Infrastructure for genomic interactions: Bioconductor classes for Hi-C, ChIA-PET and related experiments

Por Lun, Aaron T. L., Perry, Malcolm, Ing-Simmons, Elizabeth
Publicado no F1000Res (2016)

GenomicInteractions: An R/Bioconductor package for manipulating and investigating chromatin interaction data

Por Harmston, Nathan, Ing-Simmons, Elizabeth, Perry, Malcolm, Barešić, Anja, Lenhard, Boris
Publicado no BMC Genomics (2015)

Assessing coverage of essential maternal and child health interventions using health-facility data in Uganda

Por Simmons, Elizabeth M., Singh, Kavita, Mpiima, Jamiru, Kumar, Manish, Weiss, William
Publicado no Popul Health Metr (2020)

Seasonal trends and maternal characteristics as predictors of maternal undernutrition and low birthweight in Eastern Maharashtra, India

Por Locks, Lindsey M., Patel, Archana, Katz, Elizabeth, Simmons, Elizabeth, Hibberd, Patricia
Publicado no Matern Child Nutr (2020)

Natural History of Comorbid Orofacial Pain Among Women with Vestibulodynia

Por Bair, Eric, Simmons, Elizabeth, Hartung, Jessica, Desia, Kinnari, Maixner, William, Zolnoun, Denniz
Publicado no Clin J Pain (2015)

Topologically associating domains are ancient features that coincide with Metazoan clusters of extreme noncoding conservation

Por Harmston, Nathan, Ing-Simmons, Elizabeth, Tan, Ge, Perry, Malcolm, Merkenschlager, Matthias, Lenhard, Boris
Publicado no Nat Commun (2017)

Management of infants born to women infected with hepatitis B in the military healthcare system

Por Sainato, Rebecca J, Simmons, Elizabeth G, Muench, Dawn F, Burnett, Mark W, Braun, LoRanée
Publicado em 2013

Independence of chromatin conformation and gene regulation during Drosophila dorsoventral patterning

Por Ing-Simmons, Elizabeth, Vaid, Roshan, Bing, Xin Yang, Levine, Michael, Mannervik, Mattias, Vaquerizas, Juan M.
Publicado no Nat Genet (2021)

Familial Polycythemia Caused by a Novel Mutation in the Beta Globin Gene: Essential Role of P50 in Evaluation of Familial Polycythemia

Por Agarwal, Neeraj, Mojica-Henshaw, Mariluz P., Simmons, Elizabeth. D., Hussey, Dottie, Ou, Ching N., Prchal, Josef T.
Publicado em 2007

Duration of solid fuel cookstove use is associated with increased risk of acute lower respiratory infection among children under six months in rural central India

Por Arlington, Lauren, Patel, Archana B., Simmons, Elizabeth, Kurhe, Kunal, Prakash, Amber, Rao, Sowmya R., Hibberd, Patricia L.
Publicado no PLoS One (2019)

Trends and determinants of increasing caesarean sections from 2010 to 2013 in a prospective population-based registry in eastern rural Maharashtra, India

Por Patel, Archana, Pusdekar, Yamini Vinod, Prakash, Amber Abhijeet, Simmons, Elizabeth, Waikar, Manjushree, Rao, Sowmya R, Hibberd, Patricia L
Publicado no BMJ Open (2019)

The relationship between autism symptoms and arousal level in toddlers with autism spectrum disorder, as measured by electrodermal activity

Por Prince, Emily Barbara, Kim, Elizabeth S, Wall, Carla Anne, Gisin, Eugenia, Goodwin, Matthew S, Simmons, Elizabeth Schoen, Chawarska, Kaisa, Shic, Frederick
Publicado no Autism (2016)

Spatial enhancer clustering and regulation of enhancer-proximal genes by cohesin

Por Ing-Simmons, Elizabeth, Seitan, Vlad C., Faure, Andre J., Flicek, Paul, Carroll, Thomas, Dekker, Job, Fisher, Amanda G., Lenhard, Boris, Merkenschlager, Matthias
Publicado no Genome Res (2015)

Kernel Machine SNP-set Testing under Multiple Candidate Kernels

Por Wu, Michael C., Maity, Arnab, Lee, Seunggeun, Simmons, Elizabeth M., Harmon, Quaker E., Lin, Xinyi, Engel, Stephanie M., Molldrem, Jeffrey J., Armistead, Paul M.
Publicado em 2013

Constraints and consequences of the emergence of amino acid repeats in eukaryotic proteins

Por Chavali, Sreenivas, Chavali, Pavithra L., Chalancon, Guilhem, Sanchez de Groot, Natalia, Gemayel, Rita, Latysheva, Natasha S., Ing-Simmons, Elizabeth, Verstrepen, Kevin J., Balaji, Santhanam, Babu, M. Madan
Publicado no Nat Struct Mol Biol (2017)

Cohesin-based chromatin interactions enable regulated gene expression within preexisting architectural compartments

Por Seitan, Vlad C., Faure, Andre J., Zhan, Ye, McCord, Rachel Patton, Lajoie, Bryan R., Ing-Simmons, Elizabeth, Lenhard, Boris, Giorgetti, Luca, Heard, Edith, Fisher, Amanda G., Flicek, Paul, Dekker, Job, Merkenschlager, Matthias
Publicado em 2013

Control of inducible gene expression links cohesin to hematopoietic progenitor self-renewal and differentiation

Por Cuartero, Sergi, Weiss, Felix D., Dharmalingam, Gopuraja, Guo, Ya, Ing-Simmons, Elizabeth, Masella, Silvia, Robles-Rebollo, Irene, Xiao, Xiaolin, Wang, Yi-Fang, Barozzi, Iros, Djeghloul, Dounia, Amano, Mariane T., Niskanen, Henri, Petretto, Enrico, Dowell, Robin D., Tachibana, Kikuë, Kaikkonen, Minna U., Nasmyth, Kim A., Lenhard, Boris, Natoli, Gioacchino, Fisher, Amanda G., Merkenschlager, Matthias
Publicado no Nat Immunol (2018)

Feedforward regulation of Myc coordinates lineage-specific with housekeeping gene expression during B cell progenitor cell differentiation

Por Ferreirós-Vidal, Isabel, Carroll, Thomas, Zhang, Tianyi, Lagani, Vincenzo, Ramirez, Ricardo N., Ing-Simmons, Elizabeth, Gómez-Valadés, Alicia G., Cooper, Lee, Liang, Ziwei, Papoutsoglou, Georgios, Dharmalingam, Gopuraja, Guo, Ya, Tarazona, Sonia, Fernandes, Sunjay J., Noori, Peri, Silberberg, Gilad, Fisher, Amanda G., Tsamardinos, Ioannis, Mortazavi, Ali, Lenhard, Boris, Conesa, Ana, Tegner, Jesper, Merkenschlager, Matthias, Gomez-Cabrero, David
Publicado no PLoS Biol (2019)

Evaluating the effect of care around labor and delivery practices on early neonatal mortality in the Global Network’s Maternal and Newborn Health Registry

Por Patel, Archana B., Simmons, Elizabeth M., Rao, Sowmya R., Moore, Janet, Nolen, Tracy L., Goldenberg, Robert L., Goudar, Shivaprasad S., Somannavar, Manjunath S., Esamai, Fabian, Nyongesa, Paul, Garces, Ana L., Chomba, Elwyn, Mwenechanya, Musaku, Saleem, Sarah, Naqvi, Farnaz, Bauserman, Melissa, Bucher, Sherri, Krebs, Nancy F., Derman, Richard J., Carlo, Waldemar A., Koso-ThomasMcClure, Marion Elizabeth M., Hibberd, Patricia L.
Publicado no Reprod Health (2020)