Evidence That Gene Activation and Silencing during Stem Cell Differentiation Requires a Transcriptionally Paused Intermediate State

Por Golob, Jonathan L., Kumar, Roshan M., Guenther, Matthew G., Pabon, Lil M., Pratt, Gabriel A., Loring, Jeanne F., Laurent, Louise C., Young, Richard A., Murry, Charles E.
Publicado em 2011

SONAR discovers RNA binding proteins from analysis of large-scale protein-protein interactomes

Por Brannan, Kristopher W., Jin, Wenhao, Huelga, Stephanie C., Banks, Charles A. S., Gilmore, Joshua M., Florens, Laurence, Washburn, Michael P., Van Nostrand, Eric L., Pratt, Gabriel A., Schwinn, Marie K., Daniels, Danette L., Yeo, Gene W.
Publicado no Mol Cell (2016)

Robust transcriptome-wide discovery of RNA binding protein binding sites with enhanced CLIP (eCLIP)

Por Van Nostrand, Eric L., Pratt, Gabriel A., Shishkin, Alexander A., Gelboin-Burkhart, Chelsea, Fang, Mark Y., Sundararaman, Balaji, Blue, Steven M., Nguyen, Thai B., Surka, Christine, Elkins, Keri, Stanton, Rebecca, Rigo, Frank, Guttman, Mitchell, Yeo, Gene W.
Publicado no Nat Methods (2016)

Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges

Por Lovci, Michael T, Ghanem, Dana, Marr, Henry, Arnold, Justin, Gee, Sherry, Parra, Marilyn, Liang, Tiffany Y, Stark, Thomas J, Gehman, Lauren T, Hoon, Shawn, Massirer, Katlin B, Pratt, Gabriel A, Black, Douglas L, Gray, Joe W, Conboy, John G, Yeo, Gene W
Publicado em 2013

Enhanced CLIP uncovers IMP protein-RNA targets in human pluripotent stem cells important for cell adhesion and survival

Por Conway, Anne E., Van Nostrand, Eric L., Pratt, Gabriel A., Aigner, Stefan, Wilbert, Melissa L., Sundararaman, Balaji, Freese, Peter, Lambert, Nicole J., Sathe, Shashank, Liang, Tiffany Y., Essex, Anthony, Landais, Severine, Burge, Christopher B., Jones, D. Leanne, Yeo, Gene W.
Publicado no Cell Rep (2016)

Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses

Por Kapeli, Katannya, Pratt, Gabriel A., Vu, Anthony Q., Hutt, Kasey R., Martinez, Fernando J., Sundararaman, Balaji, Batra, Ranjan, Freese, Peter, Lambert, Nicole J., Huelga, Stephanie C., Chun, Seung J., Liang, Tiffany Y., Chang, Jeremy, Donohue, John P., Shiue, Lily, Zhang, Jiayu, Zhu, Haining, Cambi, Franca, Kasarskis, Edward, Hoon, Shawn, Ares Jr., Manuel, Burge, Christopher B., Ravits, John, Rigo, Frank, Yeo, Gene W.
Publicado no Nat Commun (2016)

Protein-RNA networks regulated by normal and ALS-associated mutant HNRNPA2B1 in the nervous system

Por Martinez, Fernando J., Pratt, Gabriel A., Van Nostrand, Eric L., Batra, Ranjan, Huelga, Stephanie C., Kapeli, Katannya, Freese, Peter, Chun, Seung J., Ling, Karen, Gelboin-Burkhart, Chelsea, Fijany, Layla, Wang, Harrison, Nussbacher, Julia K., Broski, Sara M., Kim, Hong Joo, Lardelli, Rea, Sundararaman, Balaji, Donohue, John P., Javaherian, Ashkan, Lykke-Andersen, Jens, Finkbeiner, Steven, Bennett, Frank, Ares, Manuel, Burge, Christopher B., Taylor, J. Paul, Rigo, Frank, Yeo, Gene W.
Publicado no Neuron (2016)