Phylogenetic Patterns in the Microbial Response to Resource Availability: Amino Acid Incorporation in San Francisco Bay

per Mayali, Xavier, Weber, Peter K., Mabery, Shalini, Pett-Ridge, Jennifer
Publicat 2014

System-level analysis of metabolic trade-offs during anaerobic photoheterotrophic growth in Rhodopseudomonas palustris

per Navid, Ali, Jiao, Yongqin, Wong, Sergio Ernesto, Pett-Ridge, Jennifer
Publicat a BMC Bioinformatics (2019)

Long-term litter decomposition controlled by manganese redox cycling

per Keiluweit, Marco, Nico, Peter, Harmon, Mark E., Mao, Jingdong, Pett-Ridge, Jennifer, Kleber, Markus
Publicat a Proc Natl Acad Sci U S A (2015)

Metatranscriptomic reconstruction reveals RNA viruses with the potential to shape carbon cycling in soil

per Starr, Evan P., Nuccio, Erin E., Pett-Ridge, Jennifer, Banfield, Jillian F., Firestone, Mary K.
Publicat a Proc Natl Acad Sci U S A (2019)

High-throughput isotopic analysis of RNA microarrays to quantify microbial resource use

per Mayali, Xavier, Weber, Peter K, Brodie, Eoin L, Mabery, Shalini, Hoeprich, Paul D, Pett-Ridge, Jennifer
Publicat 2012

Proteomic Stable Isotope Probing Reveals Taxonomically Distinct Patterns in Amino Acid Assimilation by Coastal Marine Bacterioplankton

per Bryson, Samuel, Li, Zhou, Pett-Ridge, Jennifer, Hettich, Robert L., Mayali, Xavier, Pan, Chongle, Mueller, Ryan S.
Publicat a mSystems (2016)

Characterizing Chemoautotrophy and Heterotrophy in Marine Archaea and Bacteria With Single-Cell Multi-isotope NanoSIP

per Dekas, Anne E., Parada, Alma E., Mayali, Xavier, Fuhrman, Jed A., Wollard, Jessica, Weber, Peter K., Pett-Ridge, Jennifer
Publicat a Front Microbiol (2019)

Metagenome Sequencing of a Coastal Marine Microbial Community from Monterey Bay, California

per Mueller, Ryan S., Bryson, Sam, Kieft, Brandon, Li, Zhou, Pett-Ridge, Jennifer, Chavez, Francisco, Hettich, Robert L., Pan, Chongle, Mayali, Xavier
Publicat a Genome Announc (2015)

Fungal-Bacterial Cooccurrence Patterns Differ between Arbuscular Mycorrhizal Fungi and Nonmycorrhizal Fungi across Soil Niches

per Yuan, Mengting Maggie, Kakouridis, Anne, Starr, Evan, Nguyen, Nhu, Shi, Shengjing, Pett-Ridge, Jennifer, Nuccio, Erin, Zhou, Jizhong, Firestone, Mary
Publicat a mBio (2021)

Phylogenetically conserved resource partitioning in the coastal microbial loop

per Bryson, Samuel, Li, Zhou, Chavez, Francisco, Weber, Peter K, Pett-Ridge, Jennifer, Hettich, Robert L, Pan, Chongle, Mayali, Xavier, Mueller, Ryan S
Publicat a ISME J (2017)

Multimodal LA-ICP-MS and nanoSIMS imaging enables copper mapping within photoreceptor megamitochondria in a zebrafish model of Menkes disease

per Ackerman, Cheri M., Weber, Peter K., Xiao, Tong, Thai, Bao, Kuo, Tiffani J., Zhang, Emily, Pett-Ridge, Jennifer, Chang, Christopher J.
Publicat a Metallomics (2018)

VirION2: a short- and long-read sequencing and informatics workflow to study the genomic diversity of viruses in nature

per Zablocki, Olivier, Michelsen, Michelle, Burris, Marie, Solonenko, Natalie, Warwick-Dugdale, Joanna, Ghosh, Romik, Pett-Ridge, Jennifer, Sullivan, Matthew B., Temperton, Ben
Publicat a PeerJ (2021)

Linking Microbial Phylogeny to Metabolic Activity at the Single-Cell Level by Using Enhanced Element Labeling-Catalyzed Reporter Deposition Fluorescence In Situ Hybridization (EL-F...

per Behrens, Sebastian, Lösekann, Tina, Pett-Ridge, Jennifer, Weber, Peter K., Ng, Wing-On, Stevenson, Bradley S., Hutcheon, Ian D., Relman, David A., Spormann, Alfred M.
Publicat 2008

Permanent draft genome of strain ESFC-1: ecological genomics of a newly discovered lineage of filamentous diazotrophic cyanobacteria

per Everroad, R. Craig, Stuart, Rhona K., Bebout, Brad M., Detweiler, Angela M., Lee, Jackson Z., Woebken, Dagmar, Prufert-Bebout, Leslie, Pett-Ridge, Jennifer
Publicat a Stand Genomic Sci (2016)

Metagenomics reveals niche partitioning within the phototrophic zone of a microbial mat

per Lee, Jackson Z., Everroad, R. Craig, Karaoz, Ulas, Detweiler, Angela M., Pett-Ridge, Jennifer, Weber, Peter K., Prufert-Bebout, Leslie, Bebout, Brad M.
Publicat a PLoS One (2018)

Draft Genome Sequence of an Oscillatorian Cyanobacterium, Strain ESFC-1

per Everroad, R. Craig, Woebken, Dagmar, Singer, Steven W., Burow, Luke C., Kyrpides, Nikos, Woyke, Tanja, Goodwin, Lynne, Detweiler, Angela, Prufert-Bebout, Leslie, Pett-Ridge, Jennifer
Publicat 2013

Cyanobacterial reuse of extracellular organic carbon in microbial mats

per Stuart, Rhona K, Mayali, Xavier, Lee, Jackson Z, Craig Everroad, R, Hwang, Mona, Bebout, Brad M, Weber, Peter K, Pett-Ridge, Jennifer, Thelen, Michael P
Publicat a ISME J (2016)

Taxon-specific microbial growth and mortality patterns reveal distinct temporal population responses to rewetting in a California grassland soil

per Blazewicz, Steven J., Hungate, Bruce A., Koch, Benjamin J., Nuccio, Erin E., Morrissey, Ember, Brodie, Eoin L., Schwartz, Egbert, Pett-Ridge, Jennifer, Firestone, Mary K.
Publicat a ISME J (2020)

Fixation and fate of C and N in the cyanobacterium Trichodesmium using nanometer-scale secondary ion mass spectrometry

per Finzi-Hart, Juliette A., Pett-Ridge, Jennifer, Weber, Peter K., Popa, Radu, Fallon, Stewart J., Gunderson, Troy, Hutcheon, Ian D., Nealson, Kenneth H., Capone, Douglas G.
Publicat 2009

Identification of a novel cyanobacterial group as active diazotrophs in a coastal microbial mat using NanoSIMS analysis

per Woebken, Dagmar, Burow, Luke C, Prufert-Bebout, Leslie, Bebout, Brad M, Hoehler, Tori M, Pett-Ridge, Jennifer, Spormann, Alfred M, Weber, Peter K, Singer, Steven W
Publicat 2012