A genome-wide view of mutation rate co-variation using multivariate analyses

por Ananda, Guruprasad, Chiaromonte, Francesca, Makova, Kateryna D
Publicado 2011

Whole-Genome Sequence of the C57L/J Mouse Inbred Strain

por Ananda, Guruprasad, Takemon, Yuka, Hinerfeld, Douglas, Korstanje, Ron
Publicado 2014

Segmenting the human genome based on states of neutral genetic divergence

por Kuruppumullage Don, Prabhani, Ananda, Guruprasad, Chiaromonte, Francesca, Makova, Kateryna D.
Publicado 2013

Windshield splatter analysis with the Galaxy metagenomic pipeline

por Kosakovsky Pond, Sergei, Wadhawan, Samir, Chiaromonte, Francesca, Ananda, Guruprasad, Chung, Wen-Yu, Taylor, James, Nekrutenko, Anton
Publicado 2009

Distinct Mutational Behaviors Differentiate Short Tandem Repeats from Microsatellites in the Human Genome

por Ananda, Guruprasad, Walsh, Erin, Jacob, Kimberly D., Krasilnikova, Maria, Eckert, Kristin A., Chiaromonte, Francesca, Makova, Kateryna D.
Publicado 2013

Microsatellite Interruptions Stabilize Primate Genomes and Exist as Population-Specific Single Nucleotide Polymorphisms within Individual Human Genomes

por Ananda, Guruprasad, Hile, Suzanne E., Breski, Amanda, Wang, Yanli, Kelkar, Yogeshwar, Makova, Kateryna D., Eckert, Kristin A.
Publicado 2014

Galaxy, a web-based genome analysis tool for experimentalists

por Blankenberg, Daniel, Von Kuster, Gregory, Coraor, Nathaniel, Ananda, Guruprasad, Lazarus, Ross, Mangan, Mary, Nekrutenko, Anton, Taylor, James
Publicado en Curr Protoc Mol Biol (2010)

HELLS and PRDM9 form a pioneer complex to open chromatin at meiotic recombination hot spots

por Spruce, Catrina, Dlamini, Sibongakonke, Ananda, Guruprasad, Bronkema, Naomi, Tian, Hui, Paigen, Kenneth, Carter, Gregory W., Baker, Christopher L.
Publicado en Genes Dev (2020)

Molecular Genetic Analysis of Ovarian Brenner Tumors and Associated Mucinous Epithelial Neoplasms: High Variant Concordance and Identification of Mutually Exclusive RAS Driver Muta...

por Tafe, Laura J., Muller, Kristen E., Ananda, Guruprasad, Mitchell, Talia, Spotlow, Vanessa, Patterson, Sara E., Tsongalis, Gregory J., Mockus, Susan M.
Publicado en Am J Pathol (2016)

Discovery of a new predominant cytosine DNA modification that is linked to gene expression in malaria parasites

por Hammam, Elie, Ananda, Guruprasad, Sinha, Ameya, Scheidig-Benatar, Christine, Bohec, Mylene, Preiser, Peter R, Dedon, Peter C, Scherf, Artur, Vembar, Shruthi S
Publicado en Nucleic Acids Res (2020)

Accurate typing of short tandem repeats from genome-wide sequencing data and its applications

por Fungtammasan, Arkarachai, Ananda, Guruprasad, Hile, Suzanne E., Su, Marcia Shu-Wei, Sun, Chen, Harris, Robert, Medvedev, Paul, Eckert, Kristin, Makova, Kateryna D.
Publicado en Genome Res (2015)

Technical and Regulatory Considerations for Taking Liquid Biopsy to the Clinic: Validation of the JAX PlasmaMonitor(TM) Assay

por Sisson, Bridgette A, Uvalic, Jasmina, Kelly, Kevin, Selvam, Pavalan, Hesse, Andrew N, Ananda, Guruprasad, Chandok, Harshpreet, Bergeron, Daniel, Holinka, Lauren, Reddi, Honey V
Publicado en Biomark Insights (2019)

Transcriptomic stratification of late-onset Alzheimer's cases reveals novel genetic modifiers of disease pathology

por Milind, Nikhil, Preuss, Christoph, Haber, Annat, Ananda, Guruprasad, Mukherjee, Shubhabrata, John, Cai, Shapley, Sarah, Logsdon, Benjamin A., Crane, Paul K., Carter, Gregory W.
Publicado en PLoS Genet (2020)

Mature Microsatellites: Mechanisms Underlying Dinucleotide Microsatellite Mutational Biases in Human Cells

por Baptiste, Beverly A., Ananda, Guruprasad, Strubczewski, Noelle, Lutzkanin, Andrew, Khoo, Su Jen, Srikanth, Abhinaya, Kim, Nari, Makova, Kateryna D., Krasilnikova, Maria M., Eckert, Kristin A.
Publicado 2013

Tissue-Specific Trans Regulation of the Mouse Epigenome

por Baker, Christopher L., Walker, Michael, Arat, Seda, Ananda, Guruprasad, Petkova, Pavlina, Powers, Natalie R., Tian, Hui, Spruce, Catrina, Ji, Bo, Rausch, Dylan, Choi, Kwangbom, Petkov, Petko M., Carter, Gregory W., Paigen, Kenneth
Publicado en Genetics (2019)

Astrocyte Support for Oligodendrocyte Differentiation can be Conveyed via Extracellular Vesicles but Diminishes with Age

por Willis, Cory M., Nicaise, Alexandra M., Bongarzone, Ernesto R., Givogri, Maria, Reiter, Cory R., Heintz, Olivia, Jellison, Evan R., Sutter, Pearl A., TeHennepe, Gregg, Ananda, Guruprasad, Vella, Anthony T., Crocker, Stephen J.
Publicado en Sci Rep (2020)

Development and validation of the JAX Cancer Treatment Profile™ for detection of clinically actionable mutations in solid tumors

por Ananda, Guruprasad, Mockus, Susan, Lundquist, Micaela, Spotlow, Vanessa, Simons, Al, Mitchell, Talia, Stafford, Grace, Philip, Vivek, Stearns, Timothy, Srivastava, Anuj, Barter, Mary, Rowe, Lucy, Malcolm, Joan, Bult, Carol, Karuturi, Radha Krishna Murthy, Rasmussen, Karen, Hinerfeld, Douglas
Publicado en Exp Mol Pathol (2015)

A Bayesian Framework for Generalized Linear Mixed Modeling Identifies New Candidate Loci for Late-Onset Alzheimer’s Disease

por Wang, Xulong, Philip, Vivek M., Ananda, Guruprasad, White, Charles C., Malhotra, Ankit, Michalski, Paul J., Karuturi, Krishna R. Murthy, Chintalapudi, Sumana R., Acklin, Casey, Sasner, Michael, Bennett, David A., De Jager, Philip L., Howell, Gareth R., Carter, Gregory W.
Publicado en Genetics (2018)

Genomic data analysis workflows for tumors from patient-derived xenografts (PDXs): challenges and guidelines

por Woo, Xing Yi, Srivastava, Anuj, Graber, Joel H., Yadav, Vinod, Sarsani, Vishal Kumar, Simons, Al, Beane, Glen, Grubb, Stephen, Ananda, Guruprasad, Liu, Rangjiao, Stafford, Grace, Chuang, Jeffrey H., Airhart, Susan D., Karuturi, R. Krishna Murthy, George, Joshy, Bult, Carol J.
Publicado en BMC Med Genomics (2019)

High-resolution deconstruction of evolution induced by chemotherapy treatments in breast cancer xenografts

por Kim, Hyunsoo, Kumar, Pooja, Menghi, Francesca, Noorbakhsh, Javad, Cerveira, Eliza, Ryan, Mallory, Zhu, Qihui, Ananda, Guruprasad, George, Joshy, Chen, Henry C., Mockus, Susan, Zhang, Chengsheng, Yang, Yan, Keck, James, Karuturi, R. Krishna Murthy, Bult, Carol J., Lee, Charles, Liu, Edison T., Chuang, Jeffrey H.
Publicado en Sci Rep (2018)