Drug susceptibility prediction against a panel of drugs using kernelized Bayesian multitask learning

द्वारा Gönen, Mehmet, Margolin, Adam A.
प्रकाशित 2014

hARACNe: improving the accuracy of regulatory model reverse engineering via higher-order data processing inequality tests

द्वारा Jang, In Sock, Margolin, Adam, Califano, Andrea
प्रकाशित 2013

Simulation Studies as Designed Experiments: The Comparison of Penalized Regression Models in the “Large p, Small n” Setting

द्वारा Chaibub Neto, Elias, Bare, J. Christopher, Margolin, Adam A.
प्रकाशित 2014

STEPWISE GROUP SPARSE REGRESSION (SGSR): GENE-SET-BASED PHARMACOGENOMIC PREDICTIVE MODELS WITH STEPWISE SELECTION OF FUNCTIONAL PRIORS()

द्वारा JANG, IN SOCK, DIENSTMANN, RODRIGO, MARGOLIN, ADAM A., GUINNEY, JUSTIN
में प्रकाशित Pac Symp Biocomput (2015)

The Stream Algorithm: Computationally Efficient Ridge-Regression via Bayesian Model Averaging, and Applications to Pharmacogenomic Prediction of Cancer Cell Line Sensitivity

द्वारा Neto, Elias Chaibub, Jang, In Sock, Friend, Stephen H., Margolin, Adam A.
प्रकाशित 2014

Modeling gene-wise dependencies improves the identification of drug response biomarkers in cancer studies

द्वारा Nikolova, Olga, Moser, Russell, Kemp, Christopher, Gönen, Mehmet, Margolin, Adam A
में प्रकाशित Bioinformatics (2017)

ChIP-on-chip significance analysis reveals ubiquitous transcription factor binding

द्वारा Margolin, Adam A, Palomero, Teresa, Ferrando, Adolfo A, Califano, Andrea, Stolovitzky, Gustavo
में प्रकाशित BMC Bioinformatics (2007)

SHIFT: speedy histopathological-to-immunofluorescent translation of whole slide images using conditional generative adversarial networks

द्वारा Burlingame, Erik A., Margolin, Adam A., Gray, Joe W., Chang, Young Hwan
में प्रकाशित Proc SPIE Int Soc Opt Eng (2018)

Integrative Analysis on Histopathological Image for Identifying Cellular Heterogeneity

द्वारा Chang, Young Hwan, Thibault, Guillaume, Johnson, Brett, Margolin, Adam, Gray, Joe W.
में प्रकाशित Proc SPIE Int Soc Opt Eng (2017)

SYSTEMATIC ASSESSMENT OF ANALYTICAL METHODS FOR DRUG SENSITIVITY PREDICTION FROM CANCER CELL LINE DATA

द्वारा Jang, In Sock, Neto, Elias Chaibub, Guinney, Justin, Friend, Stephen H., Margolin, Adam A.
प्रकाशित 2014

Toward better benchmarking: challenge-based methods assessment in cancer genomics

द्वारा Boutros, Paul C, Margolin, Adam A, Stuart, Joshua M, Califano, Andrea, Stolovitzky, Gustavo
में प्रकाशित Genome Biol (2014)

ChIP-on-chip significance analysis reveals large-scale binding and regulation by human transcription factor oncogenes

द्वारा Margolin, Adam A., Palomero, Teresa, Sumazin, Pavel, Califano, Andrea, Ferrando, Adolfo A., Stolovitzky, Gustavo
प्रकाशित 2009

ARACNE: An Algorithm for the Reconstruction of Gene Regulatory Networks in a Mammalian Cellular Context

द्वारा Margolin, Adam A, Nemenman, Ilya, Basso, Katia, Wiggins, Chris, Stolovitzky, Gustavo, Favera, Riccardo Dalla, Califano, Andrea
प्रकाशित 2006

Empirical Bayes Analysis of Quantitative Proteomics Experiments

द्वारा Margolin, Adam A., Ong, Shao-En, Schenone, Monica, Gould, Robert, Schreiber, Stuart L., Carr, Steven A., Golub, Todd R.
प्रकाशित 2009

Population-level distribution and putative immunogenicity of cancer neoepitopes

द्वारा Wood, Mary A., Paralkar, Mayur, Paralkar, Mihir P., Nguyen, Austin, Struck, Adam J., Ellrott, Kyle, Margolin, Adam, Nellore, Abhinav, Thompson, Reid F.
में प्रकाशित BMC Cancer (2018)

BREAST CANCER HISTOPATHOLOGY IMAGE ANALYSIS PIPELINE FOR TUMOR PURITY ESTIMATION

द्वारा Azimi, Vahid, Chang, Young Hwan, Thibault, Guillaume, Smith, Jaclyn, Tsujikawa, Takahiro, Kukull, Benjamin, Jensen, Bradden, Corless, Christopher, Margolin, Adam, Gray, Joe W.
में प्रकाशित Proc IEEE Int Symp Biomed Imaging (2017)

Chemical Genomics Identifies Small-Molecule MCL1 Repressors and BCL-xL as a Predictor of MCL1 Dependency

द्वारा Wei, Guo, Margolin, Adam A., Haery, Leila, Brown, Emily, Cucolo, Lisa, Julian, Bina, Shehata, Shyemaa, Kung, Andrew L., Beroukhim, Rameen, Golub, Todd R.
प्रकाशित 2012

Enabling transparent and collaborative computational analysis of 12 tumor types within The Cancer Genome Atlas

द्वारा Omberg, Larsson, Ellrott, Kyle, Yuan, Yuan, Kandoth, Cyriac, Wong, Chris, Kellen, Michael R, Friend, Stephen H, Stuart, Josh, Liang, Han, Margolin, Adam A
प्रकाशित 2013

1-Mb Resolution Array-Based Comparative Genomic Hybridization Using a BAC Clone Set Optimized for Cancer Gene Analysis

द्वारा Greshock, Joel, Naylor, Tara L., Margolin, Adam, Diskin, Sharon, Cleaver, Stephen H., Futreal, P. Andrew, deJong, Pieter J., Zhao, Shaying, Liebman, Michael, Weber, Barbara L.
प्रकाशित 2004

Integrated biochemical and computational approach identifies BCL6 direct target genes controlling multiple pathways in normal germinal center B cells

द्वारा Basso, Katia, Saito, Masumichi, Sumazin, Pavel, Margolin, Adam A., Wang, Kai, Lim, Wei-Keat, Kitagawa, Yukiko, Schneider, Christof, Alvarez, Mariano J., Califano, Andrea, Dalla-Favera, Riccardo
प्रकाशित 2010