Olivier, Mathias, Stephen L., Kouskoumvekaki, lrene, Sklar, Larry A., Bologa, Cristian G.
Foilsithe 2011

How to Illuminate the Druggable Genome using Pharos

le Sheils, Timothy, Mathias, Stephen L., Siramshetty, Vishal B., Bocci, Giovanni, Bologa, Cristian G., Yang, Jeremy J., Waller, Anna, Southall, Noel, Nguyen, Dac-Trung, Oprea, Tudor I.
Foilsithe in Curr Protoc Bioinformatics (2020)

Formalizing drug indications on the road to therapeutic intent

le Nelson, Stuart J, Oprea, Tudor I, Ursu, Oleg, Bologa, Cristian G, Zaveri, Amrapali, Holmes, Jayme, Yang, Jeremy J, Mathias, Stephen L, Mani, Subramani, Tuttle, Mark S, Dumontier, Michel
Foilsithe in J Am Med Inform Assoc (2017)

TIN-X: target importance and novelty explorer

le Cannon, Daniel C, Yang, Jeremy J, Mathias, Stephen L, Ursu, Oleg, Mani, Subramani, Waller, Anna, Schürer, Stephan C, Jensen, Lars Juhl, Sklar, Larry A, Bologa, Cristian G, Oprea, Tudor I
Foilsithe in Bioinformatics (2017)

DrugCentral 2021 supports drug discovery and repositioning

le Avram, Sorin, Bologa, Cristian G, Holmes, Jayme, Bocci, Giovanni, Wilson, Thomas B, Nguyen, Dac-Trung, Curpan, Ramona, Halip, Liliana, Bora, Alina, Yang, Jeremy J, Knockel, Jeffrey, Sirimulla, Suman, Ursu, Oleg, Oprea, Tudor I
Foilsithe in Nucleic Acids Res (2020)

Structural Simplification of Bioactive Natural Products with Multicomponent Synthesis. 3. Fused Uracil-Containing Heterocycles as Novel Topoisomerase-Targeting Agents

le Evdokimov, Nikolai M., Van slambrouck, Severine, Heffeter, Petra, Tu, Lee, Le Calvé, Benjamin, Lamoral-Theys, Delphine, Hooten, Carla J., Uglinskii, Pavel Y., Rogelj, Snezna, Kiss, Robert, Steelant, Wim F.A., Berger, Walter, Yang, Jeremy J., Bologa, Cristian G., Kornienko, Alexander, Magedov, Igor V.
Foilsithe 2011

TCRD and Pharos 2021: mining the human proteome for disease biology

le Sheils, Timothy K, Mathias, Stephen L, Kelleher, Keith J, Siramshetty, Vishal B, Nguyen, Dac-Trung, Bologa, Cristian G, Jensen, Lars Juhl, Vidović, Dušica, Koleti, Amar, Schürer, Stephan C, Waller, Anna, Yang, Jeremy J, Holmes, Jayme, Bocci, Giovanni, Southall, Noel, Dharkar, Poorva, Mathé, Ewy, Simeonov, Anton, Oprea, Tudor I
Foilsithe in Nucleic Acids Res (2020)

Analyzing knowledge entities about COVID-19 using entitymetrics

le Yu, Qi, Wang, Qi, Zhang, Yafei, Chen, Chongyan, Ryu, Hyeyoung, Park, Namu, Baek, Jae-Eun, Li, Keyuan, Wu, Yifei, Li, Daifeng, Xu, Jian, Liu, Meijun, Yang, Jeremy J., Zhang, Chenwei, Lu, Chao, Zhang, Peng, Li, Xin, Chen, Baitong, Ebeid, Islam Akef, Fensel, Julia, Min, Chao, Zhai, Yujia, Song, Min, Ding, Ying, Bu, Yi
Foilsithe in Scientometrics (2021)

Drug target ontology to classify and integrate drug discovery data

le Lin, Yu, Mehta, Saurabh, Küçük-McGinty, Hande, Turner, John Paul, Vidovic, Dusica, Forlin, Michele, Koleti, Amar, Nguyen, Dac-Trung, Jensen, Lars Juhl, Guha, Rajarshi, Mathias, Stephen L., Ursu, Oleg, Stathias, Vasileios, Duan, Jianbin, Nabizadeh, Nooshin, Chung, Caty, Mader, Christopher, Visser, Ubbo, Yang, Jeremy J., Bologa, Cristian G., Oprea, Tudor I., Schürer, Stephan C.
Foilsithe in J Biomed Semantics (2017)

Novel Phenotypic Outcomes Identified for a Public Collection of Approved Drugs from a Publicly Accessible Panel of Assays

le Lee, Jonathan A., Shinn, Paul, Jaken, Susan, Oliver, Sarah, Willard, Francis S., Heidler, Steven, Peery, Robert B., Oler, Jennifer, Chu, Shaoyou, Southall, Noel, Dexheimer, Thomas S., Smallwood, Jeffrey, Huang, Ruili, Guha, Rajarshi, Jadhav, Ajit, Cox, Karen, Austin, Christopher P., Simeonov, Anton, Sittampalam, G. Sitta, Husain, Saba, Franklin, Natalie, Wild, David J., Yang, Jeremy J., Sutherland, Jeffrey J., Thomas, Craig J.
Foilsithe in PLoS One (2015)

Unexplored therapeutic opportunities in the human genome

le Oprea, Tudor I., Bologa, Cristian G., Brunak, Søren, Campbell, Allen, Gan, Gregory N., Gaulton, Anna, Gomez, Shawn M., Guha, Rajarshi, Hersey, Anne, Holmes, Jayme, Jadhav, Ajit, Jensen, Lars Juhl, Johnson, Gary L., Karlson, Anneli, Leach, Andrew R., Ma’ayan, Avi, Malovannaya, Anna, Mani, Subramani, Mathias, Stephen L., McManus, Michael T., Meehan, Terrence F., von Mering, Christian, Muthas, Daniel, Nguyen, Dac-Trung, Overington, John P., Papadatos, George, Qin, Jun, Reich, Christian, Roth, Bryan L., Schürer, Stephan C., Simeonov, Anton, Sklar, Larry A., Southall, Noel, Tomita, Susumu, Tudose, Ilinca, Ursu, Oleg, Vidovic, Dušica, Waller, Anna, Westergaard, David, Yang, Jeremy J., Zahoránszky-Köhalmi, Gergely
Foilsithe in Nat Rev Drug Discov (2018)