Decoding a Signature-Based Model of Transcription Cofactor Recruitment Dictated by Cardinal Cis-Regulatory Elements in Proximal Promoter Regions

gan Benner, Christopher, Konovalov, Sergiy, Mackintosh, Carlos, Hutt, Kasey R., Stunnenberg, Rieka, Garcia-Bassets, Ivan
Cyhoeddwyd 2013

Nxf1 Natural Variant E610G Is a Semi-dominant Suppressor of IAP-Induced RNA Processing Defects

gan Concepcion, Dorothy, Ross, Kevin D., Hutt, Kasey R., Yeo, Gene W., Hamilton, Bruce A.
Cyhoeddwyd yn PLoS Genet (2015)

Misregulated RNA processing in amyotrophic lateral sclerosis

gan Polymenidou, Magdalini, Lagier-Tourenne, Clotilde, Hutt, Kasey R., Bennett, C. Frank, Cleveland, Don W., Yeo, Gene W.
Cyhoeddwyd 2012

Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans

gan Zisoulis, Dimitrios G, Lovci, Michael T, Wilbert, Melissa L, Hutt, Kasey R, Liang, Tiffany Y, Pasquinelli, Amy E, Yeo, Gene W
Cyhoeddwyd 2010

Immunoglobulin gene rearrangement in Koreans with multiple myeloma: Clonality assessment and repertoire analysis using next-generation sequencing

gan Kim, Miyoung, Jeon, Kibum, Hutt, Kasey, Zlotnicki, Alyssa M., Kim, Hyo Jung, Lee, Jiwon, Kim, Han-Sung, Kang, Hee Jung, Lee, Young Kyung
Cyhoeddwyd yn PLoS One (2021)

Nuclear Receptor-Induced Chromosomal Proximity and DNA Breaks Underlie Specific Translocations in Cancer

gan Lin, Chunru, Yang, Liuqing, Tanasa, Bogdan, Hutt, Kasey, Ju, Bong-gun, Ohgi, Kenny, Zhang, Jie, Rose, Dave, Fu, Xiang-Dong, Glass, Christopher K., Rosenfeld, Michael G.
Cyhoeddwyd 2009

Enhancing nuclear receptor-induced transcription requires nuclear motor and LSD1-dependent gene networking in interchromatin granules

gan Hu, Qidong, Kwon, Young-Soo, Nunez, Esperanza, Cardamone, Maria Dafne, Hutt, Kasey R., Ohgi, Kenneth A., Garcia-Bassets, Ivan, Rose, David W., Glass, Christopher K., Rosenfeld, Michael G., Fu, Xiang-Dong
Cyhoeddwyd 2008

Sensitive ChIP-DSL technology reveals an extensive estrogen receptor α-binding program on human gene promoters

gan Kwon, Young-Soo, Garcia-Bassets, Ivan, Hutt, Kasey R., Cheng, Christine S., Jin, Mingjie, Liu, Dongyan, Benner, Chris, Wang, Dong, Ye, Zhen, Bibikova, Marina, Fan, Jian-Bing, Duan, Lingxun, Glass, Christopher K., Rosenfeld, Michael G., Fu, Xiang-Dong
Cyhoeddwyd 2007

Histone Methylation-Dependent Mechanisms Impose Ligand Dependency for Gene Activation by Nuclear Receptors

gan Garcia-Bassets, Ivan, Kwon, Young-Soo, Telese, Francesca, Prefontaine, Gratien G., Hutt, Kasey R., Cheng, Christine S., Ju, Bong-Gun, Ohgi, Kenneth A., Wang, Jianxun, Escoubet-Lozach, Laure, Rose, David W., Glass, Christopher K., Fu, Xiang-Dong, Rosenfeld, Michael G.
Cyhoeddwyd 2007

Long pre-mRNA depletion and RNA missplicing contribute to neuronal vulnerability from loss of TDP-43

gan Polymenidou, Magdalini, Lagier-Tourenne, Clotilde, Hutt, Kasey R., Huelga, Stephanie C., Moran, Jacqueline, Liang, Tiffany Y., Ling, Shuo-Chien, Sun, Eveline, Wancewicz, Edward, Mazur, Curt, Kordasiewicz, Holly, Sedaghat, Yalda, Donohue, John Paul, Shiue, Lily, Bennett, C. Frank, Yeo, Gene W., Cleveland, Don W.
Cyhoeddwyd 2011

LIN28 binds messenger RNAs at GGAGA motifs and regulates splicing factor abundance

gan Wilbert, Melissa L., Huelga, Stephanie C., Kapeli, Katannya, Stark, Thomas J., Liang, Tiffany Y., Chen, Stella X., Yan, Bernice Y., Nathanson, Jason L., Hutt, Kasey R., Lovci, Michael T., Kazan, Hilal, Vu, Anthony Q, Massirer, Katlin B., Morris, Quaid, Hoon, Shawn, Yeo, Gene W.
Cyhoeddwyd 2012

Transcriptome–pathology correlation identifies interplay between TDP-43 and the expression of its kinase CK1E in sporadic ALS

gan Krach, Florian, Batra, Ranjan, Wheeler, Emily C., Vu, Anthony Q., Wang, Ruth, Hutt, Kasey, Rabin, Stuart J., Baughn, Michael W., Libby, Ryan T., Diaz-Garcia, Sandra, Stauffer, Jennifer, Pirie, Elaine, Saberi, Shahram, Rodriguez, Maria, Madrigal, Assael A., Kohl, Zacharias, Winner, Beate, Yeo, Gene W., Ravits, John
Cyhoeddwyd yn Acta Neuropathol (2018)

Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs

gan Lagier-Tourenne, Clotilde, Polymenidou, Magdalini, Hutt, Kasey R, Vu, Anthony Q, Baughn, Michael, Huelga, Stephanie C, Clutario, Kevin M, Ling, Shuo-Chien, Liang, Tiffany Y, Mazur, Curt, Wancewicz, Edward, Kim, Aneeza S, Watt, Andy, Freier, Sue, Hicks, Geoffrey G, Donohue, John Paul, Shiue, Lily, Bennett, C Frank, Ravits, John, Cleveland, Don W, Yeo, Gene W
Cyhoeddwyd 2012

Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses

gan Kapeli, Katannya, Pratt, Gabriel A., Vu, Anthony Q., Hutt, Kasey R., Martinez, Fernando J., Sundararaman, Balaji, Batra, Ranjan, Freese, Peter, Lambert, Nicole J., Huelga, Stephanie C., Chun, Seung J., Liang, Tiffany Y., Chang, Jeremy, Donohue, John P., Shiue, Lily, Zhang, Jiayu, Zhu, Haining, Cambi, Franca, Kasarskis, Edward, Hoon, Shawn, Ares Jr., Manuel, Burge, Christopher B., Ravits, John, Rigo, Frank, Yeo, Gene W.
Cyhoeddwyd yn Nat Commun (2016)

Routine Evaluation of Minimal Residual Disease in Myeloma Using Next-Generation Sequencing Clonality Testing: Feasibility, Challenges, and Direct Comparison with High-Sensitivity F...

gan Ho, Caleb, Syed, Mustafa, Roshal, Mikhail, Petrova-Drus, Kseniya, Moung, Christine, Yao, Jinjuan, Quesada, Andres E., Benhamida, Jamal, Vanderbilt, Chad, Liu, Ying, Zhu, Menglei, Yu, Wayne, Maciag, Lidia, Wang, Meiyi, Ma, Yuanyuan, Gao, Qi, Rustad, Even H., Hultcrantz, Malin, Diamond, Benjamin T., Zheng-Lin, Binbin, Huang, Ying, Hutt, Kasey, Miller, Jeffrey E., Dogan, Ahmet, Nafa, Khedoudja, Landgren, Ola, Arcila, Maria E.
Cyhoeddwyd yn J Mol Diagn (2021)

Stability and uniqueness of clonal immunoglobulin CDR3 sequences for MRD tracking in multiple myeloma

gan Rustad, Even H, Misund, Kristine, Bernard, Elsa, Coward, Eivind, Yellapantula, Venkata D, Hultcrantz, Malin, Ho, Caleb, Kazandjian, Dickran, Korde, Neha, Mailankody, Sham, Keats, Jonathan J, Akhlaghi, Theresia, Viny, Aaron D, Mayman, David J, Carroll, Kaitlin, Patel, Minal, Famulare, Christopher A, Bruinink, Davine Hofste op, Hutt, Kasey, Jacobsen, Austin, Huang, Ying, Miller, Jeffrey E, Maura, Francesco, Papaemmanuil, Elli, Waage, Anders, Arcila, Maria E, Landgren, Ola
Cyhoeddwyd yn Am J Hematol (2019)

Targeted degradation of sense and antisense C9orf72 RNA foci as therapy for ALS and frontotemporal degeneration

gan Lagier-Tourenne, Clotilde, Baughn, Michael, Rigo, Frank, Sun, Shuying, Liu, Patrick, Li, Hai-Ri, Jiang, Jie, Watt, Andrew T., Chun, Seung, Katz, Melanie, Qiu, Jinsong, Sun, Ying, Ling, Shuo-Chien, Zhu, Qiang, Polymenidou, Magdalini, Drenner, Kevin, Artates, Jonathan W., McAlonis-Downes, Melissa, Markmiller, Sebastian, Hutt, Kasey R., Pizzo, Donald P., Cady, Janet, Harms, Matthew B., Baloh, Robert H., Vandenberg, Scott R., Yeo, Gene W., Fu, Xiang-Dong, Bennett, C. Frank, Cleveland, Don W., Ravits, John
Cyhoeddwyd 2013