SPEED2: inferring upstream pathway activity from differential gene expression

著者: Rydenfelt, Mattias, Klinger, Bertram, Klünemann, Martina, Blüthgen, Nils
出版年 Nucleic Acids Res (2020)

The cancer cell proteome and transcriptome predicts sensitivity to targeted and cytotoxic drugs

著者: Rydenfelt, Mattias, Wongchenko, Matthew, Klinger, Bertram, Yan, Yibing, Blüthgen, Nils
出版年 Life Sci Alliance (2019)

Discovering causal signaling pathways through gene-expression patterns

著者: Parikh, Jignesh R., Klinger, Bertram, Xia, Yu, Marto, Jarrod A., Blüthgen, Nils
出版事項 2010

Neuronal activity regulates alternative exon usage

著者: Denkena, Johanna, Zaisser, Andrea, Merz, Barbara, Klinger, Bertram, Kuhl, Dietmar, Blüthgen, Nils, Hermey, Guido
出版年 Mol Brain (2020)

An immediate–late gene expression module decodes ERK signal duration

著者: Uhlitz, Florian, Sieber, Anja, Wyler, Emanuel, Fritsche‐Guenther, Raphaela, Meisig, Johannes, Landthaler, Markus, Klinger, Bertram, Blüthgen, Nils
出版年 Mol Syst Biol (2017)

An immediate–late gene expression module decodes ERK signal duration

著者: Uhlitz, Florian, Sieber, Anja, Wyler, Emanuel, Fritsche‐Guenther, Raphaela, Meisig, Johannes, Landthaler, Markus, Klinger, Bertram, Blüthgen, Nils
出版年 Mol Syst Biol (2017)

Comparative Network Reconstruction using mixed integer programming

著者: Bosdriesz, Evert, Prahallad, Anirudh, Klinger, Bertram, Sieber, Anja, Bosma, Astrid, Bernards, René, Blüthgen, Nils, Wessels, Lodewyk F A
出版年 Bioinformatics (2018)

Reverse engineering a hierarchical regulatory network downstream of oncogenic KRAS

著者: Stelniec-Klotz, Iwona, Legewie, Stefan, Tchernitsa, Oleg, Witzel, Franziska, Klinger, Bertram, Sers, Christine, Herzel, Hanspeter, Blüthgen, Nils, Schäfer, Reinhold
出版事項 2012

Perturbation-response genes reveal signaling footprints in cancer gene expression

著者: Schubert, Michael, Klinger, Bertram, Klünemann, Martina, Sieber, Anja, Uhlitz, Florian, Sauer, Sascha, Garnett, Mathew J., Blüthgen, Nils, Saez-Rodriguez, Julio
出版年 Nat Commun (2018)

Drug resistance mechanisms in colorectal cancer dissected with cell type-specific dynamic logic models

著者: Eduati, Federica, Doldàn-Martelli, Victoria, Klinger, Bertram, Cokelaer, Thomas, Sieber, Anja, Kogera, Fiona, Dorel, Mathurin, Garnett, Mathew J, Blüthgen, Nils, Saez-Rodriguez, Julio
出版年 Cancer Res (2017)

Isoform-specific Ras signaling is growth factor dependent

著者: Hood, Fiona E., Klinger, Bertram, Newlaczyl, Anna U., Sieber, Anja, Dorel, Mathurin, Oliver, Simon P., Coulson, Judy M., Blüthgen, Nils, Prior, Ian A.
出版年 Mol Biol Cell (2019)

Multilevel regulation of HIF-1 signaling by TTP

著者: Fähling, Michael, Persson, Anja Bondke, Klinger, Bertram, Benko, Edgar, Steege, Andreas, Kasim, Mumtaz, Patzak, Andreas, Persson, Pontus B., Wolf, Gunter, Blüthgen, Nils, Mrowka, Ralf
出版事項 2012

Network quantification of EGFR signaling unveils potential for targeted combination therapy

著者: Klinger, Bertram, Sieber, Anja, Fritsche-Guenther, Raphaela, Witzel, Franziska, Berry, Leanne, Schumacher, Dirk, Yan, Yibing, Durek, Pawel, Merchant, Mark, Schäfer, Reinhold, Sers, Christine, Blüthgen, Nils
出版事項 2013

Reduced replication origin licensing selectively kills KRAS-mutant colorectal cancer cells via mitotic catastrophe

著者: Gastl, Bastian, Klotz-Noack, Kathleen, Klinger, Bertram, Ispasanie, Sylvia, Salib, Krenoula Hani Fouad, Zuber, Johannes, Mamlouk, Soulafa, Bublitz, Natalie, Blüthgen, Nils, Horst, David, Morkel, Markus, Schäfer, Reinhold, Sers, Christine
出版年 Cell Death Dis (2020)

Cell type-dependent differential activation of ERK by oncogenic KRAS in colon cancer and intestinal epithelium

著者: Brandt, Raphael, Sell, Thomas, Lüthen, Mareen, Uhlitz, Florian, Klinger, Bertram, Riemer, Pamela, Giesecke-Thiel, Claudia, Schulze, Silvia, El-Shimy, Ismail Amr, Kunkel, Desiree, Fauler, Beatrix, Mielke, Thorsten, Mages, Norbert, Herrmann, Bernhard G., Sers, Christine, Blüthgen, Nils, Morkel, Markus
出版年 Nat Commun (2019)

Annexin A1 sustains tumor metabolism and cellular proliferation upon stable loss of HIF1A

著者: Rohwer, Nadine, Bindel, Fabian, Grimm, Christina, Lin, Suling J., Wappler, Jessica, Klinger, Bertram, Blüthgen, Nils, Du Bois, Ilona, Schmeck, Bernd, Lehrach, Hans, de Graauw, Marjo, Goncalves, Emanuel, Saez-Rodriguez, Julio, Tan, Patrick, Grabsch, Heike I., Prigione, Alessandro, Kempa, Stefan, Cramer, Thorsten
出版年 Oncotarget (2015)

Hypoxia-induced gene expression results from selective mRNA partitioning to the endoplasmic reticulum

著者: Staudacher, Jonas J., Naarmann-de Vries, Isabel S., Ujvari, Stefanie J., Klinger, Bertram, Kasim, Mumtaz, Benko, Edgar, Ostareck-Lederer, Antje, Ostareck, Dirk H., Bondke Persson, Anja, Lorenzen, Stephan, Meier, Jochen C., Blüthgen, Nils, Persson, Pontus B., Henrion-Caude, Alexandra, Mrowka, Ralf, Fähling, Michael
出版年 Nucleic Acids Res (2015)