Measuring Dissociation Rate Constants of Protein Complexes through Subunit Exchange: Experimental Design and Theoretical Modeling

بواسطة Pan, Chongle
منشور في 2011

Sigma: Strain-level inference of genomes from metagenomic analysis for biosurveillance

بواسطة Ahn, Tae-Hyuk, Chai, Juanjuan, Pan, Chongle
الحاوية / القاعدة Bioinformatics (2015)

Metaproteomics: Harnessing the power of high performance mass spectrometry to identify the suite of proteins that control metabolic activities in microbial communities

بواسطة Hettich, Robert L., Pan, Chongle, Chourey, Karuna, Giannone, Richard J.
منشور في 2013

Functional phylogenomics analysis of bacteria and archaea using consistent genome annotation with UniFam

بواسطة Chai, Juanjuan, Kora, Guruprasad, Ahn, Tae-Hyuk, Hyatt, Doug, Pan, Chongle
منشور في 2014

Microbial metaproteomics for characterizing the range of metabolic functions and activities of human gut microbiota

بواسطة Xiong, Weili, Abraham, Paul, Li, Zhou, Pan, Chongle, Hettich, Robert L.
الحاوية / القاعدة Proteomics (2015)

Elucidation of Zymomonas mobilis physiology and stress responses by quantitative proteomics and transcriptomics

بواسطة Yang, Shihui, Pan, Chongle, Hurst, Gregory B., Dice, Lezlee, Davison, Brian H., Brown, Steven D.
منشور في 2014

Using Apache Spark on genome assembly for scalable overlap-graph reduction

بواسطة Paul, Alexander J., Lawrence, Dylan, Song, Myoungkyu, Lim, Seung-Hwan, Pan, Chongle, Ahn, Tae-Hyuk
الحاوية / القاعدة Hum Genomics (2019)

Quantitative Tracking of Isotope Flows in Proteomes of Microbial Communities

بواسطة Pan, Chongle, Fischer, Curt R., Hyatt, Doug, Bowen, Benjamin P., Hettich, Robert L., Banfield, Jillian F.
منشور في 2011

Elevated temperature alters proteomic responses of individual organisms within a biofilm community

بواسطة Mosier, Annika C, Li, Zhou, Thomas, Brian C, Hettich, Robert L, Pan, Chongle, Banfield, Jillian F
الحاوية / القاعدة ISME J (2015)

Proteomic Stable Isotope Probing Reveals Taxonomically Distinct Patterns in Amino Acid Assimilation by Coastal Marine Bacterioplankton

بواسطة Bryson, Samuel, Li, Zhou, Pett-Ridge, Jennifer, Hettich, Robert L., Mayali, Xavier, Pan, Chongle, Mueller, Ryan S.
الحاوية / القاعدة mSystems (2016)

Quantitative proteomic analyses of the response of acidophilic microbial communities to different pH conditions

بواسطة Belnap, Christopher P, Pan, Chongle, Denef, Vincent J, Samatova, Nagiza F, Hettich, Robert L, Banfield, Jillian F
منشور في 2011

Proteomic Stable Isotope Probing Reveals Biosynthesis Dynamics of Slow Growing Methane Based Microbial Communities

بواسطة Marlow, Jeffrey J., Skennerton, Connor T., Li, Zhou, Chourey, Karuna, Hettich, Robert L., Pan, Chongle, Orphan, Victoria J.
الحاوية / القاعدة Front Microbiol (2016)

Microbial Community Structure–Function Relationships in Yaquina Bay Estuary Reveal Spatially Distinct Carbon and Nitrogen Cycling Capacities

بواسطة Kieft, Brandon, Li, Zhou, Bryson, Samuel, Crump, Byron C., Hettich, Robert, Pan, Chongle, Mayali, Xavier, Mueller, Ryan S.
الحاوية / القاعدة Front Microbiol (2018)

Metaproteomics Reveals Functional Shifts in Microbial and Human Proteins During a Preterm Infant Gut Colonization Case

بواسطة Young, Jacque C., Pan, Chongle, Adams, Rachel, Brooks, Brandon, Banfield, Jillian F., Morowitz, Michael J., Hettich, Robert L.
الحاوية / القاعدة Proteomics (2015)

Sipros Ensemble improves database searching and filtering for complex metaproteomics

بواسطة Guo, Xuan, Li, Zhou, Yao, Qiuming, Mueller, Ryan S, Eng, Jimmy K, Tabb, David L, Hervey, William Judson, Pan, Chongle
الحاوية / القاعدة Bioinformatics (2018)

Phenotype Fingerprinting Suggests the Involvement of Single-Genotype Consortia in Degradation of Aromatic Compounds by Rhodopseudomonas palustris

بواسطة Karpinets, Tatiana V., Pelletier, Dale A., Pan, Chongle, Uberbacher, Edward C., Melnichenko, Galina V., Hettich, Robert L., Samatova, Nagiza F.
منشور في 2009

Metagenome Sequencing of a Coastal Marine Microbial Community from Monterey Bay, California

بواسطة Mueller, Ryan S., Bryson, Sam, Kieft, Brandon, Li, Zhou, Pett-Ridge, Jennifer, Chavez, Francisco, Hettich, Robert L., Pan, Chongle, Mayali, Xavier
الحاوية / القاعدة Genome Announc (2015)

Phylogenetically conserved resource partitioning in the coastal microbial loop

بواسطة Bryson, Samuel, Li, Zhou, Chavez, Francisco, Weber, Peter K, Pett-Ridge, Jennifer, Hettich, Robert L, Pan, Chongle, Mayali, Xavier, Mueller, Ryan S
الحاوية / القاعدة ISME J (2017)

Impact of Pretreated Switchgrass and Biomass Carbohydrates on Clostridium thermocellum ATCC 27405 Cellulosome Composition: A Quantitative Proteomic Analysis

بواسطة Raman, Babu, Pan, Chongle, Hurst, Gregory B., Rodriguez, Miguel, McKeown, Catherine K., Lankford, Patricia K., Samatova, Nagiza F., Mielenz, Jonathan R.
منشور في 2009

Diverse and divergent protein post-translational modifications in two growth stages of a natural microbial community

بواسطة Li, Zhou, Wang, Yingfeng, Yao, Qiuming, Justice, Nicholas B., Ahn, Tae-Hyuk, Xu, Dong, Hettich, Robert L., Banfield, Jillian F., Pan, Chongle
الحاوية / القاعدة Nat Commun (2014)