Facile Enzymatic Synthesis of Base J-Containing Oligodeoxyribonucleotides and an Analysis of the Impact of Base J on DNA Replication in Cells

door Ji, Debin, Wang, Yinsheng
Gepubliceerd in 2014

Polymerase-amplified release of ATP (POLARA) for detecting single nucleotide variants in RNA and DNA

door Mohsen, Michael G., Ji, Debin, Kool, Eric T.
Gepubliceerd in Chem Sci (2019)

Polymerase synthesis of four-base DNA from two stable dimeric nucleotides

door Mohsen, Michael G, Ji, Debin, Kool, Eric T
Gepubliceerd in Nucleic Acids Res (2019)

Effects of Tet-induced Oxidation Products of 5-Methylcytosine on Dnmt1- and DNMT3a-mediated Cytosine Methylation

door Ji, Debin, Lin, Krystal, Song, Jikui, Wang, Yinsheng
Gepubliceerd in 2014

Comprehensive Characterization of (S)GTP-Binding Proteins by Orthogonal Quantitative (S)GTP-Affinity Profiling and (S)GTP/GTP Competition Assays

door Xiao, Yongsheng, Ji, Debin, Guo, Lei, Wang, Yinsheng
Gepubliceerd in 2014

Effects of Tet-Induced Oxidation Products of 5-Methylcytosine on DNA Replication in Mammalian Cells

door Ji, Debin, You, Changjun, Wang, Pengcheng, Wang, Yinsheng
Gepubliceerd in 2014

Effects of Tet-mediated Oxidation Products of 5-Methylcytosine on DNA Transcription in vitro and in Mammalian Cells

door You, Changjun, Ji, Debin, Dai, Xiaoxia, Wang, Yinsheng
Gepubliceerd in Sci Rep (2014)

ATP-Linked Chimeric Nucleotide as a Specific Luminescence Reporter of Deoxyuridine Triphosphatase

door Ji, Debin, Kietrys, Anna M., Lee, Yujeong, Kool, Eric T.
Gepubliceerd in Bioconjug Chem (2018)

ATP-releasing Nucleotides: Linking DNA Synthesis to Luciferase Signaling

door Ji, Debin, Mohsen, Michael G., Harcourt, Emily M., Kool, Eric T.
Gepubliceerd in Angew Chem Int Ed Engl (2016)

A Chimeric ATP-Linked Nucleotide Enables Luminescence Signaling of Damage Surveillance by MTH1, a Cancer Target

door Ji, Debin, Beharry, Andrew A., Ford, James M., Kool, Eric T.
Gepubliceerd in J Am Chem Soc (2016)

Fragmentation of Electrospray-produced Deprotonated Ions of Oligodeoxyribonucleotides Containing an Alkylated or Oxidized Thymidine

door Wang, Pengcheng, Williams, Renee T., Guerrero, Candace R., Ji, Debin, Wang, Yinsheng
Gepubliceerd in 2014

Quantitative Mass Spectrometry-Based Analysis of β-D-Glucosyl-5-hydroxymethyluracil in Genomic DNA of Trypanosoma brucei

door Liu, Shuo, Ji, Debin, Cliffe, Laura, Bullard, Whitney, Sabatini, Robert, Wang, Yinsheng
Gepubliceerd in 2014

Measuring deaminated nucleotide surveillance enzyme ITPA activity with an ATP-releasing nucleotide chimera

door Ji, Debin, Stepchenkova, Elena I., Cui, Jian, Menezes, Miriam R., Pavlov, Youri I., Kool, Eric T.
Gepubliceerd in Nucleic Acids Res (2017)

Replication studies of carboxymethylated DNA lesions in human cells

door Wu, Jun, Wang, Pengcheng, Li, Lin, Williams, Nicole L., Ji, Debin, Zahurancik, Walter J., You, Changjun, Wang, Jianshuang, Suo, Zucai, Wang, Yinsheng
Gepubliceerd in Nucleic Acids Res (2017)

Potent and Selective Inhibitors of 8-Oxoguanine DNA Glycosylase

door Tahara, Yu-ki, Auld, Douglas, Ji, Debin, Beharry, Andrew A., Kietrys, Anna M., Wilson, David L., Jimenez, Marta, King, Daniel, Nguyen, Zachary, Kool, Eric T.
Gepubliceerd in J Am Chem Soc (2018)

Structural basis for DNMT3A-mediated de novo DNA methylation

door Zhang, Zhi-Min, Lu, Rui, Wang, Pengcheng, Yu, Yang, Chen, Dong-Liang, Gao, Linfeng, Liu, Shuo, Ji, Debin, Rothbart, Scott B, Wang, Yinsheng, Wang, Gang Greg, Song, Jikui
Gepubliceerd in Nature (2018)

Tet-Mediated Formation of 5-Hydroxymethylcytosine in RNA

door Fu, Lijuan, Guerrero, Candace R., Zhong, Na, Amato, Nicholas J., Liu, Yunhua, Liu, Shuo, Cai, Qian, Ji, Debin, Jin, Seung-Gi, Niedernhofer, Laura J., Pfeifer, Gerd P., Xu, Guo-Liang, Wang, Yinsheng
Gepubliceerd in 2014

The Existence of MTH1-independent 8-oxodGTPase Activity in Cancer Cells as a Compensatory Mechanism against On-target Effects of MTH1 Inhibitors

door Samaranayake, Govindi J., Troccoli, Clara I., Zhang, Ling, Huynh, Mai, Jayaraj, Christina J., Ji, Debin, McPherson, Lisa, Onishi, Yoshiyuki, Nguyen, Dao M., Robbins, David J., Karbaschi, Mahsa, Cooke, Marcus S., Barrientos, Antonio, Kool, Eric T., Rai, Priyamvada
Gepubliceerd in Mol Cancer Ther (2019)

Increased MTH1-specific 8-oxodGTPase activity is a hallmark of cancer in colon, lung and pancreatic tissue

door McPherson, Lisa A., Troccoli, Clara I., Ji, Debin, Bowles, Annie E., Gardiner, Makelle L., Mohsen, Michael G., Nagathihalli, Nagaraj S., Nguyen, Dao M., Robbins, David J., Merchant, Nipun B., Kool, Eric T., Rai, Priyamvada, Ford, James M.
Gepubliceerd in DNA Repair (Amst) (2019)