Getting Started in Computational Immunology

Por Kleinstein, Steven H.
Publicado em 2008

Practical guidelines for B-cell receptor repertoire sequencing analysis

Por Yaari, Gur, Kleinstein, Steven H.
Publicado no Genome Med (2015)

A spectral clustering-based method for identifying clones from high-throughput B cell repertoire sequencing data

Por Nouri, Nima, Kleinstein, Steven H
Publicado no Bioinformatics (2018)

Optimized Threshold Inference for Partitioning of Clones From High-Throughput B Cell Repertoire Sequencing Data

Por Nouri, Nima, Kleinstein, Steven H.
Publicado no Front Immunol (2018)

Quantifying selection in high-throughput Immunoglobulin sequencing data sets

Por Yaari, Gur, Uduman, Mohamed, Kleinstein, Steven H.
Publicado em 2012

Somatic hypermutation targeting is influenced by location within the Immunoglobulin V region

Por Cohen, Reuma Magori, Kleinstein, Steven H., Louzoun, Yoram
Publicado em 2011

Cell subset prediction for blood genomic studies

Por Bolen, Christopher R, Uduman, Mohamed, Kleinstein, Steven H
Publicado em 2011

Biomedical Model Fitting and Error Analysis

Por Costa, Kevin D., Kleinstein, Steven H., Hershberg, Uri
Publicado em 2011

Quantitative set analysis for gene expression: a method to quantify gene set differential expression including gene-gene correlations

Por Yaari, Gur, Bolen, Christopher R., Thakar, Juilee, Kleinstein, Steven H.
Publicado em 2013

Computational resources for high-dimensional immune analysis from the Human Immunology Project Consortium

Por Brusic, Vladimir, Gottardo, Raphael, Kleinstein, Steven H, Davis, Mark M
Publicado no Nat Biotechnol (2014)

Automated analysis of high-throughput B-cell sequencing data reveals a high frequency of novel immunoglobulin V gene segment alleles

Por Gadala-Maria, Daniel, Yaari, Gur, Uduman, Mohamed, Kleinstein, Steven H.
Publicado no Proc Natl Acad Sci U S A (2015)

Dynamic expression profiling of type I and type III interferon-stimulated hepatocytes reveals a stable hierarchy of gene expression

Por Bolen, Christopher R., Ding, Siyuan, Robek, Michael D., Kleinstein, Steven H.
Publicado em 2014

Gene Expression Gradients along the Tonotopic Axis of the Chicken Auditory Epithelium

Por Frucht, Corey S., Uduman, Mohamed, Kleinstein, Steven H., Santos-Sacchi, Joseph, Navaratnam, Dhasakumar S.
Publicado em 2011

RAG1 targeting in the genome is dominated by chromatin interactions mediated by the non-core regions of RAG1 and RAG2

Por Maman, Yaakov, Teng, Grace, Seth, Rashu, Kleinstein, Steven H., Schatz, David G.
Publicado no Nucleic Acids Res (2016)

Overcoming NS1-Mediated Immune Antagonism Involves Both Interferon-Dependent and Independent Mechanisms

Por Thakar, Juilee, Schmid, Sonja, Duke, Jamie L., García-Sastre, Adolfo, Kleinstein, Steven H.
Publicado em 2013

Activated germinal center B cells undergo directed migration

Por O’Connor, Mark J., Hauser, Anja E., Haberman, Ann M., Kleinstein, Steven H.
Publicado no Int J Data Min Bioinform (2011)

Integrating B cell lineage information into statistical tests for detecting selection in Ig sequences()

Por Uduman, Mohamed, Shlomchik, Mark J., Vigneault, Francois, Church, George M., Kleinstein, Steven H.
Publicado no J Immunol (2013)

Comparative analysis of anti-viral transcriptomics reveals novel effects of influenza immune antagonism

Por Thakar, Juilee, Hartmann, Boris M., Marjanovic, Nada, Sealfon, Stuart C., Kleinstein, Steven H.
Publicado no BMC Immunol (2015)

TLR4 ligands LPS and MPLA differentially regulate effector and memory CD8(+) T cell differentiation

Por Cui, Weiguo, Joshi, Nikhil S., Liu, Ying, Meng, Hailong, Kleinstein, Steven H, Kaech, Susan M.
Publicado em 2014

Polycomb repressive complex 2-mediated chromatin repression guides effector CD8(+) T cell terminal differentiation and loss of multipotency

Por Gray, Simon M., Amezquita, Robert A., Guan, Tianxia, Kleinstein, Steven H., Kaech, Susan M.
Publicado no Immunity (2017)