Determining Frequent Patterns of Copy Number Alterations in Cancer

par Rapaport, Franck, Leslie, Christina
Publié 2010

Classification of arrayCGH data using fused SVM

par Rapaport, Franck, Barillot, Emmanuel, Vert, Jean-Philippe
Publié 2008

Classification of microarray data using gene networks

par Dutreix Marie, Zinovyev Andrei, Rapaport Franck, Barillot Emmanuel, Vert Jean-Philippe
Publié 2007-02-01

Classification of microarray data using gene networks

par Rapaport, Franck, Zinovyev, Andrei, Dutreix, Marie, Barillot, Emmanuel, Vert, Jean-Philippe
Publié 2007

Response to Zhou and Robinson

par Betel, Doron, Socci, Nicholas D., Khanin, Raya, Mason, Christopher E., Rapaport, Franck
Publié dans Genome Biol (2015)

PopViz: a webserver for visualizing minor allele frequencies and damage prediction scores of human genetic variations

par Zhang, Peng, Bigio, Benedetta, Rapaport, Franck, Zhang, Shen-Ying, Casanova, Jean-Laurent, Abel, Laurent, Boisson, Bertrand, Itan, Yuval
Publié dans Bioinformatics (2018)

Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data

par Rapaport, Franck, Khanin, Raya, Liang, Yupu, Pirun, Mono, Krek, Azra, Zumbo, Paul, Mason, Christopher E, Socci, Nicholas D, Betel, Doron
Publié 2013

Erratum to: Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data

par Rapaport, Franck, Khanin, Raya, Liang, Yupu, Pirun, Mono, Krek, Azra, Zumbo, Paul, Mason, Christopher E., Socci, Nicholas D., Betel, Doron
Publié dans Genome Biol (2015)

Risk of Disease Progression in Low-Risk MDS is Linked to Distinct Epigenetic Subtypes

par Qin, Tingting, Sotzen, Jason, Rampal, Raajit K., Rapaport, Franck T., Levine, Ross L., Klimek, Virginia, Nimer, Stephen D., Figueroa, Maria E.
Publié dans Leukemia (2019)

Genetic analysis of five children with essential thrombocytosis identified mutations in cancer-associated genes with roles in transcriptional regulation

par Kucine, Nicole, Viny, Aaron D., Rampal, Raajit, Berger, Michael, Socci, Nicholas, Viale, Agnes, Bussel, James B., Levine, Ross L., Rapaport, Franck
Publié dans Haematologica (2016)

Common homozygosity for predicted loss-of-function variants reveals both redundant and advantageous effects of dispensable human genes

par Rausell, Antonio, Luo, Yufei, Lopez, Marie, Seeleuthner, Yoann, Rapaport, Franck, Favier, Antoine, Stenson, Peter D., Cooper, David N., Patin, Etienne, Casanova, Jean-Laurent, Quintana-Murci, Lluis, Abel, Laurent
Publié dans Proc Natl Acad Sci U S A (2020)

Varicella-zoster virus CNS vasculitis and RNA polymerase III gene mutation in identical twins

par Carter-Timofte, Madalina E., Hansen, Anders F., Mardahl, Maibritt, Fribourg, Sébastien, Rapaport, Franck, Zhang, Shen-Ying, Casanova, Jean-Laurent, Paludan, Søren R., Christiansen, Mette, Larsen, Carsten S., Mogensen, Trine H.
Publié dans Neurol Neuroimmunol Neuroinflamm (2018)

Telomere Length and Associations with Somatic Mutations and Clinical Outcomes in Acute Myeloid Leukemia

par Watts, Justin M., Dumitriu, Bogdan, Hilden, Patrick, Kishtagari, Ashwin, Rapaport, Franck, Chen, Christina, Ahn, Jihae, Devlin, Sean M., Stein, Eytan M., Rampal, Raajit, Levine, Ross L., Young, Neal, Tallman, Martin S.
Publié dans Leuk Res (2016)

Aid is a key regulator of myeloid/erythroid differentiation and DNA methylation in hematopoietic stem/progenitor cells

par Kunimoto, Hiroyoshi, McKenney, Anna Sophia, Meydan, Cem, Shank, Kaitlyn, Nazir, Abbas, Rapaport, Franck, Durham, Benjamin, Garrett-Bakelman, Francine E., Pronier, Elodie, Shih, Alan H., Melnick, Ari, Chaudhuri, Jayanta, Levine, Ross L.
Publié dans Blood (2017)

Analysis of tumor- and stroma-supplied proteolytic networks reveals a brain metastasis-promoting role for cathepsin S

par Sevenich, Lisa, Bowman, Robert L., Mason, Steven D., Quail, Daniela F., Rapaport, Franck, Elie, Benelita T., Brogi, Edi, Brastianos, Priscilla K., Hahn, William C., Holsinger, Leslie J., Massagué, Joan, Leslie, Christina S., Joyce, Johanna A.
Publié dans Nat Cell Biol (2014)

Cooperative Epigenetic Remodeling by TET2 Loss and NRAS Mutation Drives Myeloid Transformation and MEK Inhibitor Sensitivity

par Kunimoto, Hiroyoshi, Meydan, Cem, Nazir, Abbas, Whitfield, Justin, Shank, Kaitlyn, Rapaport, Franck, Maher, Rebecca, Pronier, Elodie, Meyer, Sara C., Garrett-Bakelman, Francine E., Tallman, Martin, Melnick, Ari, Levine, Ross L., Shih, Alan H.
Publié dans Cancer Cell (2017)

Negative selection on human genes underlying inborn errors depends on disease outcome and both the mode and mechanism of inheritance

par Rapaport, Franck, Boisson, Bertrand, Gregor, Anne, Béziat, Vivien, Boisson-Dupuis, Stéphanie, Bustamante, Jacinta, Jouanguy, Emmanuelle, Puel, Anne, Rosain, Jérémie, Zhang, Qian, Zhang, Shen-Ying, Gleeson, Joseph G., Quintana-Murci, Lluis, Casanova, Jean-Laurent, Abel, Laurent, Patin, Etienne
Publié dans Proc Natl Acad Sci U S A (2021)

Somatic mutations in leukocytes infiltrating primary breast cancers

par Kleppe, Maria, Comen, Elizabeth, Wen, Hannah Y, Bastian, Lennart, Blum, Brian, Rapaport, Franck T, Keller, Matthew, Granot, Zvika, Socci, Nicolas, Viale, Agnès, You, Daoqi, Benezra, Robert, Weigelt, Britta, Brogi, Edi, Berger, Michael F, Reis-Filho, Jorge S, Levine, Ross L, Norton, Larry
Publié dans NPJ Breast Cancer (2015)

Jak1 Integrates Cytokine Sensing to Regulate Hematopoietic Stem Cell Function and Stress Hematopoiesis

par Kleppe, Maria, Spitzer, Matthew H., Li, Sheng, Hill, Corinne E., Dong, Lauren, Papalexi, Efthymia, De Groote, Sofie, Bowman, Robert L., Keller, Matthew, Koppikar, Priya, Rapaport, Franck T., Teruya-Feldstein, Julie, Gandara, Jorge, Mason, Christopher E., Nolan, Garry P., Levine, Ross L.
Publié dans Cell Stem Cell (2017)

Jak1 Integrates Cytokine Sensing to Regulate Hematopoietic Stem Cell Function and Stress Hematopoiesis

par Kleppe, Maria, Spitzer, Matthew H., Li, Sheng, Hill, Corinne E., Dong, Lauren, Papalexi, Efthymia, De Groote, Sofie, Bowman, Robert L., Keller, Matthew, Koppikar, Priya, Rapaport, Franck T., Teruya-Feldstein, Julie, Gandara, Jorge, Mason, Christopher E., Nolan, Garry P., Levine, Ross L.
Publié dans Cell Stem Cell (2018)