Correlation of Inter-Locus Polyglutamine Toxicity with CAG•CTG Triplet Repeat Expandability and Flanking Genomic DNA GC Content

by Nestor, Colm E., Monckton, Darren G.
Published 2011

No evidence for DNA N(6)-methyladenine in mammals

by Douvlataniotis, Karolos, Bensberg, Maike, Lentini, Antonio, Gylemo, Björn, Nestor, Colm E.
Published in Sci Adv (2020)

TCF/LEF dependent and independent transcriptional regulation of Wnt/β‐catenin target genes

by Doumpas, Nikolaos, Lampart, Franziska, Robinson, Mark D, Lentini, Antonio, Nestor, Colm E, Cantù, Claudio, Basler, Konrad
Published in EMBO J (2018)

DNA methylation in infants with low and high body fatness

by Henriksson, Pontus, Lentini, Antonio, Altmäe, Signe, Brodin, David, Müller, Patrick, Forsum, Elisabet, Nestor, Colm E., Löf, Marie
Published in BMC Genomics (2020)

Comparative analysis of affinity-based 5-hydroxymethylation enrichment techniques

by Thomson, John P., Hunter, Jennifer M., Nestor, Colm E., Dunican, Donncha S., Terranova, Rémi, Moggs, Jonathan G., Meehan, Richard R.
Published 2013

Comparative analysis of affinity-based 5-hydroxymethylation enrichment techniques

by Thomson, John P., Hunter, Jennifer M., Nestor, Colm E., Dunican, Donncha S., Terranova, Rémi, Moggs, Jonathan G., Meehan, Richard R.
Published 2014

Tissue of origin determines cancer-associated CpG island promoter hypermethylation patterns

by Sproul, Duncan, Kitchen, Robert R, Nestor, Colm E, Dixon, J Michael, Sims, Andrew H, Harrison, David J, Ramsahoye, Bernard H, Meehan, Richard R
Published 2012

A reassessment of DNA immunoprecipitation-based genomic profiling

by Lentini, Antonio, Lagerwall, Cathrine, Vikingsson, Svante, Mjoseng, Heidi K., Douvlataniotis, Karolos, Vogt, Hartmut, Green, Henrik, Meehan, Richard R., Benson, Mikael, Nestor, Colm E.
Published in Nat Methods (2018)

Tissue type is a major modifier of the 5-hydroxymethylcytosine content of human genes

by Nestor, Colm E., Ottaviano, Raffaele, Reddington, James, Sproul, Duncan, Reinhardt, Diana, Dunican, Donncha, Katz, Elad, Dixon, J. Michael, Harrison, David J., Meehan, Richard R.
Published 2012

DNA Methylation Changes Separate Allergic Patients from Healthy Controls and May Reflect Altered CD4(+) T-Cell Population Structure

by Nestor, Colm E., Barrenäs, Fredrik, Wang, Hui, Lentini, Antonio, Zhang, Huan, Bruhn, Sören, Jörnsten, Rebecka, Langston, Michael A., Rogers, Gary, Gustafsson, Mika, Benson, Mikael
Published 2014

Promoter DNA methylation couples genome-defence mechanisms to epigenetic reprogramming in the mouse germline

by Hackett, Jamie A., Reddington, James P., Nestor, Colm E., Dunican, Donncha S., Branco, Miguel R., Reichmann, Judith, Reik, Wolf, Surani, M. Azim, Adams, Ian R., Meehan, Richard R.
Published 2012

Potential Involvement of Type I Interferon Signaling in Immunotherapy in Seasonal Allergic Rhinitis

by Mattson, Lina, Lentini, Antonio, Gawel, Danuta R., Badam, Tejaswi V. S., Benson, Mikael, Ledin, Torbjorn, Nestor, Colm E., Gustafsson, Mika, Serra-Musach, Jordi, Bjorkander, Janne, Xiang, Zou, Zhang, Huan
Published in J Immunol Res (2016)

Non-genotoxic carcinogen exposure induces defined changes in the 5-hydroxymethylome

by Thomson, John P, Lempiäinen, Harri, Hackett, Jamie A, Nestor, Colm E, Müller, Arne, Bolognani, Federico, Oakeley, Edward J, Schübeler, Dirk, Terranova, Rémi, Reinhardt, Diana, Moggs, Jonathan G, Meehan, Richard R
Published 2012

Integrated genomic and prospective clinical studies show the importance of modular pleiotropy for disease susceptibility, diagnosis and treatment

by Gustafsson, Mika, Edström, Måns, Gawel, Danuta, Nestor, Colm E, Wang, Hui, Zhang, Huan, Barrenäs, Fredrik, Tojo, James, Kockum, Ingrid, Olsson, Tomas, Serra-Musach, Jordi, Bonifaci, Núria, Pujana, Miguel Angel, Ernerudh, Jan, Benson, Mikael
Published 2014

Rapid reprogramming of epigenetic and transcriptional profiles in mammalian culture systems

by Nestor, Colm E, Ottaviano, Raffaele, Reinhardt, Diana, Cruickshanks, Hazel A, Mjoseng, Heidi K, McPherson, Rhoanne C, Lentini, Antonio, Thomson, John P, Dunican, Donncha S, Pennings, Sari, Anderton, Stephen M, Benson, Mikael, Meehan, Richard R
Published in Genome Biol (2015)

5-Hydroxymethylcytosine Remodeling Precedes Lineage Specification during Differentiation of Human CD4(+) T Cells

by Nestor, Colm E., Lentini, Antonio, Hägg Nilsson, Cathrine, Gawel, Danuta, Gustafsson, Mika, Mattson, Lina, Wang, Hui, Rundquist, Olof, Meehan, Richard R., Klocke, Bernward, Seifert, Martin, Hauck, Stefanie M., Laumen, Helmut, Zhang, Huan, Benson, Mikael
Published in Cell Rep (2016)

LASSIM—A network inference toolbox for genome-wide mechanistic modeling

by Magnusson, Rasmus, Mariotti, Guido Pio, Köpsén, Mattias, Lövfors, William, Gawel, Danuta R., Jörnsten, Rebecka, Linde, Jörg, Nordling, Torbjörn E. M., Nyman, Elin, Schulze, Sylvie, Nestor, Colm E., Zhang, Huan, Cedersund, Gunnar, Benson, Mikael, Tjärnberg, Andreas, Gustafsson, Mika
Published in PLoS Comput Biol (2017)

Redistribution of H3K27me3 upon DNA hypomethylation results in de-repression of Polycomb target genes

by Reddington, James P, Perricone, Sara M, Nestor, Colm E, Reichmann, Judith, Youngson, Neil A, Suzuki, Masako, Reinhardt, Diana, Dunican, Donncha S, Prendergast, James G, Mjoseng, Heidi, Ramsahoye, Bernard H, Whitelaw, Emma, Greally, John M, Adams, Ian R, Bickmore, Wendy A, Meehan, Richard R
Published 2013

Modules, networks and systems medicine for understanding disease and aiding diagnosis

by Gustafsson, Mika, Nestor, Colm E, Zhang, Huan, Barabási, Albert-László, Baranzini, Sergio, Brunak, Sören, Chung, Kian Fan, Federoff, Howard J, Gavin, Anne-Claude, Meehan, Richard R, Picotti, Paola, Pujana, Miguel Àngel, Rajewsky, Nikolaus, Smith, Kenneth GC, Sterk, Peter J, Villoslada, Pablo, Benson, Mikael
Published in Genome Med (2014)

A validated single-cell-based strategy to identify diagnostic and therapeutic targets in complex diseases

by Gawel, Danuta R., Serra-Musach, Jordi, Lilja, Sandra, Aagesen, Jesper, Arenas, Alex, Asking, Bengt, Bengnér, Malin, Björkander, Janne, Biggs, Sophie, Ernerudh, Jan, Hjortswang, Henrik, Karlsson, Jan-Erik, Köpsen, Mattias, Lee, Eun Jung, Lentini, Antonio, Li, Xinxiu, Magnusson, Mattias, Martínez-Enguita, David, Matussek, Andreas, Nestor, Colm E., Schäfer, Samuel, Seifert, Oliver, Sonmez, Ceylan, Stjernman, Henrik, Tjärnberg, Andreas, Wu, Simon, Åkesson, Karin, Shalek, Alex K., Stenmarker, Margaretha, Zhang, Huan, Gustafsson, Mika, Benson, Mikael
Published in Genome Med (2019)