Measuring Dissociation Rate Constants of Protein Complexes through Subunit Exchange: Experimental Design and Theoretical Modeling

Por Pan, Chongle
Publicado em 2011

Sigma: Strain-level inference of genomes from metagenomic analysis for biosurveillance

Por Ahn, Tae-Hyuk, Chai, Juanjuan, Pan, Chongle
Publicado no Bioinformatics (2015)

Metaproteomics: Harnessing the power of high performance mass spectrometry to identify the suite of proteins that control metabolic activities in microbial communities

Por Hettich, Robert L., Pan, Chongle, Chourey, Karuna, Giannone, Richard J.
Publicado em 2013

Functional phylogenomics analysis of bacteria and archaea using consistent genome annotation with UniFam

Por Chai, Juanjuan, Kora, Guruprasad, Ahn, Tae-Hyuk, Hyatt, Doug, Pan, Chongle
Publicado em 2014

Microbial metaproteomics for characterizing the range of metabolic functions and activities of human gut microbiota

Por Xiong, Weili, Abraham, Paul, Li, Zhou, Pan, Chongle, Hettich, Robert L.
Publicado no Proteomics (2015)

Elucidation of Zymomonas mobilis physiology and stress responses by quantitative proteomics and transcriptomics

Por Yang, Shihui, Pan, Chongle, Hurst, Gregory B., Dice, Lezlee, Davison, Brian H., Brown, Steven D.
Publicado em 2014

Quantitative Tracking of Isotope Flows in Proteomes of Microbial Communities

Por Pan, Chongle, Fischer, Curt R., Hyatt, Doug, Bowen, Benjamin P., Hettich, Robert L., Banfield, Jillian F.
Publicado em 2011

Elevated temperature alters proteomic responses of individual organisms within a biofilm community

Por Mosier, Annika C, Li, Zhou, Thomas, Brian C, Hettich, Robert L, Pan, Chongle, Banfield, Jillian F
Publicado no ISME J (2015)

Proteomic Stable Isotope Probing Reveals Taxonomically Distinct Patterns in Amino Acid Assimilation by Coastal Marine Bacterioplankton

Por Bryson, Samuel, Li, Zhou, Pett-Ridge, Jennifer, Hettich, Robert L., Mayali, Xavier, Pan, Chongle, Mueller, Ryan S.
Publicado no mSystems (2016)

Quantitative proteomic analyses of the response of acidophilic microbial communities to different pH conditions

Por Belnap, Christopher P, Pan, Chongle, Denef, Vincent J, Samatova, Nagiza F, Hettich, Robert L, Banfield, Jillian F
Publicado em 2011

Proteomic Stable Isotope Probing Reveals Biosynthesis Dynamics of Slow Growing Methane Based Microbial Communities

Por Marlow, Jeffrey J., Skennerton, Connor T., Li, Zhou, Chourey, Karuna, Hettich, Robert L., Pan, Chongle, Orphan, Victoria J.
Publicado no Front Microbiol (2016)

Metaproteomics Reveals Functional Shifts in Microbial and Human Proteins During a Preterm Infant Gut Colonization Case

Por Young, Jacque C., Pan, Chongle, Adams, Rachel, Brooks, Brandon, Banfield, Jillian F., Morowitz, Michael J., Hettich, Robert L.
Publicado no Proteomics (2015)

Phenotype Fingerprinting Suggests the Involvement of Single-Genotype Consortia in Degradation of Aromatic Compounds by Rhodopseudomonas palustris

Por Karpinets, Tatiana V., Pelletier, Dale A., Pan, Chongle, Uberbacher, Edward C., Melnichenko, Galina V., Hettich, Robert L., Samatova, Nagiza F.
Publicado em 2009

Metagenome Sequencing of a Coastal Marine Microbial Community from Monterey Bay, California

Por Mueller, Ryan S., Bryson, Sam, Kieft, Brandon, Li, Zhou, Pett-Ridge, Jennifer, Chavez, Francisco, Hettich, Robert L., Pan, Chongle, Mayali, Xavier
Publicado no Genome Announc (2015)

Impact of Pretreated Switchgrass and Biomass Carbohydrates on Clostridium thermocellum ATCC 27405 Cellulosome Composition: A Quantitative Proteomic Analysis

Por Raman, Babu, Pan, Chongle, Hurst, Gregory B., Rodriguez, Miguel, McKeown, Catherine K., Lankford, Patricia K., Samatova, Nagiza F., Mielenz, Jonathan R.
Publicado em 2009

Diverse and divergent protein post-translational modifications in two growth stages of a natural microbial community

Por Li, Zhou, Wang, Yingfeng, Yao, Qiuming, Justice, Nicholas B., Ahn, Tae-Hyuk, Xu, Dong, Hettich, Robert L., Banfield, Jillian F., Pan, Chongle
Publicado no Nat Commun (2014)

A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry

Por Pan, Chongle, Park, Byung H, McDonald, William H, Carey, Patricia A, Banfield, Jillian F, VerBerkmoes, Nathan C, Hettich, Robert L, Samatova, Nagiza F
Publicado em 2010

Phage-Induced Expression of CRISPR-Associated Proteins Is Revealed by Shotgun Proteomics in Streptococcus thermophilus

Por Young, Jacque C., Dill, Brian D., Pan, Chongle, Hettich, Robert L., Banfield, Jillian F., Shah, Manesh, Fremaux, Christophe, Horvath, Philippe, Barrangou, Rodolphe, VerBerkmoes, Nathan C.
Publicado em 2012

Isolation and chemical analysis of nanoparticles from English ivy (Hedera helix L.)

Por Lenaghan, Scott C., Burris, Jason N., Chourey, Karuna, Huang, Yujian, Xia, Lijin, Lady, Belinda, Sharma, Ritin, Pan, Chongle, LeJeune, Zorabel, Foister, Shane, Hettich, Robert L., Stewart, C. Neal, Zhang, Mingjun
Publicado em 2013

Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome

Por McNulty, Nathan P., Wu, Meng, Erickson, Alison R., Pan, Chongle, Erickson, Brian K., Martens, Eric C., Pudlo, Nicholas A., Muegge, Brian D., Henrissat, Bernard, Hettich, Robert L., Gordon, Jeffrey I.
Publicado em 2013