CHOYCE: a web server for constrained homology modelling with cryoEM maps

Por Rawi, Reda, Whitmore, Lee, Topf, Maya
Publicado em 2010

Inferential optimization for simultaneous fitting of multiple components into a cryoEM map of their assembly

Por Lasker, Keren, Topf, Maya, Sali, Andrej, Wolfson, Haim J.
Publicado em 2009

γ-TEMPy: Simultaneous Fitting of Components in 3D-EM Maps of Their Assembly Using a Genetic Algorithm

Por Pandurangan, Arun Prasad, Vasishtan, Daven, Alber, Frank, Topf, Maya
Publicado no Structure (2015)

A fast mathematical programming procedure for simultaneous fitting of assembly components into cryoEM density maps

Por Zhang, Shihua, Vasishtan, Daven, Xu, Min, Topf, Maya, Alber, Frank
Publicado em 2010

Combined approaches to flexible fitting and assessment in virus capsids undergoing conformational change()

Por Pandurangan, Arun Prasad, Shakeel, Shabih, Butcher, Sarah Jane, Topf, Maya
Publicado em 2014

The Importance of Non-accessible Crosslinks and Solvent Accessible Surface Distance in Modeling Proteins with Restraints From Crosslinking Mass Spectrometry

Por Bullock, Joshua Matthew Allen, Schwab, Jannik, Thalassinos, Konstantinos, Topf, Maya
Publicado no Mol Cell Proteomics (2016)

Conformational States of Macromolecular Assemblies Explored by Integrative Structure Calculation

Por Thalassinos, Konstantinos, Pandurangan, Arun Prasad, Xu, Min, Alber, Frank, Topf, Maya
Publicado em 2013

Protein Structure Fitting and Refinement Guided by cryoEM Density

Por Topf, Maya, Lasker, Keren, Webb, Ben, Wolfson, Haim, Chiu, Wah, Sali, Andrej
Publicado em 2008

Changes in Apaf-1 conformation that drive apoptosome assembly

Por Yuan, Shujun, Topf, Maya, Reubold, Thomas F., Eschenburg, Susanne, Akey, Christopher W.
Publicado em 2013

Mechanism of eIF6-mediated Inhibition of Ribosomal Subunit Joining

Por Gartmann, Marco, Blau, Michael, Armache, Jean-Paul, Mielke, Thorsten, Topf, Maya, Beckmann, Roland
Publicado em 2010

Structure of an apoptosome-procaspase-9 CARD complex

Por Yuan, Shujun, Yu, Xinchao, Topf, Maya, Ludtke, Steven J., Wang, Xiaodong, Akey, Christopher W.
Publicado em 2010

Exploring the Spatial and Temporal Organization of a Cell’s Proteome

Por Beck, Martin, Topf, Maya, Frazier, Zachary, Tjong, Harianto, Xu, Min, Zhang, Shihua, Alber, Frank
Publicado em 2010

Collaborative Computational Project for Electron cryo-Microscopy

Por Wood, Chris, Burnley, Tom, Patwardhan, Ardan, Scheres, Sjors, Topf, Maya, Roseman, Alan, Winn, Martyn
Publicado no Acta Crystallogr D Biol Crystallogr (2015)

TEMPy: a Python library for assessment of three-dimensional electron microscopy density fits

Por Farabella, Irene, Vasishtan, Daven, Joseph, Agnel Praveen, Pandurangan, Arun Prasad, Sahota, Harpal, Topf, Maya
Publicado no J Appl Crystallogr (2015)

Crystallographic Conformers of Actin in a Biologically Active Bundle of Filaments

Por Cong, Yao, Topf, Maya, Sali, Andrej, Matsudaira, Paul, Dougherty, Matthew, Chiu, Wah, Schmid, Michael F.
Publicado em 2007

Structure of the Drosophila apoptosome at 6.9Å resolution

Por Yuan, Shujun, Yu, Xinchao, Topf, Maya, Dorstyn, Loretta, Kumar, Sharad, Ludtke, Steven J., Akey, Christopher W.
Publicado em 2011

Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins

Por Atherton, Joseph, Farabella, Irene, Yu, I-Mei, Rosenfeld, Steven S, Houdusse, Anne, Topf, Maya, Moores, Carolyn A
Publicado no eLife (2014)

Refinement of atomic models in high resolution EM reconstructions using Flex-EM and local assessment

Por Joseph, Agnel Praveen, Malhotra, Sony, Burnley, Tom, Wood, Chris, Clare, Daniel K., Winn, Martyn, Topf, Maya
Publicado no Methods (2016)

Structure of the Mammalian 80S Ribosome at 8.7Å Resolution

Por Chandramouli, Preethi, Topf, Maya, Ménétret, Jean-François, Eswar, Narayanan, Gutell, Robin R., Sali, Andrej, Akey, Christopher W.
Publicado em 2008

Mechanism of lid closure in the eukaryotic chaperonin TRiC/CCT

Por Booth, Christopher R, Meyer, Anne S, Cong, Yao, Topf, Maya, Sali, Andrej, Ludtke, Steven J, Chiu, Wah, Frydman, Judith
Publicado em 2008