The origin of recurrent translocations in recombining lymphocytes: a balance between break frequency and nuclear proximity

od Rocha, Pedro P., Skok, Jane A.
Wydane 2013

Finding the Right Partner in a 3D Genome

od Rocha, Pedro P., Chaumeil, Julie, Skok, Jane A.
Wydane 2013

Response to Casellas et al

od Rocha, Pedro P., Micsinai, Mariann, Kluger, Yuval, Skok, Jane A.
Wydane 2013

Interpreting 4C-Seq data: how far can we go?

od Raviram, Ramya, Rocha, Pedro P., Bonneau, Richard, Skok, Jane A.
Wydane w Epigenomics (2014)

Breaking TADs: insights into hierarchical genome organization

od Rocha, Pedro P., Raviram, Ramya, Bonneau, Richard, Skok, Jane A.
Wydane w Epigenomics (2015)

Correction: Lack of functional and expression homology between human and mouse aldo-keto reductase 1C enzymes: implications for modelling human cancers

od Schrewe Heinrich, Rocha Pedro P, Davies Nicholas J, Veliça Pedro, Ride Jonathan P, Bunce Chris M
Wydane 2010-01-01

Lack of functional and expression homology between human and mouse aldo-keto reductase 1C enzymes: implications for modelling human cancers

od Veliça, Pedro, Davies, Nicholas J, Rocha, Pedro P, Schrewe, Heinrich, Ride, Jonathan P, Bunce, Chris M
Wydane 2009

Correction: Lack of functional and expression homology between human and mouse aldo-keto reductase 1C enzymes: implications for modelling human cancers

od Veliça, Pedro, Davies, Nicholas J, Rocha, Pedro P, Schrewe, Heinrich, Ride, Jonathan P, Bunce, Chris M
Wydane 2010

CTCF establishes discrete functional chromatin domains at the Hox clusters during differentiation

od Narendra, Varun, Rocha, Pedro P., An, Disi, Raviram, Ramya, Skok, Jane A., Mazzoni, Esteban O., Reinberg, Danny
Wydane w Science (2015)

CRISPR-dCas9 and sgRNA scaffolds enable dual-colour live imaging of satellite sequences and repeat-enriched individual loci

od Fu, Yi, Rocha, Pedro P., Luo, Vincent M., Raviram, Ramya, Deng, Yan, Mazzoni, Esteban O., Skok, Jane A.
Wydane w Nat Commun (2016)

Identification of multi-loci hubs from 4C-seq demonstrates the functional importance of simultaneous interactions

od Jiang, Tingting, Raviram, Ramya, Snetkova, Valentina, Rocha, Pedro P., Proudhon, Charlotte, Badri, Sana, Bonneau, Richard, Skok, Jane A., Kluger, Yuval
Wydane w Nucleic Acids Res (2016)

Analysis of 3D genomic interactions identifies candidate host genes that transposable elements potentially regulate

od Raviram, Ramya, Rocha, Pedro P., Luo, Vincent M., Swanzey, Emily, Miraldi, Emily R., Chuong, Edward B., Feschotte, Cédric, Bonneau, Richard, Skok, Jane A.
Wydane w Genome Biol (2018)

Close proximity to Igh is a contributing factor to AID mediated translocations

od Rocha, Pedro P., Micsinai, Mariann, Kim, JungHyun Rachel, Hewitt, Susannah L., Souza, Patricia P., Trimarchi, Thomas, Strino, Francesco, Parisi, Fabio, Kluger, Yuval, Skok, Jane A.
Wydane 2012

4C-ker: A Method to Reproducibly Identify Genome-Wide Interactions Captured by 4C-Seq Experiments

od Raviram, Ramya, Rocha, Pedro P., Müller, Christian L., Miraldi, Emily R., Badri, Sana, Fu, Yi, Swanzey, Emily, Proudhon, Charlotte, Snetkova, Valentina, Bonneau, Richard, Skok, Jane A.
Wydane w PLoS Comput Biol (2016)

Capturing the Onset of PRC2-Mediated Repressive Domain Formation

od Oksuz, Ozgur, Narendra, Varun, Lee, Chul-Hwan, Descostes, Nicolas, LeRoy, Gary, Raviram, Ramya, Blumenberg, Lili, Karch, Kelly, Rocha, Pedro P., Garcia, Benjamin A., Skok, Jane A., Reinberg, Danny
Wydane w Mol Cell (2018)

Mediator facilitates transcriptional activation and dynamic long-range contacts at the IgH locus during class switch recombination

od Thomas-Claudepierre, Anne-Sophie, Robert, Isabelle, Rocha, Pedro P., Raviram, Ramya, Schiavo, Ebe, Heyer, Vincent, Bonneau, Richard, Luo, Vincent M., Reddy, Janardan K., Borggrefe, Tilman, Skok, Jane A., Reina-San-Martin, Bernardo
Wydane w J Exp Med (2016)

A Damage-Independent Role for 53BP1 that Impacts Break Order and Igh Architecture during Class Switch Recombination

od Rocha, Pedro P., Raviram, Ramya, Fu, Yi, Kim, JungHyun, Luo, Vincent M., Aljoufi, Arafat, Swanzey, Emily, Pasquarella, Alessandra, Balestrini, Alessia, Miraldi, Emily R., Bonneau, Richard, Petrini, John, Schotta, Gunnar, Skok, Jane A.
Wydane w Cell Rep (2016)

Cohesin loss alters adult hematopoietic stem cell homeostasis, leading to myeloproliferative neoplasms

od Mullenders, Jasper, Aranda-Orgilles, Beatriz, Lhoumaud, Priscillia, Keller, Matthew, Pae, Juhee, Wang, Kun, Kayembe, Clarisse, Rocha, Pedro P., Raviram, Ramya, Gong, Yixiao, Premsrirut, Prem K., Tsirigos, Aristotelis, Bonneau, Richard, Skok, Jane A., Cimmino, Luisa, Hoehn, Daniela, Aifantis, Iannis
Wydane w J Exp Med (2015)

Wolf-Hirschhorn Syndrome Candidate-1 is necessary for correct hematopoietic and B cell development

od Campos-Sanchez, Elena, Deleyto-Seldas, Nerea, Dominguez, Veronica, Carrillo-de-Santa-Pau, Enrique, Ura, Kiyoe, Rocha, Pedro P., Kim, JungHyun, Aljoufi, Arafat, Esteve-Codina, Anna, Dabad, Marc, Gut, Marta, Heyn, Holger, Kaneda, Yasufumi, Nimura, Keisuke, Skok, Jane A., Martinez-Frias, Maria Luisa, Cobaleda, Cesar
Wydane w Cell Rep (2017)

Gata3-controlled nucleosome eviction drives Myc enhancer activity in T-cell development and leukemia

od Belver, Laura, Yang, Alexander Y., Albero, Robert, Herranz, Daniel, Brundu, Francesco G., Quinn, S. Aidan, Pérez-Durán, Pablo, Álvarez, Silvia, Gianni, Francesca, Rashkovan, Marissa, Gurung, Devya, Rocha, Pedro P., Raviram, Ramya, Reglero, Clara, Cortés, Jose R., Cooke, Anisha J., Wendorff, Agnieszka A., Cordó, Valentina, Meijerink, Jules P., Rabadan, Raúl, Ferrando, Adolfo A.
Wydane w Cancer Discov (2019)