Phylogenetic Patterns in the Microbial Response to Resource Availability: Amino Acid Incorporation in San Francisco Bay

Bằng Mayali, Xavier, Weber, Peter K., Mabery, Shalini, Pett-Ridge, Jennifer
Được phát hành 2014

System-level analysis of metabolic trade-offs during anaerobic photoheterotrophic growth in Rhodopseudomonas palustris

Bằng Navid, Ali, Jiao, Yongqin, Wong, Sergio Ernesto, Pett-Ridge, Jennifer
Xuất bản năm BMC Bioinformatics (2019)

Long-term litter decomposition controlled by manganese redox cycling

Bằng Keiluweit, Marco, Nico, Peter, Harmon, Mark E., Mao, Jingdong, Pett-Ridge, Jennifer, Kleber, Markus
Xuất bản năm Proc Natl Acad Sci U S A (2015)

Metatranscriptomic reconstruction reveals RNA viruses with the potential to shape carbon cycling in soil

Bằng Starr, Evan P., Nuccio, Erin E., Pett-Ridge, Jennifer, Banfield, Jillian F., Firestone, Mary K.
Xuất bản năm Proc Natl Acad Sci U S A (2019)

High-throughput isotopic analysis of RNA microarrays to quantify microbial resource use

Bằng Mayali, Xavier, Weber, Peter K, Brodie, Eoin L, Mabery, Shalini, Hoeprich, Paul D, Pett-Ridge, Jennifer
Được phát hành 2012

Proteomic Stable Isotope Probing Reveals Taxonomically Distinct Patterns in Amino Acid Assimilation by Coastal Marine Bacterioplankton

Bằng Bryson, Samuel, Li, Zhou, Pett-Ridge, Jennifer, Hettich, Robert L., Mayali, Xavier, Pan, Chongle, Mueller, Ryan S.
Xuất bản năm mSystems (2016)

Characterizing Chemoautotrophy and Heterotrophy in Marine Archaea and Bacteria With Single-Cell Multi-isotope NanoSIP

Bằng Dekas, Anne E., Parada, Alma E., Mayali, Xavier, Fuhrman, Jed A., Wollard, Jessica, Weber, Peter K., Pett-Ridge, Jennifer
Xuất bản năm Front Microbiol (2019)

Metagenome Sequencing of a Coastal Marine Microbial Community from Monterey Bay, California

Bằng Mueller, Ryan S., Bryson, Sam, Kieft, Brandon, Li, Zhou, Pett-Ridge, Jennifer, Chavez, Francisco, Hettich, Robert L., Pan, Chongle, Mayali, Xavier
Xuất bản năm Genome Announc (2015)

Fungal-Bacterial Cooccurrence Patterns Differ between Arbuscular Mycorrhizal Fungi and Nonmycorrhizal Fungi across Soil Niches

Bằng Yuan, Mengting Maggie, Kakouridis, Anne, Starr, Evan, Nguyen, Nhu, Shi, Shengjing, Pett-Ridge, Jennifer, Nuccio, Erin, Zhou, Jizhong, Firestone, Mary
Xuất bản năm mBio (2021)

Phylogenetically conserved resource partitioning in the coastal microbial loop

Bằng Bryson, Samuel, Li, Zhou, Chavez, Francisco, Weber, Peter K, Pett-Ridge, Jennifer, Hettich, Robert L, Pan, Chongle, Mayali, Xavier, Mueller, Ryan S
Xuất bản năm ISME J (2017)

Multimodal LA-ICP-MS and nanoSIMS imaging enables copper mapping within photoreceptor megamitochondria in a zebrafish model of Menkes disease

Bằng Ackerman, Cheri M., Weber, Peter K., Xiao, Tong, Thai, Bao, Kuo, Tiffani J., Zhang, Emily, Pett-Ridge, Jennifer, Chang, Christopher J.
Xuất bản năm Metallomics (2018)

VirION2: a short- and long-read sequencing and informatics workflow to study the genomic diversity of viruses in nature

Bằng Zablocki, Olivier, Michelsen, Michelle, Burris, Marie, Solonenko, Natalie, Warwick-Dugdale, Joanna, Ghosh, Romik, Pett-Ridge, Jennifer, Sullivan, Matthew B., Temperton, Ben
Xuất bản năm PeerJ (2021)

Linking Microbial Phylogeny to Metabolic Activity at the Single-Cell Level by Using Enhanced Element Labeling-Catalyzed Reporter Deposition Fluorescence In Situ Hybridization (EL-F...

Bằng Behrens, Sebastian, Lösekann, Tina, Pett-Ridge, Jennifer, Weber, Peter K., Ng, Wing-On, Stevenson, Bradley S., Hutcheon, Ian D., Relman, David A., Spormann, Alfred M.
Được phát hành 2008

Permanent draft genome of strain ESFC-1: ecological genomics of a newly discovered lineage of filamentous diazotrophic cyanobacteria

Bằng Everroad, R. Craig, Stuart, Rhona K., Bebout, Brad M., Detweiler, Angela M., Lee, Jackson Z., Woebken, Dagmar, Prufert-Bebout, Leslie, Pett-Ridge, Jennifer
Xuất bản năm Stand Genomic Sci (2016)

Metagenomics reveals niche partitioning within the phototrophic zone of a microbial mat

Bằng Lee, Jackson Z., Everroad, R. Craig, Karaoz, Ulas, Detweiler, Angela M., Pett-Ridge, Jennifer, Weber, Peter K., Prufert-Bebout, Leslie, Bebout, Brad M.
Xuất bản năm PLoS One (2018)

Draft Genome Sequence of an Oscillatorian Cyanobacterium, Strain ESFC-1

Bằng Everroad, R. Craig, Woebken, Dagmar, Singer, Steven W., Burow, Luke C., Kyrpides, Nikos, Woyke, Tanja, Goodwin, Lynne, Detweiler, Angela, Prufert-Bebout, Leslie, Pett-Ridge, Jennifer
Được phát hành 2013

Cyanobacterial reuse of extracellular organic carbon in microbial mats

Bằng Stuart, Rhona K, Mayali, Xavier, Lee, Jackson Z, Craig Everroad, R, Hwang, Mona, Bebout, Brad M, Weber, Peter K, Pett-Ridge, Jennifer, Thelen, Michael P
Xuất bản năm ISME J (2016)

Taxon-specific microbial growth and mortality patterns reveal distinct temporal population responses to rewetting in a California grassland soil

Bằng Blazewicz, Steven J., Hungate, Bruce A., Koch, Benjamin J., Nuccio, Erin E., Morrissey, Ember, Brodie, Eoin L., Schwartz, Egbert, Pett-Ridge, Jennifer, Firestone, Mary K.
Xuất bản năm ISME J (2020)

Fixation and fate of C and N in the cyanobacterium Trichodesmium using nanometer-scale secondary ion mass spectrometry

Bằng Finzi-Hart, Juliette A., Pett-Ridge, Jennifer, Weber, Peter K., Popa, Radu, Fallon, Stewart J., Gunderson, Troy, Hutcheon, Ian D., Nealson, Kenneth H., Capone, Douglas G.
Được phát hành 2009

Identification of a novel cyanobacterial group as active diazotrophs in a coastal microbial mat using NanoSIMS analysis

Bằng Woebken, Dagmar, Burow, Luke C, Prufert-Bebout, Leslie, Bebout, Brad M, Hoehler, Tori M, Pett-Ridge, Jennifer, Spormann, Alfred M, Weber, Peter K, Singer, Steven W
Được phát hành 2012