RAG off-target activity is in the loop

Bằng Blumenberg, Lili, Skok, Jane A
Xuất bản năm Trends Mol Med (2015)

Hypercluster: a flexible tool for parallelized unsupervised clustering optimization

Bằng Blumenberg, Lili, Ruggles, Kelly V.
Xuất bản năm BMC Bioinformatics (2020)

Phylogenetic Analysis of Algal Symbionts Associated with Four North American Amphibian Egg Masses

Bằng Kim, Eunsoo, Lin, Yuan, Kerney, Ryan, Blumenberg, Lili, Bishop, Cory
Xuất bản năm PLoS One (2014)

BlackSheep: A Bioconductor and Bioconda Package for Differential Extreme Value Analysis

Bằng Blumenberg, Lili, Kawaler, Emily A., Cornwell, MacIntosh, Smith, Shaleigh, Ruggles, Kelly V., Fenyö, David
Xuất bản năm J Proteome Res (2021)

Impaired Expression of Rearranged Immunoglobulin Genes and Premature p53 Activation Block B Cell Development in BMI1 Null Mice

Bằng Cantor, David J., King, Bryan, Blumenberg, Lili, DiMauro, Teresa, Aifantis, Iannis, Koralov, Sergei B., Skok, Jane A., David, Gregory
Xuất bản năm Cell Rep (2019)

The Conserved ATM Kinase RAG2-S365 Phosphorylation Site Limits Cleavage Events in Individual Cells Independent of Any Repair Defect

Bằng Hewitt, Susannah L., Wong, Jason B., Lee, Ji-Hoon, Nishana, Mayilaadumveettil, Chen, Hongxi, Coussens, Marc, Arnal, Suzzette M., Blumenberg, Lili M., Roth, David B., Paull, Tanya T., Skok, Jane A.
Xuất bản năm Cell Rep (2017)

Capturing the Onset of PRC2-Mediated Repressive Domain Formation

Bằng Oksuz, Ozgur, Narendra, Varun, Lee, Chul-Hwan, Descostes, Nicolas, LeRoy, Gary, Raviram, Ramya, Blumenberg, Lili, Karch, Kelly, Rocha, Pedro P., Garcia, Benjamin A., Skok, Jane A., Reinberg, Danny
Xuất bản năm Mol Cell (2018)

Hyperactive CDK2 Activity in Basal-like Breast Cancer Imposes a Genome Integrity Liability that Can Be Exploited by Targeting DNA Polymerase Epsilon

Bằng Sviderskiy, Vladislav O., Blumenberg, Lili, Gorodetsky, Elizabeth, Karakousi, Triantafyllia R., Hirsh, Nicole, Alvarez, Samantha W., Terzi, Erdem M., Kaparos, Efiyenia, Whiten, Gabrielle C., Ssebyala, Shakirah, Tonzi, Peter, Mir, Hannan, Neel, Benjamin G., Huang, Tony T., Adams, Sylvia, Ruggles, Kelly V., Possemato, Richard
Xuất bản năm Mol Cell (2020)

miRNAs Are Essential for the Regulation of the PI3K/AKT/FOXO Pathway and Receptor Editing during B Cell Maturation

Bằng Coffre, Maryaline, Benhamou, David, Rieß, David, Blumenberg, Lili, Snetkova, Valentina, Hines, Marcus J., Chakraborty, Tirtha, Bajwa, Sofia, Jensen, Kari, Chong, Mark M.W., Getu, Lelise, Silverman, Gregg J., Blelloch, Robert, Littman, Dan R., Calado, Dinis, Melamed, Doron, Skok, Jane A., Rajewsky, Klaus, Koralov, Sergei B.
Xuất bản năm Cell Rep (2016)

Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy

Bằng Krug, Karsten, Jaehnig, Eric J., Satpathy, Shankha, Blumenberg, Lili, Karpova, Alla, Anurag, Meenakshi, Miles, George, Mertins, Philipp, Geffen, Yifat, Tang, Lauren C., Heiman, David I., Cao, Song, Maruvka, Yosef E., Lei, Jonathan T., Huang, Chen, Kothadia, Ramani B., Colaprico, Antonio, Birger, Chet, Wang, Jarey, Dou, Yongchao, Wen, Bo, Shi, Zhiao, Liao, Yuxing, Wiznerowicz, Maciej, Wyczalkowski, Matthew A., Chen, Xi Steven, Kennedy, Jacob J., Paulovich, Amanda G., Thiagarajan, Mathangi, Kinsinger, Christopher R., Hiltke, Tara, Boja, Emily S., Mesri, Mehdi, Robles, Ana I., Rodriguez, Henry, Westbrook, Thomas F., Ding, Li, Getz, Gad, Clauser, Karl R., Fenyö, David, Ruggles, Kelly V., Zhang, Bing, Mani, D.R., Carr, Steven A., Ellis, Matthew J., Gillette, Michael A.
Xuất bản năm Cell (2020)

Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma

Bằng Gillette, Michael A., Satpathy, Shankha, Cao, Song, Dhanasekaran, Saravana M., Vasaikar, Suhas V., Krug, Karsten, Petralia, Francesca, Li, Yize, Liang, Wen-Wei, Reva, Boris, Krek, Azra, Ji, Jiayi, Song, Xiaoyu, Liu, Wenke, Hong, Runyu, Yao, Lijun, Blumenberg, Lili, Savage, Sara R., Wendl, Michael C., Wen, Bo, Li, Kai, Tang, Lauren C., MacMullan, Melanie A., Avanessian, Shayan C., Kane, M. Harry, Newton, Chelsea J., Cornwell, MacIntosh, Kothadia, Ramani B., Ma, Weiping, Yoo, Seungyeul, Mannan, Rahul, Vats, Pankaj, Kumar-Sinha, Chandan, Kawaler, Emily A., Omelchenko, Tatiana, Colaprico, Antonio, Geffen, Yifat, Maruvka, Yosef E., da Veiga Leprevost, Felipe, Wiznerowicz, Maciej, Gümüs, Zeynep H., Veluswamy, Rajwanth R., Hostetter, Galen, Heiman, David I., Wyczalkowski, Matthew A., Hiltke, Tara, Mesri, Mehdi, Kinsinger, Christopher R., Boja, Emily S., Omenn, Gilbert S., Chinnaiyan, Arul M., Rodriguez, Henry, Li, Qing Kay, Jewell, Scott D., Thiagarajan, Mathangi, Getz, Gad, Zhang, Bing, Fenyö, David, Ruggles, Kelly V., Cieslik, Marcin P., Robles, Ana I., Clauser, Karl R., Govindan, Ramaswamy, Wang, Pei, Nesvizhskii, Alexey I., Ding, Li, Mani, D. R., Carr, Steven A.
Xuất bản năm Cell (2020)

Proteogenomic Characterization of Endometrial Carcinoma

Bằng Dou, Yongchao, Kawaler, Emily A., Zhou, Daniel Cui, Gritsenko, Marina A., Huang, Chen, Blumenberg, Lili, Karpova, Alla, Petyuk, Vladislav A., Savage, Sara R., Satpathy, Shankha, LiU, Wenke, WU, Yige, Tsai, Chia-Feng, Wen, Bo, Li, Zhi, Cao, Song, Moon, Jamie, Shi, zhiao, Cornwell, MacIntosh, Wyczalkowski, Matthew A., Chu, Rosalie K., Vasaikar, Suhas, Zhou, Hua, Gao, Qingsong, Moore, Ronald J., Li, Kai, Sethuraman, Sunantha, Monroe, Matthew E., Zhao, Rui, Heiman, David, Krug, Karsten, Clauser, Karl, Kothadia, Ramani, Maruvka, Yosef, Pico, Alexander R., Oliphant, Amanda E., Hoskins, Emily L., Pugh, Samuel L., Beecroft, Sean J.I., Adams, David W., Jarman, Jonathan C., Kong, Andy, Chang, Hui-Yin, Reva, Boris, Liao, Yuxing, Rykunov, Dmitry, Colaprico, Antonio, Chen, Xi Steven, Czekański, Andrzej, Jędryka, Marcin, Matkowski, Rafaᵼ, Wiznerowicz, Maciej, Hiltke, Tara, Boja, Emily, Kinsinger, Christopher R., Mesri, Mehdi, Robles, Ana I., Rodriguez, Henry, Mutch, David, Fuh, Katherine, Ellis, Matthew J., DeLair, Deborah, Thiagarajan, Mathangi, Mani, D.R., Getz, Gad, Noble, Michael, Nesvizhskii, Alexey I., Wang, Pei, Anderson, Matthew L., Levine, Douglas A., Smith, Richard D., Payne, Samuel H., Ruggles, Kelly V., Rodland, Karin D., Ding, Li, Zhang, Bing, Liu, Tao, Fenyö, David
Xuất bản năm Cell (2020)