Trimethylamine and Organic Matter Additions Reverse Substrate Limitation Effects on the δ(13)C Values of Methane Produced in Hypersaline Microbial Mats

per Kelley, Cheryl A., Nicholson, Brooke E., Beaudoin, Claire S., Detweiler, Angela M., Bebout, Brad M.
Publicat a Appl Environ Microbiol (2014)

Permanent draft genome of strain ESFC-1: ecological genomics of a newly discovered lineage of filamentous diazotrophic cyanobacteria

per Everroad, R. Craig, Stuart, Rhona K., Bebout, Brad M., Detweiler, Angela M., Lee, Jackson Z., Woebken, Dagmar, Prufert-Bebout, Leslie, Pett-Ridge, Jennifer
Publicat a Stand Genomic Sci (2016)

Metagenomics reveals niche partitioning within the phototrophic zone of a microbial mat

per Lee, Jackson Z., Everroad, R. Craig, Karaoz, Ulas, Detweiler, Angela M., Pett-Ridge, Jennifer, Weber, Peter K., Prufert-Bebout, Leslie, Bebout, Brad M.
Publicat a PLoS One (2018)

Draft Genome Sequence of an Oscillatorian Cyanobacterium, Strain ESFC-1

per Everroad, R. Craig, Woebken, Dagmar, Singer, Steven W., Burow, Luke C., Kyrpides, Nikos, Woyke, Tanja, Goodwin, Lynne, Detweiler, Angela, Prufert-Bebout, Leslie, Pett-Ridge, Jennifer
Publicat 2013

Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate

per D’haeseleer, Patrik, Lee, Jackson Z., Prufert-Bebout, Leslie, Burow, Luke C., Detweiler, Angela M., Weber, Peter K., Karaoz, Ulas, Brodie, Eoin L., Glavina del Rio, Tijana, Tringe, Susannah G., Bebout, Brad M., Pett-Ridge, Jennifer
Publicat a Stand Genomic Sci (2017)

An Unusual Inverted Saline Microbial Mat Community in an Interdune Sabkha in the Rub' al Khali (the Empty Quarter), United Arab Emirates

per McKay, Christopher P., Rask, Jon C., Detweiler, Angela M., Bebout, Brad M., Everroad, R. Craig, Lee, Jackson Z., Chanton, Jeffrey P., Mayer, Marisa H., Caraballo, Adrian A. L., Kapili, Bennett, Al-Awar, Meshgan, Al-Farraj, Asma
Publicat a PLoS One (2016)

Lettuce (Lactuca sativa) productivity influenced by microbial inocula under nitrogen-limited conditions in aquaponics

per Day, Jessica A., Diener, Christian, Otwell, Anne E., Tams, Kourtney E., Bebout, Brad, Detweiler, Angela M., Lee, Michael D., Scott, Madeline T., Ta, Wilson, Ha, Monica, Carreon, Shienna A., Tong, Kenny, Ali, Abdirizak A., Gibbons, Sean M., Baliga, Nitin S.
Publicat a PLoS One (2021)

Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies

per Sevim, Volkan, Lee, Juna, Egan, Robert, Clum, Alicia, Hundley, Hope, Lee, Janey, Everroad, R. Craig, Detweiler, Angela M., Bebout, Brad M., Pett-Ridge, Jennifer, Göker, Markus, Murray, Alison E., Lindemann, Stephen R., Klenk, Hans-Peter, O’Malley, Ronan, Zane, Matthew, Cheng, Jan-Fang, Copeland, Alex, Daum, Christopher, Singer, Esther, Woyke, Tanja
Publicat a Sci Data (2019)

Upper airway gene expression differentiates COVID-19 from other acute respiratory illnesses and reveals suppression of innate immune responses by SARS-CoV-2

per Mick, Eran, Kamm, Jack, Pisco, Angela Oliveira, Ratnasiri, Kalani, Babik, Jennifer M., Calfee, Carolyn S., Castañeda, Gloria, DeRisi, Joseph L., Detweiler, Angela M., Hao, Samantha, Kangelaris, Kirsten N., Kumar, G. Renuka, Li, Lucy M., Mann, Sabrina A., Neff, Norma, Prasad, Priya A., Serpa, Paula Hayakawa, Shah, Sachin J., Spottiswoode, Natasha, Tan, Michelle, Christenson, Stephanie A., Kistler, Amy, Langelier, Charles
Publicat a medRxiv (2020)

Upper airway gene expression reveals suppressed immune responses to SARS-CoV-2 compared with other respiratory viruses

per Mick, Eran, Kamm, Jack, Pisco, Angela Oliveira, Ratnasiri, Kalani, Babik, Jennifer M., Castañeda, Gloria, DeRisi, Joseph L., Detweiler, Angela M., Hao, Samantha L., Kangelaris, Kirsten N., Kumar, G. Renuka, Li, Lucy M., Mann, Sabrina A., Neff, Norma, Prasad, Priya A., Serpa, Paula Hayakawa, Shah, Sachin J., Spottiswoode, Natasha, Tan, Michelle, Calfee, Carolyn S., Christenson, Stephanie A., Kistler, Amy, Langelier, Charles
Publicat a Nat Commun (2020)

Identification of a Polymorphism in the N Gene of SARS-CoV-2 That Adversely Impacts Detection by Reverse Transcription-PCR

per Vanaerschot, Manu, Mann, Sabrina A., Webber, James T., Kamm, Jack, Bell, Sidney M., Bell, John, Hong, Si Noon, Nguyen, Minh Phuong, Chan, Lienna Y., Bhatt, Karan D., Tan, Michelle, Detweiler, Angela M., Espinosa, Alex, Wu, Wesley, Batson, Joshua, Dynerman, David, Wadford, Debra A., Puschnik, Andreas S., Neff, Norma, Ahyong, Vida, Miller, Steve, Ayscue, Patrick, Tato, Cristina M., Paul, Simon, Kistler, Amy L., DeRisi, Joseph L., Crawford, Emily D.
Publicat a J Clin Microbiol (2020)

Impaired immune signaling and changes in the lung microbiome precede secondary bacterial pneumonia in COVID-19

per Tsitsiklis, Alexandra, Zha, Beth Shoshana, Byrne, Ashley, DeVoe, Catherine, Rackaityte, Elze, Levan, Sophia, Sunshine, Sara, Mick, Eran, Ghale, Rajani, Love, Christina, Tarashansky, Alexander J., Pisco, Angela, Albright, Jack, Jauregui, Alejandra, Sarma, Aartik, Neff, Norma, Serpa, Paula Hayakawa, Deiss, Thomas J., Kistler, Amy, Carrillo, Sidney, Ansel, K. Mark, Leligdowicz, Aleksandra, Christenson, Stephanie, Detweiler, Angela, Jones, Norman G., Wu, Bing, Darmanis, Spyros, Lynch, Susan V., DeRisi, Joseph L., Matthay, Michael A., Hendrickson, Carolyn M., Kangelaris, Kirsten N., Krummel, Matthew F., Woodruff, Prescott G., Erle, David J., Rosenberg, Oren, Calfee, Carolyn S., Langelier, Charles R.
Publicat a medRxiv (2021)

Clinical features, diagnostics, and outcomes of patients presenting with acute respiratory illness: A retrospective cohort study of patients with and without COVID-19

per Shah, Sachin J., Barish, Peter N., Prasad, Priya A., Kistler, Amy, Neff, Norma, Kamm, Jack, Li, Lucy M., Chiu, Charles Y., Babik, Jennifer M., Fang, Margaret C., Abe-Jones, Yumiko, Alipanah, Narges, Alvarez, Francisco N., Botvinnik, Olga Borisovna, Castaneda, Gloria, Dadasovich, Rand M., Davis, Jennifer, Deng, Xianding, DeRisi, Joseph L., Detweiler, Angela M., Federman, Scot, Haliburton, John, Hao, Samantha, Kerkhoff, Andrew D., Kumar, G. Renuka, Malcolm, Katherine B., Mann, Sabrina A., Martinez, Sandra, Mary, Rupa K., Mick, Eran, Mwakibete, Lusajo, Najafi, Nader, Peluso, Michael J., Phelps, Maira, Pisco, Angela Oliveira, Ratnasiri, Kalani, Rubio, Luis A., Sellas, Anna, Sherwood, Kyla D., Sheu, Jonathan, Spottiswoode, Natasha, Tan, Michelle, Yu, Guixia, Kangelaris, Kirsten Neudoerffer, Langelier, Charles
Publicat a EClinicalMedicine (2020)

Rapid deployment of SARS-CoV-2 testing: The CLIAHUB

per Crawford, Emily D., Acosta, Irene, Ahyong, Vida, Anderson, Erika C., Arevalo, Shaun, Asarnow, Daniel, Axelrod, Shannon, Ayscue, Patrick, Azimi, Camillia S., Azumaya, Caleigh M., Bachl, Stefanie, Bachmutsky, Iris, Bhaduri, Aparna, Brown, Jeremy Bancroft, Batson, Joshua, Behnert, Astrid, Boileau, Ryan M., Bollam, Saumya R., Bonny, Alain R., Booth, David, Borja, Michael Jerico B., Brown, David, Buie, Bryan, Burnett, Cassandra E., Byrnes, Lauren E., Cabral, Katelyn A., Cabrera, Joana P., Caldera, Saharai, Canales, Gabriela, Castañeda, Gloria R., Chan, Agnes Protacio, Chang, Christopher R., Charles-Orszag, Arthur, Cheung, Carly, Chio, Unseng, Chow, Eric D., Citron, Y. Rose, Cohen, Allison, Cohn, Lillian B., Chiu, Charles, Cole, Mitchel A., Conrad, Daniel N., Constantino, Angela, Cote, Andrew, Crayton-Hall, Tre’Jon, Darmanis, Spyros, Detweiler, Angela M., Dial, Rebekah L., Dong, Shen, Duarte, Elias M., Dynerman, David, Egger, Rebecca, Fanton, Alison, Frumm, Stacey M., Fu, Becky Xu Hua, Garcia, Valentina E., Garcia, Julie, Gladkova, Christina, Goldman, Miriam, Gomez-Sjoberg, Rafael, Gordon, M. Grace, Grove, James C. R., Gupta, Shweta, Haddjeri-Hopkins, Alexis, Hadley, Pierce, Haliburton, John, Hao, Samantha L., Hartoularos, George, Herrera, Nadia, Hilberg, Melissa, Ho, Kit Ying E., Hoppe, Nicholas, Hosseinzadeh, Shayan, Howard, Conor J., Hussmann, Jeffrey A., Hwang, Elizabeth, Ingebrigtsen, Danielle, Jackson, Julia R., Jowhar, Ziad M., Kain, Danielle, Kim, James Y. S., Kistler, Amy, Kreutzfeld, Oriana, Kulsuptrakul, Jessie, Kung, Andrew F., Langelier, Charles, Laurie, Matthew T., Lee, Lena, Leng, Kun, Leon, Kristoffer E., Leonetti, Manuel D., Levan, Sophia R., Li, Sam, Li, Aileen W., Liu, Jamin, Lubin, Heidi S., Lyden, Amy, Mann, Jennifer, Mann, Sabrina, Margulis, Gorica, Marquez, Diana M., Marsh, Bryan P., Martyn, Calla, McCarthy, Elizabeth E., McGeever, Aaron, Merriman, Alexander F., Meyer, Lauren K., Miller, Steve, Moore, Megan K., Mowery, Cody T., Mukhtar, Tanzila, Mwakibete, Lusajo L., Narez, Noelle, Neff, Norma F., Osso, Lindsay A., Oviedo, Diter, Peng, Suping, Phelps, Maira, Phong, Kiet, Picard, Peter, Pieper, Lindsey M., Pincha, Neha, Pisco, Angela Oliveira, Pogson, Angela, Pourmal, Sergei, Puccinelli, Robert R., Puschnik, Andreas S., Rackaityte, Elze, Raghavan, Preethi, Raghavan, Madhura, Reese, James, Replogle, Joseph M., Retallack, Hanna, Reyes, Helen, Rose, Donald, Rosenberg, Marci F., Sanchez-Guerrero, Estella, Sattler, Sydney M., Savy, Laura, See, Stephanie K., Sellers, Kristin K., Serpa, Paula Hayakawa, Sheehy, Maureen, Sheu, Jonathan, Silas, Sukrit, Streithorst, Jessica A., Strickland, Jack, Stryke, Doug, Sunshine, Sara, Suslow, Peter, Sutanto, Renaldo, Tamura, Serena, Tan, Michelle, Tan, Jiongyi, Tang, Alice, Tato, Cristina M., Taylor, Jack C., Tenvooren, Iliana, Thompson, Erin M., Thornborrow, Edward C., Tse, Eric, Tung, Tony, Turner, Marc L., Turner, Victoria S., Turnham, Rigney E., Turocy, Mary J., Vaidyanathan, Trisha V., Vainchtein, Ilia D., Vanaerschot, Manu, Vazquez, Sara E., Wandler, Anica M., Wapniarski, Anne, Webber, James T., Weinberg, Zara Y., Westbrook, Alexandra, Wong, Allison W., Wong, Emily, Worthington, Gajus, Xie, Fang, Xu, Albert, Yamamoto, Terrina, Yang, Ying, Yarza, Fauna, Zaltsman, Yefim, Zheng, Tina, DeRisi, Joseph L.
Publicat a PLoS Pathog (2020)