The origin of recurrent translocations in recombining lymphocytes: a balance between break frequency and nuclear proximity

af Rocha, Pedro P., Skok, Jane A.
Udgivet 2013

Finding the Right Partner in a 3D Genome

af Rocha, Pedro P., Chaumeil, Julie, Skok, Jane A.
Udgivet 2013

Response to Casellas et al

af Rocha, Pedro P., Micsinai, Mariann, Kluger, Yuval, Skok, Jane A.
Udgivet 2013

Interpreting 4C-Seq data: how far can we go?

af Raviram, Ramya, Rocha, Pedro P., Bonneau, Richard, Skok, Jane A.
Udgivet i Epigenomics (2014)

Breaking TADs: insights into hierarchical genome organization

af Rocha, Pedro P., Raviram, Ramya, Bonneau, Richard, Skok, Jane A.
Udgivet i Epigenomics (2015)

Correction: Lack of functional and expression homology between human and mouse aldo-keto reductase 1C enzymes: implications for modelling human cancers

af Schrewe Heinrich, Rocha Pedro P, Davies Nicholas J, Veliça Pedro, Ride Jonathan P, Bunce Chris M
Udgivet 2010-01-01

Lack of functional and expression homology between human and mouse aldo-keto reductase 1C enzymes: implications for modelling human cancers

af Veliça, Pedro, Davies, Nicholas J, Rocha, Pedro P, Schrewe, Heinrich, Ride, Jonathan P, Bunce, Chris M
Udgivet 2009

Correction: Lack of functional and expression homology between human and mouse aldo-keto reductase 1C enzymes: implications for modelling human cancers

af Veliça, Pedro, Davies, Nicholas J, Rocha, Pedro P, Schrewe, Heinrich, Ride, Jonathan P, Bunce, Chris M
Udgivet 2010

CTCF establishes discrete functional chromatin domains at the Hox clusters during differentiation

af Narendra, Varun, Rocha, Pedro P., An, Disi, Raviram, Ramya, Skok, Jane A., Mazzoni, Esteban O., Reinberg, Danny
Udgivet i Science (2015)

CRISPR-dCas9 and sgRNA scaffolds enable dual-colour live imaging of satellite sequences and repeat-enriched individual loci

af Fu, Yi, Rocha, Pedro P., Luo, Vincent M., Raviram, Ramya, Deng, Yan, Mazzoni, Esteban O., Skok, Jane A.
Udgivet i Nat Commun (2016)

Identification of multi-loci hubs from 4C-seq demonstrates the functional importance of simultaneous interactions

af Jiang, Tingting, Raviram, Ramya, Snetkova, Valentina, Rocha, Pedro P., Proudhon, Charlotte, Badri, Sana, Bonneau, Richard, Skok, Jane A., Kluger, Yuval
Udgivet i Nucleic Acids Res (2016)

Analysis of 3D genomic interactions identifies candidate host genes that transposable elements potentially regulate

af Raviram, Ramya, Rocha, Pedro P., Luo, Vincent M., Swanzey, Emily, Miraldi, Emily R., Chuong, Edward B., Feschotte, Cédric, Bonneau, Richard, Skok, Jane A.
Udgivet i Genome Biol (2018)

Close proximity to Igh is a contributing factor to AID mediated translocations

af Rocha, Pedro P., Micsinai, Mariann, Kim, JungHyun Rachel, Hewitt, Susannah L., Souza, Patricia P., Trimarchi, Thomas, Strino, Francesco, Parisi, Fabio, Kluger, Yuval, Skok, Jane A.
Udgivet 2012

4C-ker: A Method to Reproducibly Identify Genome-Wide Interactions Captured by 4C-Seq Experiments

af Raviram, Ramya, Rocha, Pedro P., Müller, Christian L., Miraldi, Emily R., Badri, Sana, Fu, Yi, Swanzey, Emily, Proudhon, Charlotte, Snetkova, Valentina, Bonneau, Richard, Skok, Jane A.
Udgivet i PLoS Comput Biol (2016)

Capturing the Onset of PRC2-Mediated Repressive Domain Formation

af Oksuz, Ozgur, Narendra, Varun, Lee, Chul-Hwan, Descostes, Nicolas, LeRoy, Gary, Raviram, Ramya, Blumenberg, Lili, Karch, Kelly, Rocha, Pedro P., Garcia, Benjamin A., Skok, Jane A., Reinberg, Danny
Udgivet i Mol Cell (2018)

Mediator facilitates transcriptional activation and dynamic long-range contacts at the IgH locus during class switch recombination

af Thomas-Claudepierre, Anne-Sophie, Robert, Isabelle, Rocha, Pedro P., Raviram, Ramya, Schiavo, Ebe, Heyer, Vincent, Bonneau, Richard, Luo, Vincent M., Reddy, Janardan K., Borggrefe, Tilman, Skok, Jane A., Reina-San-Martin, Bernardo
Udgivet i J Exp Med (2016)

A Damage-Independent Role for 53BP1 that Impacts Break Order and Igh Architecture during Class Switch Recombination

af Rocha, Pedro P., Raviram, Ramya, Fu, Yi, Kim, JungHyun, Luo, Vincent M., Aljoufi, Arafat, Swanzey, Emily, Pasquarella, Alessandra, Balestrini, Alessia, Miraldi, Emily R., Bonneau, Richard, Petrini, John, Schotta, Gunnar, Skok, Jane A.
Udgivet i Cell Rep (2016)

Cohesin loss alters adult hematopoietic stem cell homeostasis, leading to myeloproliferative neoplasms

af Mullenders, Jasper, Aranda-Orgilles, Beatriz, Lhoumaud, Priscillia, Keller, Matthew, Pae, Juhee, Wang, Kun, Kayembe, Clarisse, Rocha, Pedro P., Raviram, Ramya, Gong, Yixiao, Premsrirut, Prem K., Tsirigos, Aristotelis, Bonneau, Richard, Skok, Jane A., Cimmino, Luisa, Hoehn, Daniela, Aifantis, Iannis
Udgivet i J Exp Med (2015)

Wolf-Hirschhorn Syndrome Candidate-1 is necessary for correct hematopoietic and B cell development

af Campos-Sanchez, Elena, Deleyto-Seldas, Nerea, Dominguez, Veronica, Carrillo-de-Santa-Pau, Enrique, Ura, Kiyoe, Rocha, Pedro P., Kim, JungHyun, Aljoufi, Arafat, Esteve-Codina, Anna, Dabad, Marc, Gut, Marta, Heyn, Holger, Kaneda, Yasufumi, Nimura, Keisuke, Skok, Jane A., Martinez-Frias, Maria Luisa, Cobaleda, Cesar
Udgivet i Cell Rep (2017)

Gata3-controlled nucleosome eviction drives Myc enhancer activity in T-cell development and leukemia

af Belver, Laura, Yang, Alexander Y., Albero, Robert, Herranz, Daniel, Brundu, Francesco G., Quinn, S. Aidan, Pérez-Durán, Pablo, Álvarez, Silvia, Gianni, Francesca, Rashkovan, Marissa, Gurung, Devya, Rocha, Pedro P., Raviram, Ramya, Reglero, Clara, Cortés, Jose R., Cooke, Anisha J., Wendorff, Agnieszka A., Cordó, Valentina, Meijerink, Jules P., Rabadan, Raúl, Ferrando, Adolfo A.
Udgivet i Cancer Discov (2019)