High-resolution spatial normalization for microarrays containing embedded technical replicates

Tekijä Yuan, Daniel S., Irizarry, Rafael A.
Julkaistu 2006

A framework for oligonucleotide microarray preprocessing

Tekijä Carvalho, Benilton S., Irizarry, Rafael A.
Julkaistu 2010

Accounting for GC-content bias reduces systematic errors and batch effects in ChIP-seq data

Tekijä Teng, Mingxiang, Irizarry, Rafael A.
Julkaisussa Genome Res (2017)

Model-Based Quality Assessment and Base-Calling for Second-Generation Sequencing Data

Tekijä Bravo, Héctor Corrada, Irizarry, Rafael A.
Julkaistu 2010

Stochastic epigenetic variation as a driving force of development, evolutionary adaptation, and disease

Tekijä Feinberg, Andrew P., Irizarry, Rafael A.
Julkaistu 2009

A Gene Expression Barcode for Microarray Data

Tekijä Zilliox, Michael J., Irizarry, Rafael A.
Julkaistu 2007

Accounting for cellular heterogeneity is critical in epigenome-wide association studies

Tekijä Jaffe, Andrew E, Irizarry, Rafael A
Julkaistu 2014

quantro: a data-driven approach to guide the choice of an appropriate normalization method

Tekijä Hicks, Stephanie C., Irizarry, Rafael A.
Julkaisussa Genome Biol (2015)

A Guide to Teaching Data Science

Tekijä Hicks, Stephanie C., Irizarry, Rafael A.
Julkaisussa Am Stat (2018)

methylCC: technology-independent estimation of cell type composition using differentially methylated regions

Tekijä Hicks, Stephanie C., Irizarry, Rafael A.
Julkaisussa Genome Biol (2019)

Quantile normalization of single-cell RNA-seq read counts without unique molecular identifiers

Tekijä Townes, F. William, Irizarry, Rafael A.
Julkaisussa Genome Biol (2020)

Consolidated strategy for the analysis of microarray spike-in data

Tekijä McCall, Matthew N., Irizarry, Rafael A.
Julkaistu 2008

Thawing Frozen Robust Multi-array Analysis (fRMA)

Tekijä McCall, Matthew N, Irizarry, Rafael A
Julkaistu 2011

Feature-level exploration of a published Affymetrix GeneChip control dataset

Tekijä Irizarry, Rafael A, Cope, Leslie M, Wu, Zhijin
Julkaistu 2006

Quantifying uncertainty in genotype calls

Tekijä Carvalho, Benilton S., Louis, Thomas A., Irizarry, Rafael A.
Julkaistu 2010

A species-generalized probabilistic model-based definition of CpG islands

Tekijä Irizarry, Rafael A., Wu, Hao, Feinberg, Andrew P.
Julkaistu 2009

Intensity normalization improves color calling in SOLiD sequencing

Tekijä Wu, Hao, Irizarry, Rafael A., Bravo, Héctor Corrada
Julkaistu 2010

Removing technical variability in RNA-seq data using conditional quantile normalization

Tekijä Hansen, Kasper D., Irizarry, Rafael A., WU, Zhijin
Julkaistu 2012

BSmooth: from whole genome bisulfite sequencing reads to differentially methylated regions

Tekijä Hansen, Kasper D, Langmead, Benjamin, Irizarry, Rafael A
Julkaistu 2012

Overcoming bias and systematic errors in next generation sequencing data

Tekijä Taub, Margaret A, Corrada Bravo, Hector, Irizarry, Rafael A
Julkaistu 2010