Stochastic variation of transcript abundance in C57BL/6J mice

Por Vedell, Peter T, Svenson, Karen L, Churchill, Gary A
Publicado em 2011

Concordant Effects of Aromatase Inhibitors on Gene Expression in ER(+) Rat and Human Mammary Cancers and Modulation of the Proteins Coded by these Genes An uninvited scientific art...

Por Lu, Yan, You, Ming, Ghazoui, Zara, Liu, Pengyuan, Vedell, Peter T., Wen, Weidong, Bode, Ann M., Grubbs, Clinton J., Lubet, Ronald A.
Publicado em 2013

TSPYL Family Regulates CYP17A1 and CYP3A4 Expression: Potential Mechanism Contributing to Abiraterone Response in Metastatic Castration‐Resistant Prostate Cancer

Por Qin, Sisi, Liu, Duan, Kohli, Manish, Wang, Liguo, Vedell, Peter T., Hillman, David W., Niu, Nifang, Yu, Jia, Weinshilboum, Richard M., Wang, Liewei
Publicado no Clin Pharmacol Ther (2017)

Effects on Gene Expression in Rat Liver after Administration of RXR Agonists: UAB30, 4-Methyl-UAB30, and Targretin (Bexarotene)

Por Vedell, Peter T., Lu, Yan, Grubbs, Clinton J., Yin, Yuxin, Jiang, Hui, Bland, Kirby I., Muccio, Donald D., Cvetkovic, Dusica, You, Ming, Lubet, Ronald
Publicado em 2013

Measure transcript integrity using RNA-seq data

Por Wang, Liguo, Nie, Jinfu, Sicotte, Hugues, Li, Ying, Eckel-Passow, Jeanette E., Dasari, Surendra, Vedell, Peter T., Barman, Poulami, Wang, Liewei, Weinshiboum, Richard, Jen, Jin, Huang, Haojie, Kohli, Manish, Kocher, Jean-Pierre A.
Publicado no BMC Bioinformatics (2016)

Custom Gene Capture and Next Generation Sequencing to Resolve Discordant ALK Status by FISH and IHC in Lung Adenocarcinoma

Por Jang, Jin Sung, Wang, Xiaoke, Vedell, Peter T., Wen, Ji, Zhang, Jinghui, Ellison, David W., Evans, Jared M., Johnson, Sarah H., Yang, Ping, Sukov, William R., Oliveira, Andre, Vasmatzis, George, Sun, Zhifu, Jen, Jin, Yi, Eunhee S.
Publicado no J Thorac Oncol (2016)

Exome sequencing identifies MXRA5 as a novel cancer gene frequently mutated in non–small cell lung carcinoma from Chinese patients

Por Xiong, Donghai, Li, Guangming, Li, Kezhen, Xu, Qinzi, Pan, Zhongjie, Ding, Feng, Vedell, Peter, Liu, Pengyuan, Cui, Peng, Hua, Xing, Jiang, Hui, Yin, Yuxin, Zhu, Ze, Li, Xiaomian, Zhang, Bin, Ma, Ding, Wang, Yian, You, Ming
Publicado em 2012

PatternCNV: a versatile tool for detecting copy number changes from exome sequencing data

Por Wang, Chen, Evans, Jared M., Bhagwate, Aditya V., Prodduturi, Naresh, Sarangi, Vivekananda, Middha, Mridu, Sicotte, Hugues, Vedell, Peter T., Hart, Steven N., Oliver, Gavin R., Kocher, Jean-Pierre A., Maurer, Matthew J., Novak, Anne J., Slager, Susan L., Cerhan, James R., Asmann, Yan W.
Publicado em 2014

Determining the frequency of pathogenic germline variants from exome sequencing in patients with castrate-resistant prostate cancer

Por Hart, Steven N, Ellingson, Marissa S, Schahl, Kim, Vedell, Peter T, Carlson, Rachel E, Sinnwell, Jason P, Barman, Poulami, Sicotte, Hugues, Eckel-Passow, Jeanette E, Wang, Liguo, Kalari, Krishna R, Qin, Rui, Kruisselbrink, Teresa M, Jimenez, Rafael E, Bryce, Alan H, Tan, Winston, Weinshilboum, Richard, Wang, Liewei, Kohli, Manish
Publicado no BMJ Open (2016)

Mutational Landscapes of Sequential Prostate Metastases and Matched Patient Derived Xenografts during Enzalutamide Therapy

Por Kohli, Manish, Wang, Liguo, Xie, Fang, Sicotte, Hugues, Yin, Ping, Dehm, Scott M., Hart, Steven N., Vedell, Peter T., Barman, Poulami, Qin, Rui, Mahoney, Douglas W., Carlson, Rachel E., Eckel-Passow, Jeanette E., Atwell, Thomas D., Eiken, Patrick W., McMenomy, Brendan P., Wieben, Eric D., Jha, Gautam, Jimenez, Rafael E., Weinshilboum, Richard, Wang, Liewei
Publicado no PLoS One (2015)

Tumor Sequencing and Patient-Derived Xenografts in the Neoadjuvant Treatment of Breast Cancer

Por Goetz, Matthew P., Kalari, Krishna R., Suman, Vera J., Moyer, Ann M., Yu, Jia, Visscher, Daniel W., Dockter, Travis J., Vedell, Peter T., Sinnwell, Jason P., Tang, Xiaojia, Thompson, Kevin J., McLaughlin, Sarah A., Moreno-Aspitia, Alvaro, Copland, John A, Northfelt, Donald W., Gray, Richard J., Hunt, Katie, Conners, Amy, Weinshilboum, Richard, Wang, Liewei, Boughey, Judy C.
Publicado no J Natl Cancer Inst (2017)

Whole-genome sequencing identifies genomic heterogeneity at a nucleotide and chromosomal level in bladder cancer

Por Morrison, Carl D., Liu, Pengyuan, Woloszynska-Read, Anna, Zhang, Jianmin, Luo, Wei, Qin, Maochun, Bshara, Wiam, Conroy, Jeffrey M., Sabatini, Linda, Vedell, Peter, Xiong, Donghai, Liu, Song, Wang, Jianmin, Shen, He, Li, Yinwei, Omilian, Angela R., Hill, Annette, Head, Karen, Guru, Khurshid, Kunnev, Dimiter, Leach, Robert, Eng, Kevin H., Darlak, Christopher, Hoeflich, Christopher, Veeranki, Srividya, Glenn, Sean, You, Ming, Pruitt, Steven C., Johnson, Candace S., Trump, Donald L.
Publicado em 2014

Androgen receptor variant AR-V9 is co-expressed with AR-V7 in prostate cancer metastases and predicts abiraterone resistance

Por Kohli, Manish, Ho, Yeung, Hillman, David W., Van Etten, Jamie L., Henzler, Christine, Yang, Rendong, Sperger, Jamie M., Li, Yingming, Tseng, Elizabeth, Hon, Ting, Clark, Tyson, Tan, Winston, Carlson, Rachel E., Wang, Liguo, Sicotte, Hugues, Thai, Ho, Jimenez, Rafael, Huang, Haojie, Vedell, Peter T., Eckloff, Bruce W., Quevedo, Jorge F., Pitot, Henry C., Costello, Brian A., Jen, Jin, Wieben, Eric D., Silverstein, Kevin A.T., Lang, Joshua M., Wang, Liewei, Dehm, Scott M.
Publicado no Clin Cancer Res (2017)

Identification of somatic mutations in non-small cell lung carcinomas using whole-exome sequencing

Por Liu, Pengyuan, Morrison, Carl, Wang, Liang, Xiong, Donghai, Vedell, Peter, Cui, Peng, Hua, Xing, Ding, Feng, Lu, Yan, James, Michael, Ebben, John D., Xu, Haiming, Adjei, Alex A., Head, Karen, Andrae, Jaime W., Tschannen, Michael R., Jacob, Howard, Pan, Jing, Zhang, Qi, Van den Bergh, Francoise, Xiao, Haijie, Lo, Ken C., Patel, Jigar, Richmond, Todd, Watt, Mary-Anne, Albert, Thomas, Selzer, Rebecca, Anderson, Marshall, Wang, Jiang, Wang, Yian, Starnes, Sandra, Yang, Ping, You, Ming
Publicado em 2012

Exome sequencing reveals frequent deleterious germline variants in cancer susceptibility genes in women with invasive breast cancer undergoing neoadjuvant chemotherapy

Por Ellingson, Marissa S., Hart, Steven N., Kalari, Krishna R., Suman, Vera, Schahl, Kimberly A., Dockter, Travis J., Felten, Sara J., Sinnwell, Jason P., Thompson, Kevin J., Tang, Xiaojia, Vedell, Peter T., Barman, Poulami, Sicotte, Hugues, Eckel-Passow, Jeanette E., Northfelt, Donald W., Gray, Richard J., McLaughlin, Sarah A., Moreno-Aspitia, Alvaro, Ingle, James N., Moyer, Ann M., Visscher, Daniel W., Jones, Katie, Conners, Amy, McDonough, Michelle, Wieben, Eric D., Wang, Liewei, Weinshilboum, Richard, Boughey, Judy C., Goetz, Matthew P.
Publicado no Breast Cancer Res Treat (2015)