Mut2Vec: distributed representation of cancerous mutations

by Kim, Sunkyu, Lee, Heewon, Kim, Keonwoo, Kang, Jaewoo
Published in BMC Med Genomics (2018)

Induction of ribosomal genes and hepatocyte hypertrophy by adenovirus-mediated expression of c-Myc in vivo

by Kim, Sunkyu, Li, Qing, Dang, Chi V., Lee, Linda A.
Published 2000

In silico drug combination discovery for personalized cancer therapy

by Jeon, Minji, Kim, Sunkyu, Park, Sungjoon, Lee, Heewon, Kang, Jaewoo
Published in BMC Syst Biol (2018)

Improved survival analysis by learning shared genomic information from pan-cancer data

by Kim, Sunkyu, Kim, Keonwoo, Choe, Junseok, Lee, Inggeol, Kang, Jaewoo
Published in Bioinformatics (2020)

Predicting mechanism of action of novel compounds using compound structure and transcriptomic signature coembedding

by Jang, Gwanghoon, Park, Sungjoon, Lee, Sanghoon, Kim, Sunkyu, Park, Sejeong, Kang, Jaewoo
Published in Bioinformatics (2021)

BioBERT: a pre-trained biomedical language representation model for biomedical text mining

by Lee, Jinhyuk, Yoon, Wonjin, Kim, Sungdong, Kim, Donghyeon, Kim, Sunkyu, So, Chan Ho, Kang, Jaewoo
Published in Bioinformatics (2020)

BRONCO: Biomedical entity Relation ONcology COrpus for extracting gene-variant-disease-drug relations

by Lee, Kyubum, Lee, Sunwon, Park, Sungjoon, Kim, Sunkyu, Kim, Suhkyung, Choi, Kwanghun, Tan, Aik Choon, Kang, Jaewoo
Published in Database (Oxford) (2016)

HiPub: translating PubMed and PMC texts to networks for knowledge discovery

by Lee, Kyubum, Shin, Wonho, Kim, Byounggun, Lee, Sunwon, Choi, Yonghwa, Kim, Sunkyu, Jeon, Minji, Tan, Aik Choon, Kang, Jaewoo
Published in Bioinformatics (2016)

Deep learning of mutation-gene-drug relations from the literature

by Lee, Kyubum, Kim, Byounggun, Choi, Yonghwa, Kim, Sunkyu, Shin, Wonho, Lee, Sunwon, Park, Sungjoon, Kim, Seongsoon, Tan, Aik Choon, Kang, Jaewoo
Published in BMC Bioinformatics (2018)

BEST: Next-Generation Biomedical Entity Search Tool for Knowledge Discovery from Biomedical Literature

by Lee, Sunwon, Kim, Donghyeon, Lee, Kyubum, Choi, Jaehoon, Kim, Seongsoon, Jeon, Minji, Lim, Sangrak, Choi, Donghee, Kim, Sunkyu, Tan, Aik-Choon, Kang, Jaewoo
Published in PLoS One (2016)

ChimerDB 3.0: an enhanced database for fusion genes from cancer transcriptome and literature data mining

by Lee, Myunggyo, Lee, Kyubum, Yu, Namhee, Jang, Insu, Choi, Ikjung, Kim, Pora, Jang, Ye Eun, Kim, Byounggun, Kim, Sunkyu, Lee, Byungwook, Kang, Jaewoo, Lee, Sanghyuk
Published in Nucleic Acids Res (2017)

Functional, chemical genomic, and super-enhancer screening identify sensitivity to cyclin D1/CDK4 pathway inhibition in Ewing sarcoma

by Kennedy, Alyssa L., Vallurupalli, Mounica, Chen, Liying, Crompton, Brian, Cowley, Glenn, Vazquez, Francisca, Weir, Barbara A., Tsherniak, Aviad, Parasuraman, Sudha, Kim, Sunkyu, Alexe, Gabriela, Stegmaier, Kimberly
Published in Oncotarget (2015)

ChimerDB 4.0: an updated and expanded database of fusion genes

by Jang, Ye Eun, Jang, Insu, Kim, Sunkyu, Cho, Subin, Kim, Daehan, Kim, Keonwoo, Kim, Jaewon, Hwang, Jimin, Kim, Sangok, Kim, Jaesang, Kang, Jaewoo, Lee, Byungwook, Lee, Sanghyuk
Published in Nucleic Acids Res (2020)

Building a PubMed knowledge graph

by Xu, Jian, Kim, Sunkyu, Song, Min, Jeong, Minbyul, Kim, Donghyeon, Kang, Jaewoo, Rousseau, Justin F., Li, Xin, Xu, Weijia, Torvik, Vetle I., Bu, Yi, Chen, Chongyan, Ebeid, Islam Akef, Li, Daifeng, Ding, Ying
Published in Sci Data (2020)

Synergistic Drug Combinations with a CDK4/6 Inhibitor in T-cell Acute Lymphoblastic Leukemia

by Pikman, Yana, Alexe, Gabriela, Roti, Giovanni, Conway, Amy Saur, Furman, Andrew, Lee, Emily S., Place, Andrew E., Kim, Sunkyu, Saran, Chitra, Modiste, Rebecca, Weinstock, David M., Harris, Marian, Kung, Andrew L., Silverman, Lewis B., Stegmaier, Kimberly
Published in Clin Cancer Res (2016)

The potent and selective cyclin-dependent kinases 4 and 6 inhibitor ribociclib (LEE011) is a versatile combination partner in preclinical cancer models

by Kim, Sunkyu, Tiedt, Ralph, Loo, Alice, Horn, Thomas, Delach, Scott, Kovats, Steven, Haas, Kristy, Engstler, Barbara Schacher, Cao, Alexander, Pinzon-Ortiz, Maria, Mulford, Iain, Acker, Michael G., Chopra, Rajiv, Brain, Christopher, di Tomaso, Emmanuelle, Sellers, William R., Caponigro, Giordano
Published in Oncotarget (2018)

Correction: The potent and selective cyclin-dependent kinases 4 and 6 inhibitor ribociclib (LEE011) is a versatile combination partner in preclinical cancer models

by Kim, Sunkyu, Tiedt, Ralph, Loo, Alice, Horn, Thomas, Delach, Scott, Kovats, Steven, Haas, Kristy, Engstler, Barbara Schacher, Cao, Alexander, Pinzon-Ortiz, Maria, Mulford, Iain, Acker, Michael G., Chopra, Rajiv, Brain, Christopher, Tomaso, Emmanuelle di, Sellers, William R., Caponigro, Giordano
Published in Oncotarget (2020)

Dual CDK4/CDK6 Inhibition Induces Cell Cycle Arrest and Senescence in Neuroblastoma

by Rader, JulieAnn, Russell, Mike R., Hart, Lori S., Nakazawa, Michael S., Belcastro, Lili T., Martinez, Daniel, Li, Yimei, Carpenter, Erica L., Attiyeh, Edward F., Diskin, Sharon J., Kim, Sunkyu, Parasuraman, Sudha, Caponigro, Giordano, Schnepp, Robert W., Wood, Andrew C., Pawel, Bruce, Cole, Kristina A., Maris, John M.
Published 2013

Dual ALK and CDK4/6 inhibition demonstrates synergy against neuroblastoma

by Wood, Andrew C., Krytska, Kateryna, Ryles, Hannah, Infarinato, Nicole, Sano, Renata, Hansel, Theodore, Hart, Lori, King, Frederick J., Smith, Timothy R., Ainscow, Edward, Grandinetti, Kathryn B., Tuntland, Tove, Kim, Sunkyu, Caponigro, Giordano, He, You Qun, Krupa, Shiva, Li, Nanxin, Harris, Jennifer L., Mossé, Yaël P.
Published in Clin Cancer Res (2016)

CDK 4/6 inhibitors sensitize PIK3CA Mutant Breast Cancer to PI3K inhibitors

by Vora, Sadhna R., Juric, Dejan, Kim, Nayoon, Mino-Kenudson, Mari, Huynh, Tiffany, Costa, Carlotta, Lockerman, Elizabeth L., Pollack, Sarah F., Liu, Manway, Li, Xiaoyan, Lehar, Joseph, Wiesmann, Marion, Wartmann, Markus, Chen, Yan, Cao, Z. Alexander, Pinzon-Ortiz, Maria, Kim, Sunkyu, Schlegel, Robert, Huang, Alan, Engelman, Jeffrey A.
Published 2014