Colonization State Influences the Hemocyte Proteome in a Beneficial Squid–Vibrio Symbiosis

Por Schleicher, Tyler R., VerBerkmoes, Nathan C., Shah, Manesh, Nyholm, Spencer V.
Publicado em 2014

Metaproteomics Reveals Abundant Transposase Expression in Mutualistic Endosymbionts

Por Kleiner, Manuel, Young, Jacque C., Shah, Manesh, VerBerkmoes, Nathan C., Dubilier, Nicole
Publicado em 2013

Differential Accumulation of Form I RubisCO in Rhodopseudomonas palustris CGA010 under Photoheterotrophic Growth Conditions with Reduced Carbon Sources

Por Joshi, Gauri S., Romagnoli, Simona, VerBerkmoes, Nathan C., Hettich, Robert L., Pelletier, Dale, Tabita, F. Robert
Publicado em 2009

Twelve previously unknown phage genera are ubiquitous in global oceans

Por Holmfeldt, Karin, Solonenko, Natalie, Shah, Manesh, Corrier, Kristen, Riemann, Lasse, VerBerkmoes, Nathan C., Sullivan, Matthew B.
Publicado em 2013

Integrating experimental and computational approaches for the proteogenomic characterizations of microbial communities

Por Hettich, Robert L, Russell, Alison L, VerBerkmoes, Nathan C, Shah, Manesh, Fraser-Liggett, Claire, Jansson, Janet K
Publicado em 2010

Affinity Purification and Characterization of a G-Protein Coupled Receptor, Saccharomyces cerevisiae Ste2p

Por Lee, Byung-Kwon, Jung, Kyung-Sik, Son, Cagdas, Kim, Heejung, VerBerkmoes, Nathan C., Arshava, Boris, Naider, Fred, Becker, Jeffrey M.
Publicado em 2007

New Group in the Leptospirillum Clade: Cultivation-Independent Community Genomics, Proteomics, and Transcriptomics of the New Species “Leptospirillum Group IV UBA BS”

Por Goltsman, Daniela S. Aliaga, Dasari, Mauna, Thomas, Brian C., Shah, Manesh B., VerBerkmoes, Nathan C., Hettich, Robert L., Banfield, Jillian F.
Publicado em 2013

Characterization of Cytochrome 579, an Unusual Cytochrome Isolated from an Iron-Oxidizing Microbial Community

Por Singer, Steven W., Chan, Clara S., Zemla, Adam, VerBerkmoes, Nathan C., Hwang, Mona, Hettich, Robert L., Banfield, Jillian F., Thelen, Michael P.
Publicado em 2008

Identification of Biofilm Matrix-Associated Proteins from an Acid Mine Drainage Microbial Community

Por Jiao, Yongqin, D'haeseleer, Patrik, Dill, Brian D., Shah, Manesh, VerBerkmoes, Nathan C., Hettich, Robert L., Banfield, Jillian F., Thelen, Michael P.
Publicado em 2011

Tissue-specific transcriptomics and proteomics of a filarial nematode and its Wolbachia endosymbiont

Por Luck, Ashley N., Anderson, Kathryn G., McClung, Colleen M., VerBerkmoes, Nathan C., Foster, Jeremy M., Michalski, Michelle L., Slatko, Barton E.
Publicado no BMC Genomics (2015)

Global Transcriptomic and Proteomic Responses of Dehalococcoides ethenogenes Strain 195 to Fixed Nitrogen Limitation

Por Lee, Patrick K. H., Dill, Brian D., Louie, Tiffany S., Shah, Manesh, VerBerkmoes, Nathan C., Andersen, Gary L., Zinder, Stephen H., Alvarez-Cohen, Lisa
Publicado em 2012

A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry

Por Pan, Chongle, Park, Byung H, McDonald, William H, Carey, Patricia A, Banfield, Jillian F, VerBerkmoes, Nathan C, Hettich, Robert L, Samatova, Nagiza F
Publicado em 2010

Proteomic identification of mammalian cell surface derived glycosylphosphatidylinositol-anchored proteins through selective glycan enrichment

Por Cortes, Leslie K, Vainauskas, Saulius, Dai, Nan, McClung, Colleen M, Shah, Manesh, Benner, Jack S, Corrêa, Ivan R, VerBerkmoes, Nathan C, Taron, Christopher H
Publicado no Proteomics (2014)

Proteogenomic basis for ecological divergence of closely related bacteria in natural acidophilic microbial communities

Por Denef, Vincent J., Kalnejais, Linda H., Mueller, Ryan S., Wilmes, Paul, Baker, Brett J., Thomas, Brian C., VerBerkmoes, Nathan C., Hettich, Robert L., Banfield, Jillian F.
Publicado em 2010

Metabolome-Proteome Differentiation Coupled to Microbial Divergence

Por Wilmes, Paul, Bowen, Benjamin P., Thomas, Brian C., Mueller, Ryan S., Denef, Vincent J., VerBerkmoes, Nathan C., Hettich, Robert L., Northen, Trent R., Banfield, Jillian F.
Publicado em 2010

Phage-Induced Expression of CRISPR-Associated Proteins Is Revealed by Shotgun Proteomics in Streptococcus thermophilus

Por Young, Jacque C., Dill, Brian D., Pan, Chongle, Hettich, Robert L., Banfield, Jillian F., Shah, Manesh, Fremaux, Christophe, Horvath, Philippe, Barrangou, Rodolphe, VerBerkmoes, Nathan C.
Publicado em 2012

Global Molecular and Morphological Effects of 24-Hour Chromium(VI) Exposure on Shewanella oneidensis MR-1

Por Chourey, Karuna, Thompson, Melissa R., Morrell-Falvey, Jennifer, VerBerkmoes, Nathan C., Brown, Steven D., Shah, Manesh, Zhou, Jizhong, Doktycz, Mitchel, Hettich, Robert L., Thompson, Dorothea K.
Publicado em 2006

Proteomics reveals a core molecular response of Pseudomonas putida F1 to acute chromate challenge

Por Thompson, Dorothea K, Chourey, Karuna, Wickham, Gene S, Thieman, Stephanie B, VerBerkmoes, Nathan C, Zhang, Bing, McCarthy, Andrea T, Rudisill, Matt A, Shah, Manesh, Hettich, Robert L
Publicado em 2010

Illuminating structural proteins in viral “dark matter” with metaproteomics

Por Brum, Jennifer R., Ignacio-Espinoza, J. Cesar, Kim, Eun-Hae, Trubl, Gareth, Jones, Robert M., Roux, Simon, VerBerkmoes, Nathan C., Rich, Virginia I., Sullivan, Matthew B.
Publicado no Proc Natl Acad Sci U S A (2016)

Enigmatic, ultrasmall, uncultivated Archaea

Por Baker, Brett J., Comolli, Luis R., Dick, Gregory J., Hauser, Loren J., Hyatt, Doug, Dill, Brian D., Land, Miriam L., VerBerkmoes, Nathan C., Hettich, Robert L., Banfield, Jillian F.
Publicado em 2010