Flexible mixture modeling via the multivariate t distribution with the Box-Cox transformation: an alternative to the skew-t distribution

מאת Lo, Kenneth, Gottardo, Raphael
יצא לאור 2012

Comparability and reproducibility of biomedical data

מאת Huang, Yunda, Gottardo, Raphael
יצא לאור 2013

Bayesian hierarchical modeling for subject-level response classification in peptide microarray immunoassays

מאת Imholte, Gregory, Gottardo, Raphael
הוצא לאור ב Biometrics (2016)

CytoML for cross‐platform cytometry data sharing

מאת Finak, Greg, Jiang, Wenxin, Gottardo, Raphael
הוצא לאור ב Cytometry A (2018)

The contribution of cell cycle to heterogeneity in single-cell RNA-seq data

מאת McDavid, Andrew, Finak, Greg, Gottardo, Raphael
הוצא לאור ב Nat Biotechnol (2016)

Merging Mixture Components for Cell Population Identification in Flow Cytometry

מאת Finak, Greg, Bashashati, Ali, Brinkman, Ryan, Gottardo, Raphaël
יצא לאור 2009

ggCyto: next generation open-source visualization software for cytometry

מאת Van, Phu, Jiang, Wenxin, Gottardo, Raphael, Finak, Greg
הוצא לאור ב Bioinformatics (2018)

flowClust: a Bioconductor package for automated gating of flow cytometry data

מאת Lo, Kenneth, Hahne, Florian, Brinkman, Ryan R, Gottardo, Raphael
יצא לאור 2009

Optimizing transformations for automated, high throughput analysis of flow cytometry data

מאת Finak, Greg, Perez, Juan-Manuel, Weng, Andrew, Gottardo, Raphael
יצא לאור 2010

GRAPHICAL MODELS FOR ZERO-INFLATED SINGLE CELL GENE EXPRESSION

מאת McDavid, Andrew, Gottardo, Raphael, Simon, Noah, Drton, Mathias
הוצא לאור ב Ann Appl Stat (2019)

Recent Bioinformatics Advances in the Analysis of High Throughput Flow Cytometry Data

מאת Gottardo, Raphael, Brinkman, Ryan R., Luta, George, Wand, Matt P.
יצא לאור 2009

QUAliFiER: An automated pipeline for quality assessment of gated flow cytometry data

מאת Finak, Greg, Jiang, Wenxin, Pardo, Jorge, Asare, Adam, Gottardo, Raphael
יצא לאור 2012

PING 2.0: an R/Bioconductor package for nucleosome positioning using next-generation sequencing data

מאת Woo, Sangsoon, Zhang, Xuekui, Sauteraud, Renan, Robert, François, Gottardo, Raphael
יצא לאור 2013

Computational resources for high-dimensional immune analysis from the Human Immunology Project Consortium

מאת Brusic, Vladimir, Gottardo, Raphael, Kleinstein, Steven H, Davis, Mark M
הוצא לאור ב Nat Biotechnol (2014)

Probabilistic Inference for Nucleosome Positioning with MNase-Based or Sonicated Short-Read Data

מאת Zhang, Xuekui, Robertson, Gordon, Woo, Sangsoon, Hoffman, Brad G., Gottardo, Raphael
יצא לאור 2012

Combining Mixture Components for Clustering*

מאת Baudry, Jean-Patrick, Raftery, Adrian E., Celeux, Gilles, Lo, Kenneth, Gottardo, Raphaël
יצא לאור 2010

An Integrated Pipeline for the Genome-Wide Analysis of Transcription Factor Binding Sites from ChIP-Seq

מאת Mercier, Eloi, Droit, Arnaud, Li, Leping, Robertson, Gordon, Zhang, Xuekui, Gottardo, Raphael
יצא לאור 2011

MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis

מאת Chu, Vu T, Gottardo, Raphael, Raftery, Adrian E, Bumgarner, Roger E, Yeung, Ka Yee
יצא לאור 2008

iBMQ: a R/Bioconductor package for integrated Bayesian modeling of eQTL data

מאת Imholte, Greg C., Scott-Boyer, Marie-Pier, Labbe, Aurélie, Deschepper, Christian F., Gottardo, Raphael
יצא לאור 2013

flowDensity: reproducing manual gating of flow cytometry data by automated density-based cell population identification

מאת Malek, Mehrnoush, Taghiyar, Mohammad Jafar, Chong, Lauren, Finak, Greg, Gottardo, Raphael, Brinkman, Ryan R.
הוצא לאור ב Bioinformatics (2015)