Genome Sequence of Christensenella minuta DSM 22607(T)

by Rosa, Bruce A., Hallsworth-Pepin, Kymberlie, Martin, John, Wollam, Aye, Mitreva, Makedonka
Published in Genome Announc (2017)

Genome Sequences of 15 Gardnerella vaginalis Strains Isolated from the Vaginas of Women with and without Bacterial Vaginosis

by Robinson, Lloyd S., Perry, Justin, Lek, Sai, Wollam, Aye, Sodergren, Erica, Weinstock, George, Lewis, Warren G., Lewis, Amanda L.
Published in Genome Announc (2016)

Evolutionary Genomics of Salmonella enterica Subspecies

by Desai, Prerak T., Porwollik, Steffen, Long, Fred, Cheng, Pui, Wollam, Aye, Clifton, Sandra W., Weinstock, George M., McClelland, Michael
Published 2013

Genome Sequences of 12 Bacterial Isolates Obtained from the Urine of Pregnant Women

by Weimer, Cory M., Deitzler, Grace E., Robinson, Lloyd S., Park, SoEun, Hallsworth-Pepin, Kymberlie, Wollam, Aye, Mitreva, Makedonka, Lewis, Warren G., Lewis, Amanda L.
Published in Genome Announc (2016)

Evolutionary Genomics of Salmonella enterica Subspecies

by Desai, Prerak T., Porwollik, Steffen, Long, Fred, Cheng, Pui, Wollam, Aye, Bhonagiri-Palsikar, Veena, Hallsworth-Pepin, Kymberlie, Clifton, Sandra W., Weinstock, George M., McClelland, Michael
Published 2013

Phenotypic and Genotypic Analysis of Clostridium difficile Isolates: a Single-Center Study

by Zhou, Yanjiao, Burnham, Carey-Ann D., Hink, Tiffany, Chen, Lei, Shaikh, Nurmohammad, Wollam, Aye, Sodergren, Erica, Weinstock, George M., Tarr, Phillip I., Dubberke, Erik R.
Published in J Clin Microbiol (2014)

Genome Sequences of 11 Human Vaginal Actinobacteria Strains

by Lewis, Amanda L., Deitzler, Grace E., Ruiz, Maria J., Weimer, Cory, Park, SoEun, Robinson, Lloyd S., Hallsworth-Pepin, Kymberlie, Wollam, Aye, Mitreva, Makedonka, Lewis, Warren G.
Published in Genome Announc (2016)

Genome Sequences of 14 Firmicutes Strains Isolated from the Human Vagina

by Deitzler, Grace E., Ruiz, Maria J., Weimer, Cory, Park, SoEun, Robinson, Lloyd, Hallsworth-Pepin, Kymberlie, Wollam, Aye, Mitreva, Makedonka, Lewis, Amanda L., Lewis, Warren G.
Published in Genome Announc (2016)

Improving Characterization of Understudied Human Microbiomes Using Targeted Phylogenetics

by Rosa, Bruce A., Mihindukulasuriya, Kathie, Hallsworth-Pepin, Kymberlie, Wollam, Aye, Martin, John, Snowden, Caroline, Dunne, William Michael, Weinstock, George M., Burnham, Carey-Ann D., Mitreva, Makedonka
Published in mSystems (2020)

Genome Sequences of Nine Gram-Negative Vaginal Bacterial Isolates

by Deitzler, Grace E., Ruiz, Maria J., Lu, Wendy, Weimer, Cory, Park, SoEun, Robinson, Lloyd S., Hallsworth-Pepin, Kymberlie, Wollam, Aye, Mitreva, Makedonka, Lewis, Warren G., Lewis, Amanda L.
Published in Genome Announc (2016)

Whole-Genome Analyses of Enterococcus faecium Isolates with Diverse Daptomycin MICs

by Diaz, Lorena, Tran, Truc T., Munita, Jose M., Miller, William R., Rincon, Sandra, Carvajal, Lina P., Wollam, Aye, Reyes, Jinnethe, Panesso, Diana, Rojas, Natalia L., Shamoo, Yousif, Murray, Barbara E., Weinstock, George M., Arias, Cesar A.
Published 2014

The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle

by Welsh, Eric A., Liberton, Michelle, Stöckel, Jana, Loh, Thomas, Elvitigala, Thanura, Wang, Chunyan, Wollam, Aye, Fulton, Robert S., Clifton, Sandra W., Jacobs, Jon M., Aurora, Rajeev, Ghosh, Bijoy K., Sherman, Louis A., Smith, Richard D., Wilson, Richard K., Pakrasi, Himadri B.
Published 2008

Extreme Sensory Complexity Encoded in the 10-Megabase Draft Genome Sequence of the Chromatically Acclimating Cyanobacterium Tolypothrix sp. PCC 7601

by Yerrapragada, Shaila, Shukla, Animesh, Hallsworth-Pepin, Kymberlie, Choi, Kwangmin, Wollam, Aye, Clifton, Sandra, Qin, Xiang, Muzny, Donna, Raghuraman, Sriram, Ashki, Haleh, Uzman, Akif, Highlander, Sarah K., Fryszczyn, Bartlomiej G., Fox, George E., Tirumalai, Madhan R., Liu, Yamei, Kim, Sun, Kehoe, David M., Weinstock, George M.
Published in Genome Announc (2015)

Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla

by Mahowald, Michael A., Rey, Federico E., Seedorf, Henning, Turnbaugh, Peter J., Fulton, Robert S., Wollam, Aye, Shah, Neha, Wang, Chunyan, Magrini, Vincent, Wilson, Richard K., Cantarel, Brandi L., Coutinho, Pedro M., Henrissat, Bernard, Crock, Lara W., Russell, Alison, Verberkmoes, Nathan C., Hettich, Robert L., Gordon, Jeffrey I.
Published 2009

Genome Sequence of Cronobacter sakazakii BAA-894 and Comparative Genomic Hybridization Analysis with Other Cronobacter Species

by Kucerova, Eva, Clifton, Sandra W., Xia, Xiao-Qin, Long, Fred, Porwollik, Steffen, Fulton, Lucinda, Fronick, Catrina, Minx, Patrick, Kyung, Kim, Warren, Wesley, Fulton, Robert, Feng, Dongyan, Wollam, Aye, Shah, Neha, Bhonagiri, Veena, Nash, William E., Hallsworth-Pepin, Kymberlie, Wilson, Richard K., McClelland, Michael, Forsythe, Stephen J.
Published 2010

Transferable Vancomycin Resistance in a Community-Associated MRSA Lineage

by Rossi, Flávia, Diaz, Lorena, Wollam, Aye, Panesso, Diana, Zhou, Yanjiao, Rincon, Sandra, Narechania, Apurva, Xing, Galen, Di Gioia, Thais S.R., Doi, André, Tran, Truc T., Reyes, Jinnethe, Munita, Jose M., Carvajal, Lina P., Hernandez-Roldan, Alejandra, Brandão, Denise, van der Heijden, Inneke Marie, Murray, Barbara E., Planet, Paul J., Weinstock, George M., Arias, Cesar A.
Published 2014

Modernizing Reference Genome Assemblies

by Church, Deanna M., Schneider, Valerie A., Graves, Tina, Auger, Katherine, Cunningham, Fiona, Bouk, Nathan, Chen, Hsiu-Chuan, Agarwala, Richa, McLaren, William M., Ritchie, Graham R.S., Albracht, Derek, Kremitzki, Milinn, Rock, Susan, Kotkiewicz, Holland, Kremitzki, Colin, Wollam, Aye, Trani, Lee, Fulton, Lucinda, Fulton, Robert, Matthews, Lucy, Whitehead, Siobhan, Chow, Will, Torrance, James, Dunn, Matthew, Harden, Glenn, Threadgold, Glen, Wood, Jonathan, Collins, Joanna, Heath, Paul, Griffiths, Guy, Pelan, Sarah, Grafham, Darren, E. Eichler, Evan, Weinstock, George, Mardis, Elaine R., Wilson, Richard K., Howe, Kerstin, Flicek, Paul, Hubbard, Tim
Published 2011

A framework for human microbiome research

by Methé, Barbara A., Nelson, Karen E., Pop, Mihai, Creasy, Heather H., Giglio, Michelle G., Huttenhower, Curtis, Gevers, Dirk, Petrosino, Joseph F., Abubucker, Sahar, Badger, Jonathan H., Chinwalla, Asif T., Earl, Ashlee M., FitzGerald, Michael G., Fulton, Robert S., Hallsworth-Pepin, Kymberlie, Lobos, Elizabeth A., Madupu, Ramana, Magrini, Vincent, Martin, John C., Mitreva, Makedonka, Muzny, Donna M., Sodergren, Erica J., Versalovic, James, Wollam, Aye M., Worley, Kim C., Wortman, Jennifer R., Young, Sarah K., Zeng, Qiandong, Aagaard, Kjersti M., Abolude, Olukemi O., Allen-Vercoe, Emma, Alm, Eric J., Alvarado, Lucia, Andersen, Gary L., Anderson, Scott, Appelbaum, Elizabeth, Arachchi, Harindra M., Armitage, Gary, Arze, Cesar A., Ayvaz, Tulin, Baker, Carl C., Begg, Lisa, Belachew, Tsegahiwot, Bhonagiri, Veena, Bihan, Monika, Blaser, Martin J., Bloom, Toby, Vivien Bonazzi, J., Brooks, Paul, Buck, Gregory A., Buhay, Christian J., Busam, Dana A., Campbell, Joseph L., Canon, Shane R., Cantarel, Brandi L., Chain, Patrick S., Chen, I-Min A., Chen, Lei, Chhibba, Shaila, Chu, Ken, Ciulla, Dawn M., Clemente, Jose C., Clifton, Sandra W., Conlan, Sean, Crabtree, Jonathan, Cutting, Mary A., Davidovics, Noam J., Davis, Catherine C., DeSantis, Todd Z., Deal, Carolyn, Delehaunty, Kimberley D., Dewhirst, Floyd E., Deych, Elena, Ding, Yan, Dooling, David J., Dugan, Shannon P., Dunne, Wm. Michael, Durkin, A. Scott, Edgar, Robert C., Erlich, Rachel L., Farmer, Candace N., Farrell, Ruth M., Faust, Karoline, Feldgarden, Michael, Felix, Victor M., Fisher, Sheila, Fodor, Anthony A., Forney, Larry, Foster, Leslie, Di Francesco, Valentina, Friedman, Jonathan, Friedrich, Dennis C., Fronick, Catrina C., Fulton, Lucinda L., Gao, Hongyu, Garcia, Nathalia, Giannoukos, Georgia, Giblin, Christina, Giovanni, Maria Y., Goldberg, Jonathan M., Goll, Johannes, Gonzalez, Antonio, Griggs, Allison, Gujja, Sharvari, Haas, Brian J., Hamilton, Holli A., Harris, Emily L., Hepburn, Theresa A., Herter, Brandi, Hoffmann, Diane E., Holder, Michael E., Howarth, Clinton, Huang, Katherine H., Huse, Susan M., Izard, Jacques, Jansson, Janet K., Jiang, Huaiyang, Jordan, Catherine, Joshi, Vandita, Katancik, James A., Keitel, Wendy A., Kelley, Scott T., Kells, Cristyn, Kinder-Haake, Susan, King, Nicholas B., Knight, Rob, Knights, Dan, Kong, Heidi H., Koren, Omry, Koren, Sergey, Kota, Karthik C., Kovar, Christie L., Kyrpides, Nikos C., La Rosa, Patricio S., Lee, Sandra L., Lemon, Katherine P., Lennon, Niall, Lewis, Cecil M., Lewis, Lora, Ley, Ruth E., Li, Kelvin, Liolios, Konstantinos, Liu, Bo, Liu, Yue, Lo, Chien-Chi, Lozupone, Catherine A., Lunsford, R. Dwayne, Madden, Tessa, Mahurkar, Anup A., Mannon, Peter J., Mardis, Elaine R., Markowitz, Victor M., Mavrommatis, Konstantinos, McCorrison, Jamison M., McDonald, Daniel, McEwen, Jean, McGuire, Amy L., McInnes, Pamela, Mehta, Teena, Mihindukulasuriya, Kathie A., Miller, Jason R., Minx, Patrick J., Newsham, Irene, Nusbaum, Chad, O’Laughlin, Michelle, Orvis, Joshua, Pagani, Ioanna, Palaniappan, Krishna, Patel, Shital M., Pearson, Matthew, Peterson, Jane, Podar, Mircea, Pohl, Craig, Pollard, Katherine S., Priest, Margaret E., Proctor, Lita M., Qin, Xiang, Raes, Jeroen, Ravel, Jacques, Reid, Jeffrey G., Rho, Mina, Rhodes, Rosamond, Riehle, Kevin P., Rivera, Maria C., Rodriguez-Mueller, Beltran, Rogers, Yu-Hui, Ross, Matthew C., Russ, Carsten, Sanka, Ravi K., Pamela Sankar, J., Sathirapongsasuti, Fah, Schloss, Jeffery A., Schloss, Patrick D., Schmidt, Thomas M., Scholz, Matthew, Schriml, Lynn, Schubert, Alyxandria M., Segata, Nicola, Segre, Julia A., Shannon, William D., Sharp, Richard R., Sharpton, Thomas J., Shenoy, Narmada, Sheth, Nihar U., Simone, Gina A., Singh, Indresh, Smillie, Chris S., Sobel, Jack D., Sommer, Daniel D., Spicer, Paul, Sutton, Granger G., Sykes, Sean M., Tabbaa, Diana G., Thiagarajan, Mathangi, Tomlinson, Chad M., Torralba, Manolito, Treangen, Todd J., Truty, Rebecca M., Vishnivetskaya, Tatiana A., Walker, Jason, Wang, Lu, Wang, Zhengyuan, Ward, Doyle V., Warren, Wesley, Watson, Mark A., Wellington, Christopher, Wetterstrand, Kris A., White, James R., Wilczek-Boney, Katarzyna, Wu, Yuan Qing, Wylie, Kristine M., Wylie, Todd, Yandava, Chandri, Ye, Liang, Ye, Yuzhen, Yooseph, Shibu, Youmans, Bonnie P., Zhang, Lan, Zhou, Yanjiao, Zhu, Yiming, Zoloth, Laurie, Zucker, Jeremy D., Birren, Bruce W., Gibbs, Richard A., Highlander, Sarah K., Weinstock, George M., Wilson, Richard K., White, Owen
Published 2012