Genome Environment Browser (GEB): a dynamic browser for visualising high-throughput experimental data in the context of genome features

Por Huntley, Derek, Tang, Y Amy, Nesterova, Tatyana B, Butcher, Sarah, Brockdorff, Neil
Publicado em 2008

Efficiency of Xist-mediated silencing on autosomes is linked to chromosomal domain organisation

Por Tang, Y Amy, Huntley, Derek, Montana, Giovanni, Cerase, Andrea, Nesterova, Tatyana B, Brockdorff, Neil
Publicado em 2010

The RNASeq-er API—a gateway to systematically updated analysis of public RNA-seq data

Por Petryszak, Robert, Fonseca, Nuno A, Füllgrabe, Anja, Huerta, Laura, Keays, Maria, Tang, Y Amy, Brazma, Alvis
Publicado no Bioinformatics (2017)

Epigenetic Functions of Smchd1 Repress Gene Clusters on the Inactive X Chromosome and on Autosomes

Por Gendrel, Anne-Valerie, Tang, Y. Amy, Suzuki, Masako, Godwin, Jonathan, Nesterova, Tatyana B., Greally, John M., Heard, Edith, Brockdorff, Neil
Publicado em 2013

Dicer regulates <it>Xist </it>promoter methylation in ES cells indirectly through transcriptional control of Dnmt3a

Por Nesterova Tatyana B, Popova Bilyana C, Cobb Bradley S, Norton Sara, Senner Claire E, Tang Y Amy, Spruce Thomas, Rodriguez Tristan A, Sado Takashi, Merkenschlager Matthias, Brockdorff Neil
Publicado em 2008-10-01

Dicer regulates Xist promoter methylation in ES cells indirectly through transcriptional control of Dnmt3a

Por Nesterova, Tatyana B, Popova, Bilyana C, Cobb, Bradley S, Norton, Sara, Senner, Claire E, Tang, Y Amy, Spruce, Thomas, Rodriguez, Tristan A, Sado, Takashi, Merkenschlager, Matthias, Brockdorff, Neil
Publicado em 2008

Smchd1-Dependent and -Independent Pathways Determine Developmental Dynamics of CpG Island Methylation on the Inactive X Chromosome

Por Gendrel, Anne-Valerie, Apedaile, Anwyn, Coker, Heather, Termanis, Ausma, Zvetkova, Ilona, Godwin, Jonathan, Tang, Y. Amy, Huntley, Derek, Montana, Giovanni, Taylor, Steven, Giannoulatou, Eleni, Heard, Edith, Stancheva, Irina, Brockdorff, Neil
Publicado em 2012

Spatial separation of Xist RNA and polycomb proteins revealed by superresolution microscopy

Por Cerase, Andrea, Smeets, Daniel, Tang, Y. Amy, Gdula, Michal, Kraus, Felix, Spivakov, Mikhail, Moindrot, Benoit, Leleu, Marion, Tattermusch, Anna, Demmerle, Justin, Nesterova, Tatyana B., Green, Catherine, Otte, Arie P., Schermelleh, Lothar, Brockdorff, Neil
Publicado em 2014

ArrayExpress update—simplifying data submissions

Por Kolesnikov, Nikolay, Hastings, Emma, Keays, Maria, Melnichuk, Olga, Tang, Y. Amy, Williams, Eleanor, Dylag, Miroslaw, Kurbatova, Natalja, Brandizi, Marco, Burdett, Tony, Megy, Karyn, Pilicheva, Ekaterina, Rustici, Gabriella, Tikhonov, Andrew, Parkinson, Helen, Petryszak, Robert, Sarkans, Ugis, Brazma, Alvis
Publicado no Nucleic Acids Res (2014)

Expression Atlas: gene and protein expression across multiple studies and organisms

Por Papatheodorou, Irene, Fonseca, Nuno A, Keays, Maria, Tang, Y Amy, Barrera, Elisabet, Bazant, Wojciech, Burke, Melissa, Füllgrabe, Anja, Fuentes, Alfonso Muñoz-Pomer, George, Nancy, Huerta, Laura, Koskinen, Satu, Mohammed, Suhaib, Geniza, Matthew, Preece, Justin, Jaiswal, Pankaj, Jarnuczak, Andrew F, Huber, Wolfgang, Stegle, Oliver, Vizcaino, Juan Antonio, Brazma, Alvis, Petryszak, Robert
Publicado no Nucleic Acids Res (2018)

Expression Atlas update—an integrated database of gene and protein expression in humans, animals and plants

Por Petryszak, Robert, Keays, Maria, Tang, Y. Amy, Fonseca, Nuno A., Barrera, Elisabet, Burdett, Tony, Füllgrabe, Anja, Fuentes, Alfonso Muñoz-Pomer, Jupp, Simon, Koskinen, Satu, Mannion, Oliver, Huerta, Laura, Megy, Karine, Snow, Catherine, Williams, Eleanor, Barzine, Mitra, Hastings, Emma, Weisser, Hendrik, Wright, James, Jaiswal, Pankaj, Huber, Wolfgang, Choudhary, Jyoti, Parkinson, Helen E., Brazma, Alvis
Publicado no Nucleic Acids Res (2016)

ArrayExpress update—trends in database growth and links to data analysis tools

Por Rustici, Gabriella, Kolesnikov, Nikolay, Brandizi, Marco, Burdett, Tony, Dylag, Miroslaw, Emam, Ibrahim, Farne, Anna, Hastings, Emma, Ison, Jon, Keays, Maria, Kurbatova, Natalja, Malone, James, Mani, Roby, Mupo, Annalisa, Pedro Pereira, Rui, Pilicheva, Ekaterina, Rung, Johan, Sharma, Anjan, Tang, Y. Amy, Ternent, Tobias, Tikhonov, Andrew, Welter, Danielle, Williams, Eleanor, Brazma, Alvis, Parkinson, Helen, Sarkans, Ugis
Publicado em 2013

The Ensembl gene annotation system

Por Aken, Bronwen L., Ayling, Sarah, Barrell, Daniel, Clarke, Laura, Curwen, Valery, Fairley, Susan, Fernandez Banet, Julio, Billis, Konstantinos, García Girón, Carlos, Hourlier, Thibaut, Howe, Kevin, Kähäri, Andreas, Kokocinski, Felix, Martin, Fergal J., Murphy, Daniel N., Nag, Rishi, Ruffier, Magali, Schuster, Michael, Tang, Y. Amy, Vogel, Jan-Hinnerk, White, Simon, Zadissa, Amonida, Flicek, Paul, Searle, Stephen M. J.
Publicado no Database (Oxford) (2016)

Gramene 2016: comparative plant genomics and pathway resources

Por Tello-Ruiz, Marcela K., Stein, Joshua, Wei, Sharon, Preece, Justin, Olson, Andrew, Naithani, Sushma, Amarasinghe, Vindhya, Dharmawardhana, Palitha, Jiao, Yinping, Mulvaney, Joseph, Kumari, Sunita, Chougule, Kapeel, Elser, Justin, Wang, Bo, Thomason, James, Bolser, Daniel M., Kerhornou, Arnaud, Walts, Brandon, Fonseca, Nuno A., Huerta, Laura, Keays, Maria, Tang, Y. Amy, Parkinson, Helen, Fabregat, Antonio, McKay, Sheldon, Weiser, Joel, D'Eustachio, Peter, Stein, Lincoln, Petryszak, Robert, Kersey, Paul J., Jaiswal, Pankaj, Ware, Doreen
Publicado no Nucleic Acids Res (2016)

Ensembl 2011

Por Flicek, Paul, Amode, M. Ridwan, Barrell, Daniel, Beal, Kathryn, Brent, Simon, Chen, Yuan, Clapham, Peter, Coates, Guy, Fairley, Susan, Fitzgerald, Stephen, Gordon, Leo, Hendrix, Maurice, Hourlier, Thibaut, Johnson, Nathan, Kähäri, Andreas, Keefe, Damian, Keenan, Stephen, Kinsella, Rhoda, Kokocinski, Felix, Kulesha, Eugene, Larsson, Pontus, Longden, Ian, McLaren, William, Overduin, Bert, Pritchard, Bethan, Riat, Harpreet Singh, Rios, Daniel, Ritchie, Graham R. S., Ruffier, Magali, Schuster, Michael, Sobral, Daniel, Spudich, Giulietta, Tang, Y. Amy, Trevanion, Stephen, Vandrovcova, Jana, Vilella, Albert J., White, Simon, Wilder, Steven P., Zadissa, Amonida, Zamora, Jorge, Aken, Bronwen L., Birney, Ewan, Cunningham, Fiona, Dunham, Ian, Durbin, Richard, Fernández-Suarez, Xosé M., Herrero, Javier, Hubbard, Tim J. P., Parker, Anne, Proctor, Glenn, Vogel, Jan, Searle, Stephen M. J.
Publicado em 2011

Ensembl’s 10th year

Por Flicek, Paul, Aken, Bronwen L., Ballester, Benoit, Beal, Kathryn, Bragin, Eugene, Brent, Simon, Chen, Yuan, Clapham, Peter, Coates, Guy, Fairley, Susan, Fitzgerald, Stephen, Fernandez-Banet, Julio, Gordon, Leo, Gräf, Stefan, Haider, Syed, Hammond, Martin, Howe, Kerstin, Jenkinson, Andrew, Johnson, Nathan, Kähäri, Andreas, Keefe, Damian, Keenan, Stephen, Kinsella, Rhoda, Kokocinski, Felix, Koscielny, Gautier, Kulesha, Eugene, Lawson, Daniel, Longden, Ian, Massingham, Tim, McLaren, William, Megy, Karine, Overduin, Bert, Pritchard, Bethan, Rios, Daniel, Ruffier, Magali, Schuster, Michael, Slater, Guy, Smedley, Damian, Spudich, Giulietta, Tang, Y. Amy, Trevanion, Stephen, Vilella, Albert, Vogel, Jan, White, Simon, Wilder, Steven P., Zadissa, Amonida, Birney, Ewan, Cunningham, Fiona, Dunham, Ian, Durbin, Richard, Fernández-Suarez, Xosé M., Herrero, Javier, Hubbard, Tim J. P., Parker, Anne, Proctor, Glenn, Smith, James, Searle, Stephen M. J.
Publicado em 2010

Open Targets: a platform for therapeutic target identification and validation

Por Koscielny, Gautier, An, Peter, Carvalho-Silva, Denise, Cham, Jennifer A., Fumis, Luca, Gasparyan, Rippa, Hasan, Samiul, Karamanis, Nikiforos, Maguire, Michael, Papa, Eliseo, Pierleoni, Andrea, Pignatelli, Miguel, Platt, Theo, Rowland, Francis, Wankar, Priyanka, Bento, A. Patrícia, Burdett, Tony, Fabregat, Antonio, Forbes, Simon, Gaulton, Anna, Gonzalez, Cristina Yenyxe, Hermjakob, Henning, Hersey, Anne, Jupe, Steven, Kafkas, Şenay, Keays, Maria, Leroy, Catherine, Lopez, Francisco-Javier, Magarinos, Maria Paula, Malone, James, McEntyre, Johanna, Munoz-Pomer Fuentes, Alfonso, O'Donovan, Claire, Papatheodorou, Irene, Parkinson, Helen, Palka, Barbara, Paschall, Justin, Petryszak, Robert, Pratanwanich, Naruemon, Sarntivijal, Sirarat, Saunders, Gary, Sidiropoulos, Konstantinos, Smith, Thomas, Sondka, Zbyslaw, Stegle, Oliver, Tang, Y. Amy, Turner, Edward, Vaughan, Brendan, Vrousgou, Olga, Watkins, Xavier, Martin, Maria-Jesus, Sanseau, Philippe, Vamathevan, Jessica, Birney, Ewan, Barrett, Jeffrey, Dunham, Ian
Publicado no Nucleic Acids Res (2017)

Ensembl 2012

Por Flicek, Paul, Amode, M. Ridwan, Barrell, Daniel, Beal, Kathryn, Brent, Simon, Carvalho-Silva, Denise, Clapham, Peter, Coates, Guy, Fairley, Susan, Fitzgerald, Stephen, Gil, Laurent, Gordon, Leo, Hendrix, Maurice, Hourlier, Thibaut, Johnson, Nathan, Kähäri, Andreas K., Keefe, Damian, Keenan, Stephen, Kinsella, Rhoda, Komorowska, Monika, Koscielny, Gautier, Kulesha, Eugene, Larsson, Pontus, Longden, Ian, McLaren, William, Muffato, Matthieu, Overduin, Bert, Pignatelli, Miguel, Pritchard, Bethan, Riat, Harpreet Singh, Ritchie, Graham R. S., Ruffier, Magali, Schuster, Michael, Sobral, Daniel, Tang, Y. Amy, Taylor, Kieron, Trevanion, Stephen, Vandrovcova, Jana, White, Simon, Wilson, Mark, Wilder, Steven P., Aken, Bronwen L., Birney, Ewan, Cunningham, Fiona, Dunham, Ian, Durbin, Richard, Fernández-Suarez, Xosé M., Harrow, Jennifer, Herrero, Javier, Hubbard, Tim J. P., Parker, Anne, Proctor, Glenn, Spudich, Giulietta, Vogel, Jan, Yates, Andy, Zadissa, Amonida, Searle, Stephen M. J.
Publicado em 2012

Insights into hominid evolution from the gorilla genome sequence

Por Scally, Aylwyn, Dutheil, Julien Y., Hillier, LaDeana W., Jordan, Greg E., Goodhead, Ian, Herrero, Javier, Hobolth, Asger, Lappalainen, Tuuli, Mailund, Thomas, Marques-Bonet, Tomas, McCarthy, Shane, Montgomery, Stephen H., Schwalie, Petra C., Tang, Y. Amy, Ward, Michelle C., Xue, Yali, Yngvadottir, Bryndis, Alkan, Can, Andersen, Lars N., Ayub, Qasim, Ball, Edward V., Beal, Kathryn, Bradley, Brenda J., Chen, Yuan, Clee, Chris M., Fitzgerald, Stephen, Graves, Tina A., Gu, Yong, Heath, Paul, Heger, Andreas, Karakoc, Emre, Kolb-Kokocinski, Anja, Laird, Gavin K., Lunter, Gerton, Meader, Stephen, Mort, Matthew, Mullikin, James C., Munch, Kasper, O’Connor, Timothy D., Phillips, Andrew D., Prado-Martinez, Javier, Rogers, Anthony S., Sajjadian, Saba, Schmidt, Dominic, Shaw, Katy, Simpson, Jared T., Stenson, Peter D., Turner, Daniel J., Vigilant, Linda, Vilella, Albert J., Whitener, Weldon, Zhu, Baoli, Cooper, David N., de Jong, Pieter, Dermitzakis, Emmanouil T., Eichler, Evan E., Flicek, Paul, Goldman, Nick, Mundy, Nicholas I., Ning, Zemin, Odom, Duncan T., Ponting, Chris P., Quail, Michael A., Ryder, Oliver A., Searle, Stephen M., Warren, Wesley C., Wilson, Richard K., Schierup, Mikkel H., Rogers, Jane, Tyler-Smith, Chris, Durbin, Richard
Publicado em 2012