Phylogenetic Patterns in the Microbial Response to Resource Availability: Amino Acid Incorporation in San Francisco Bay

di Mayali, Xavier, Weber, Peter K., Mabery, Shalini, Pett-Ridge, Jennifer
Pubblicazione 2014

System-level analysis of metabolic trade-offs during anaerobic photoheterotrophic growth in Rhodopseudomonas palustris

di Navid, Ali, Jiao, Yongqin, Wong, Sergio Ernesto, Pett-Ridge, Jennifer
Pubblicato in BMC Bioinformatics (2019)

Long-term litter decomposition controlled by manganese redox cycling

di Keiluweit, Marco, Nico, Peter, Harmon, Mark E., Mao, Jingdong, Pett-Ridge, Jennifer, Kleber, Markus
Pubblicato in Proc Natl Acad Sci U S A (2015)

Metatranscriptomic reconstruction reveals RNA viruses with the potential to shape carbon cycling in soil

di Starr, Evan P., Nuccio, Erin E., Pett-Ridge, Jennifer, Banfield, Jillian F., Firestone, Mary K.
Pubblicato in Proc Natl Acad Sci U S A (2019)

High-throughput isotopic analysis of RNA microarrays to quantify microbial resource use

di Mayali, Xavier, Weber, Peter K, Brodie, Eoin L, Mabery, Shalini, Hoeprich, Paul D, Pett-Ridge, Jennifer
Pubblicazione 2012

Proteomic Stable Isotope Probing Reveals Taxonomically Distinct Patterns in Amino Acid Assimilation by Coastal Marine Bacterioplankton

di Bryson, Samuel, Li, Zhou, Pett-Ridge, Jennifer, Hettich, Robert L., Mayali, Xavier, Pan, Chongle, Mueller, Ryan S.
Pubblicato in mSystems (2016)

Characterizing Chemoautotrophy and Heterotrophy in Marine Archaea and Bacteria With Single-Cell Multi-isotope NanoSIP

di Dekas, Anne E., Parada, Alma E., Mayali, Xavier, Fuhrman, Jed A., Wollard, Jessica, Weber, Peter K., Pett-Ridge, Jennifer
Pubblicato in Front Microbiol (2019)

Metagenome Sequencing of a Coastal Marine Microbial Community from Monterey Bay, California

di Mueller, Ryan S., Bryson, Sam, Kieft, Brandon, Li, Zhou, Pett-Ridge, Jennifer, Chavez, Francisco, Hettich, Robert L., Pan, Chongle, Mayali, Xavier
Pubblicato in Genome Announc (2015)

Fungal-Bacterial Cooccurrence Patterns Differ between Arbuscular Mycorrhizal Fungi and Nonmycorrhizal Fungi across Soil Niches

di Yuan, Mengting Maggie, Kakouridis, Anne, Starr, Evan, Nguyen, Nhu, Shi, Shengjing, Pett-Ridge, Jennifer, Nuccio, Erin, Zhou, Jizhong, Firestone, Mary
Pubblicato in mBio (2021)

Phylogenetically conserved resource partitioning in the coastal microbial loop

di Bryson, Samuel, Li, Zhou, Chavez, Francisco, Weber, Peter K, Pett-Ridge, Jennifer, Hettich, Robert L, Pan, Chongle, Mayali, Xavier, Mueller, Ryan S
Pubblicato in ISME J (2017)

Multimodal LA-ICP-MS and nanoSIMS imaging enables copper mapping within photoreceptor megamitochondria in a zebrafish model of Menkes disease

di Ackerman, Cheri M., Weber, Peter K., Xiao, Tong, Thai, Bao, Kuo, Tiffani J., Zhang, Emily, Pett-Ridge, Jennifer, Chang, Christopher J.
Pubblicato in Metallomics (2018)

VirION2: a short- and long-read sequencing and informatics workflow to study the genomic diversity of viruses in nature

di Zablocki, Olivier, Michelsen, Michelle, Burris, Marie, Solonenko, Natalie, Warwick-Dugdale, Joanna, Ghosh, Romik, Pett-Ridge, Jennifer, Sullivan, Matthew B., Temperton, Ben
Pubblicato in PeerJ (2021)

Linking Microbial Phylogeny to Metabolic Activity at the Single-Cell Level by Using Enhanced Element Labeling-Catalyzed Reporter Deposition Fluorescence In Situ Hybridization (EL-F...

di Behrens, Sebastian, Lösekann, Tina, Pett-Ridge, Jennifer, Weber, Peter K., Ng, Wing-On, Stevenson, Bradley S., Hutcheon, Ian D., Relman, David A., Spormann, Alfred M.
Pubblicazione 2008

Permanent draft genome of strain ESFC-1: ecological genomics of a newly discovered lineage of filamentous diazotrophic cyanobacteria

di Everroad, R. Craig, Stuart, Rhona K., Bebout, Brad M., Detweiler, Angela M., Lee, Jackson Z., Woebken, Dagmar, Prufert-Bebout, Leslie, Pett-Ridge, Jennifer
Pubblicato in Stand Genomic Sci (2016)

Metagenomics reveals niche partitioning within the phototrophic zone of a microbial mat

di Lee, Jackson Z., Everroad, R. Craig, Karaoz, Ulas, Detweiler, Angela M., Pett-Ridge, Jennifer, Weber, Peter K., Prufert-Bebout, Leslie, Bebout, Brad M.
Pubblicato in PLoS One (2018)

Draft Genome Sequence of an Oscillatorian Cyanobacterium, Strain ESFC-1

di Everroad, R. Craig, Woebken, Dagmar, Singer, Steven W., Burow, Luke C., Kyrpides, Nikos, Woyke, Tanja, Goodwin, Lynne, Detweiler, Angela, Prufert-Bebout, Leslie, Pett-Ridge, Jennifer
Pubblicazione 2013

Cyanobacterial reuse of extracellular organic carbon in microbial mats

di Stuart, Rhona K, Mayali, Xavier, Lee, Jackson Z, Craig Everroad, R, Hwang, Mona, Bebout, Brad M, Weber, Peter K, Pett-Ridge, Jennifer, Thelen, Michael P
Pubblicato in ISME J (2016)

Taxon-specific microbial growth and mortality patterns reveal distinct temporal population responses to rewetting in a California grassland soil

di Blazewicz, Steven J., Hungate, Bruce A., Koch, Benjamin J., Nuccio, Erin E., Morrissey, Ember, Brodie, Eoin L., Schwartz, Egbert, Pett-Ridge, Jennifer, Firestone, Mary K.
Pubblicato in ISME J (2020)

Fixation and fate of C and N in the cyanobacterium Trichodesmium using nanometer-scale secondary ion mass spectrometry

di Finzi-Hart, Juliette A., Pett-Ridge, Jennifer, Weber, Peter K., Popa, Radu, Fallon, Stewart J., Gunderson, Troy, Hutcheon, Ian D., Nealson, Kenneth H., Capone, Douglas G.
Pubblicazione 2009

Identification of a novel cyanobacterial group as active diazotrophs in a coastal microbial mat using NanoSIMS analysis

di Woebken, Dagmar, Burow, Luke C, Prufert-Bebout, Leslie, Bebout, Brad M, Hoehler, Tori M, Pett-Ridge, Jennifer, Spormann, Alfred M, Weber, Peter K, Singer, Steven W
Pubblicazione 2012