Designing orthogonal signaling pathways: How to fit in with the surroundings

di Karanicolas, John
Pubblicazione 2012

Computational Design of Affinity and Specificity at Protein-Protein Interfaces

di Karanicolas, John, Kuhlman, Brian
Pubblicazione 2009

“Solvent hydrogen-bond occlusion”: a new model of polar desolvation for biomolecular energetics

di Bazzoli, Andrea, Karanicolas, John
Pubblicato in J Comput Chem (2017)

When does chemical elaboration induce a ligand to change its binding mode?

di Malhotra, Shipra, Karanicolas, John
Pubblicato in J Med Chem (2016)

The structural basis for biphasic kinetics in the folding of the WW domain from a formin-binding protein: Lessons for protein design?

di Karanicolas, John, Brooks, Charles L.
Pubblicazione 2003

Integrating folding kinetics and protein function: Biphasic kinetics and dual binding specificity in a WW domain

di Karanicolas, John, Brooks, Charles L.
Pubblicazione 2004

The origins of asymmetry in the folding transition states of protein L and protein G

di Karanicolas, John, Brooks, Charles L.
Pubblicazione 2002

Druggable Protein Interaction Sites Are More Predisposed to Surface Pocket Formation than the Rest of the Protein Surface

di Johnson, David K., Karanicolas, John
Pubblicazione 2013

Selectivity by Small-Molecule Inhibitors of Protein Interactions Can Be Driven by Protein Surface Fluctuations

di Johnson, David K., Karanicolas, John
Pubblicato in PLoS Comput Biol (2015)

Ultra-High-Throughput Structure-Based Virtual Screening for Small-Molecule Inhibitors of Protein-Protein Interactions

di Johnson, David K., Karanicolas, John
Pubblicato in J Chem Inf Model (2016)

Atomic accuracy in predicting and designing non-canonical RNA structure

di Das, Rhiju, Karanicolas, John, Baker, David
Pubblicazione 2010

DARC 2.0: Improved Docking and Virtual Screening at Protein Interaction Sites

di Gowthaman, Ragul, Lyskov, Sergey, Karanicolas, John
Pubblicato in PLoS One (2015)

Optimal Allosteric Stabilization Sites Using Contact Stabilization Analysis

di Dickson, Alex, Bailey, Christopher T., Karanicolas, John
Pubblicato in J Comput Chem (2016)

Fast Docking on Graphics Processing Units via Ray-Casting

di Khar, Karen R., Goldschmidt, Lukasz, Karanicolas, John
Pubblicazione 2013

The structural properties of non-traditional drug targets present new challenges for virtual screening

di Gowthaman, Ragul, Deeds, Eric J., Karanicolas, John
Pubblicazione 2013

Enhancements to the Rosetta Energy Function Enable Improved Identification of Small Molecules that Inhibit Protein-Protein Interactions

di Bazzoli, Andrea, Kelow, Simon P., Karanicolas, John
Pubblicato in PLoS One (2015)

Isothermal Analysis of ThermoFluor Data can readily provide Quantitative Binding Affinities

di Bai, Nan, Roder, Heinrich, Dickson, Alex, Karanicolas, John
Pubblicato in Sci Rep (2019)

Computational Design of an Allosteric Antibody Switch by Deletion and Rescue of a Complex Structural Constellation

di Khowsathit, Jittasak, Bazzoli, Andrea, Cheng, Hong, Karanicolas, John
Pubblicato in ACS Cent Sci (2020)

Machine learning classification can reduce false positives in structure-based virtual screening

di Adeshina, Yusuf O., Deeds, Eric J., Karanicolas, John
Pubblicato in Proc Natl Acad Sci U S A (2020)

Musashi RNA-binding proteins as cancer drivers and novel therapeutic targets

di Kudinov, Alexander E., Karanicolas, John, Golemis, Erica A., Boumber, Yanis
Pubblicato in Clin Cancer Res (2017)