Reliable allele detection using SNP-based PCR primers containing Locked Nucleic Acid: application in genetic mapping

od Trognitz Friederike, Nakitandwe Joy, Trognitz Bodo
Izdano 2007-02-01

Reliable allele detection using SNP-based PCR primers containing Locked Nucleic Acid: application in genetic mapping

od Nakitandwe, Joy, Trognitz, Friederike, Trognitz, Bodo
Izdano 2007

Induction, rapid fixation and retention of mutations in vegetatively propagated banana

od Jankowicz-Cieslak, Joanna, Huynh, Owen A, Brozynska, Marta, Nakitandwe, Joy, Till, Bradley J
Izdano 2012

Haploinsufficient loss of multiple 5q genes may fine-tune Wnt signaling in del(5q) therapy-related myeloid neoplasms

od Stoddart, Angela, Nakitandwe, Joy, Chen, Shann-Ching, Downing, James R., Le Beau, Michelle M.
Izdano u Blood (2015)

Knockdown of Hnrnpa0, a del(5q) gene, alters myeloid cell fate in murine cells through regulation of AU-rich transcripts

od Young, David J., Stoddart, Angela, Nakitandwe, Joy, Chen, Shann-Ching, Qian, Zhijian, Downing, James R., Le Beau, Michelle M.
Izdano 2014

Endemic SARS-CoV-2 Polymorphisms Can Cause a Higher Diagnostic Target Failure Rate than Estimated by Aggregate Global Sequencing Data

od Rhoads, Daniel D., Plunkett, David, Nakitandwe, Joy, Dempsey, Andrew, Tu, Zheng Jin, Procop, Gary W., Bosler, David, Rubin, Brian P., Loeffelholz, Michael J., Brock, Jay E.
Izdano u J Clin Microbiol (2021)

Dominant Role of Oncogene Dosage and Absence of Tumor Suppressor Activity in Nras-Driven Hematopoietic Transformation

od Xu, Jin, Haigis, Kevin M., Firestone, Ari J., McNerney, Megan E., Li, Qing, Davis, Elizabeth, Chen, Shann-Ching, Nakitandwe, Joy, Downing, James, Jacks, Tyler, Le Beau, Michelle M., Shannon, Kevin
Izdano 2013

Convergent genetic aberrations in murine and human T lineage acute lymphoblastic leukemias

od Huang, Benjamin J., Wandler, Anica M., Meyer, Lauren K., Dail, Monique, Daemen, Anneleen, Sampath, Deepak, Li, Qing, Wang, Xinyue, Wong, Jasmine C., Nakitandwe, Joy, Downing, James R., Zhang, Jinghui, Taylor, Barry S., Shannon, Kevin
Izdano u PLoS Genet (2019)

Loss of Oncogenic Notch1 with Resistance to a PI3K Inhibitor in T Cell Leukaemia

od Dail, Monique, Wong, Jason, Lawrence, Jessica, O’Connor, Daniel, Nakitandwe, Joy, Chen, Shann-Ching, Xu, Jin, Lee, Leslie B, Akagi, Keiko, Li, Qing, Aster, Jon C., Pear, Warren S., Downing, James R, Sampath, Deepak, Shannon, Kevin
Izdano 2014

PTEN action in leukemia dictated by the tissue microenvironment

od Miething, Cornelius, Scuoppo, Claudio, Bosbach, Benedikt, Appelmann, Iris, Nakitandwe, Joy, Ma, Jing, Wu, Gang, Lintault, Laura, Auer, Martina, Premsrirut, Prem K., Teruya-Feldstein, Julie, Hicks, James, Benveniste, Helene, Speicher, Michael R., Downing, James R., Lowe, Scott W.
Izdano 2014

Functional evidence implicating chromosome 7q22 haploinsufficiency in myelodysplastic syndrome pathogenesis

od Wong, Jasmine C, Weinfurtner, Kelley M, Alzamora, Maria del pilar, Kogan, Scott C, Burgess, Michael R, Zhang, Yan, Nakitandwe, Joy, Ma, Jing, Cheng, Jinjun, Chen, Shann-Ching, Ho, Theodore T, Flach, Johanna, Reynaud, Damien, Passegué, Emmanuelle, Downing, James R, Shannon, Kevin
Izdano u eLife (2015)

Analysis of error profiles in deep next-generation sequencing data

od Ma, Xiaotu, Shao, Ying, Tian, Liqing, Flasch, Diane A., Mulder, Heather L., Edmonson, Michael N., Liu, Yu, Chen, Xiang, Newman, Scott, Nakitandwe, Joy, Li, Yongjin, Li, Benshang, Shen, Shuhong, Wang, Zhaoming, Shurtleff, Sheila, Robison, Leslie L., Levy, Shawn, Easton, John, Zhang, Jinghui
Izdano u Genome Biol (2019)

SequencErr: measuring and suppressing sequencer errors in next-generation sequencing data

od Davis, Eric M., Sun, Yu, Liu, Yanling, Kolekar, Pandurang, Shao, Ying, Szlachta, Karol, Mulder, Heather L., Ren, Dongren, Rice, Stephen V., Wang, Zhaoming, Nakitandwe, Joy, Gout, Alexander M., Shaner, Bridget, Hall, Salina, Robison, Leslie L., Pounds, Stanley, Klco, Jeffery M., Easton, John, Ma, Xiaotu
Izdano u Genome Biol (2021)

CONSERTING: integrating copy number analysis with structural variation detection

od Chen, Xiang, Gupta, Pankaj, Wang, Jianmin, Nakitandwe, Joy, Roberts, Kathryn, Dalton, James D., Parker, Matthew, Patel, Samir, Holmfeldt, Linda, Payne, Debbie, Easton, John, Ma, Jing, Rusch, Michael, Wu, Gang, Patel, Aman, J. Baker, Suzanne, Dyer, Michael A., Shurtleff, Sheila, Espy, Stephen, Pounds, Stanley, Downing, James R., Ellison, David W., Mullighan, Charles G., Zhang, Jinghui
Izdano u Nat Methods (2015)

Loss of Glucocorticoid Receptor Expression Mediates in Vivo Dexamethasone Resistance in T-cell Acute Lymphoblastic Leukemia

od Wandler, Anica M., Huang, Benjamin J., Craig, Jeffrey W., Hayes, Kathryn, Yan, Hannah, Meyer, Lauren K., Scacchetti, Alessandro, Monsalve, Gabriela, Dail, Monique, Li, Qing, Wong, Jasmine C., Weinberg, Olga, Hasserjian, Robert P., Kogan, Scott C., Jonsson, Philip, Yamamoto, Keith, Sampath, Deepak, Nakitandwe, Joy, Downing, James R., Zhang, Jinghui, Aster, Jon C., Taylor, Barry S., Shannon, Kevin
Izdano u Leukemia (2020)

Pan-neuroblastoma analysis reveals age- and signature-associated driver alterations

od Brady, Samuel W., Liu, Yanling, Ma, Xiaotu, Gout, Alexander M., Hagiwara, Kohei, Zhou, Xin, Wang, Jian, Macias, Michael, Chen, Xiaolong, Easton, John, Mulder, Heather L., Rusch, Michael, Wang, Lu, Nakitandwe, Joy, Lei, Shaohua, Davis, Eric M., Naranjo, Arlene, Cheng, Cheng, Maris, John M., Downing, James R., Cheung, Nai-Kong V., Hogarty, Michael D., Dyer, Michael A., Zhang, Jinghui
Izdano u Nat Commun (2020)

Enrichment of heterozygous germline RECQL4 loss-of-function variants in pediatric osteosarcoma

od Maciaszek, Jamie L., Oak, Ninad, Chen, Wenan, Hamilton, Kayla V., McGee, Rose B., Nuccio, Regina, Mostafavi, Roya, Hines-Dowell, Stacy, Harrison, Lynn, Taylor, Leslie, Gerhardt, Elsie L., Ouma, Annastasia, Edmonson, Michael N., Patel, Aman, Nakitandwe, Joy, Pappo, Alberto S., Azzato, Elizabeth M., Shurtleff, Sheila A., Ellison, David W., Downing, James R., Hudson, Melissa M., Robison, Leslie L., Santana, Victor, Newman, Scott, Zhang, Jinghui, Wang, Zhaoming, Wu, Gang, Nichols, Kim E., Kesserwan, Chimene A.
Izdano u Cold Spring Harb Mol Case Stud (2019)

Clinical cancer genomic profiling by three-platform sequencing of whole genome, whole exome and transcriptome

od Rusch, Michael, Nakitandwe, Joy, Shurtleff, Sheila, Newman, Scott, Zhang, Zhaojie, Edmonson, Michael N., Parker, Matthew, Jiao, Yuannian, Ma, Xiaotu, Liu, Yanling, Gu, Jiali, Walsh, Michael F., Becksfort, Jared, Thrasher, Andrew, Li, Yongjin, McMurry, James, Hedlund, Erin, Patel, Aman, Easton, John, Yergeau, Donald, Vadodaria, Bhavin, Tatevossian, Ruth G., Raimondi, Susana, Hedges, Dale, Chen, Xiang, Hagiwara, Kohei, McGee, Rose, Robinson, Giles W., Klco, Jeffery M., Gruber, Tanja A., Ellison, David W., Downing, James R, Zhang, Jinghui
Izdano u Nat Commun (2018)

The landscape of somatic mutations in Infant MLL rearranged acute lymphoblastic leukemias

od Andersson, Anna K, Ma, Jing, Wang, Jianmin, Chen, Xiang, Gedman, Amanda Larson, Dang, Jinjun, Nakitandwe, Joy, Holmfeldt, Linda, Parker, Matthew, Easton, John, Huether, Robert, Kriwacki, Richard, Rusch, Michael, Wu, Gang, Li, Yongjin, Mulder, Heather, Raimondi, Susana, Pounds, Stanley, Kang, Guolian, Shi, Lei, Becksfort, Jared, Gupta, Pankaj, Payne-Turner, Debbie, Vadodaria, Bhavin, Boggs, Kristy, Yergeau, Donald, Manne, Jayanthi, Song, Guangchun, Edmonson, Michael, Nagahawatte, Panduka, Wei, Lei, Cheng, Cheng, Pei, Deqing, Sutton, Rosemary, Venn, Nicola C, Chetcuti, Albert, Rush, Amanda, Catchpoole, Daniel, Heldrup, Jesper, Fioretos, Thoas, Lu, Charles, Ding, Li, Pui, Ching-Hon, Shurtleff, Sheila, Mullighan, Charles G, Mardis, Elaine R, Wilson, Richard K, Gruber, Tanja A, Zhang, Jinghui, Downing, James R
Izdano u Nat Genet (2015)

Diverse and Targetable Kinase Alterations Drive Histiocytic Neoplasms

od Diamond, Eli L., Durham, Benjamin H., Haroche, Julien, Yao, Zhan, Ma, Jing, Parikh, Sameer A., Wang, Zhaoming, Choi, John, Kim, Eunhee, Cohen-Aubart, Fleur, Lee, Stanley Chun-Wei, Gao, Yijun, Micol, Jean-Baptiste, Campbell, Patrick, Walsh, Michael P., Sylvester, Brooke, Dolgalev, Igor, Aminova, Olga, Heguy, Adriana, Zappile, Paul, Nakitandwe, Joy, Ganzel, Chezi, Dalton, James D., Ellison, David W., Estrada-Veras, Juvianee, Lacouture, Mario, Gahl, William A., Stephens, Philip J., Miller, Vincent A., Ross, Jeffrey S., Ali, Siraj M., Briggs, Samuel R., Fasan, Omotayo, Block, Jared, Héritier, Sebastien, Donadieu, Jean, Solit, David B., Hyman, David M., Baselga, Jose, Janku, Filip, Taylor, Barry S., Park, Christopher Y., Amoura, Zahir, Dogan, Ahmet, Emile, Jean-Francois, Rosen, Neal, Gruber, Tanja A., Abdel-Wahab, Omar
Izdano u Cancer Discov (2015)