ChromaSig: A Probabilistic Approach to Finding Common Chromatin Signatures in the Human Genome

Por Hon, Gary, Ren, Bing, Wang, Wei
Publicado em 2008

Discovery and Annotation of Functional Chromatin Signatures in the Human Genome

Por Hon, Gary, Wang, Wei, Ren, Bing
Publicado em 2009

Predictive chromatin signatures in the mammalian genome

Por Hon, Gary C., Hawkins, R. David, Ren, Bing
Publicado em 2009

Next-Generation Genomics: an Integrative Approach

Por Hawkins, R. David, Hon, Gary C., Ren, Bing
Publicado em 2010

WebLogo: A Sequence Logo Generator

Por Crooks, Gavin E., Hon, Gary, Chandonia, John-Marc, Brenner, Steven E.
Publicado em 2004

CBX3 regulates efficient RNA processing genome-wide

Por Smallwood, Andrea, Hon, Gary C., Jin, Fulai, Henry, Ryan E., Espinosa, Joaquín M., Ren, Bing
Publicado em 2012

The ASTRAL Compendium in 2004

Por Chandonia, John-Marc, Hon, Gary, Walker, Nigel S., Lo Conte, Loredana, Koehl, Patrice, Levitt, Michael, Brenner, Steven E.
Publicado em 2004

Tet-assisted bisulfite sequencing of 5-hydroxymethylcytosine

Por Yu, Miao, Hon, Gary C, Szulwach, Keith E, Song, Chun-Xiao, Jin, Peng, Ren, Bing, He, Chuan
Publicado em 2012

Adult tissue methylomes harbor epigenetic memory at embryonic enhancers

Por Hon, Gary C., Rajagopal, Nisha, Shen, Yin, McCleary, David F., Yue, Feng, Dang, My D., Ren, Bing
Publicado em 2013

m(6)A-dependent regulation of messenger RNA stability

Por Wang, Xiao, Lu, Zhike, Gomez, Adrian, Hon, Gary C., Yue, Yanan, Han, Dali, Fu, Ye, Parisien, Marc, Dai, Qing, Jia, Guifang, Ren, Bing, Pan, Tao, He, Chuan
Publicado em 2013

Base-Resolution Analysis of 5-Hydroxymethylcytosine in the Mammalian Genome

Por Yu, Miao, Hon, Gary C., Szulwach, Keith E., Song, Chun-Xiao, Zhang, Liang, Kim, Audrey, Li, Xuekun, Dai, Qing, Park, Beomseok, Min, Jung-Hyun, Jin, Peng, Ren, Bing, He, Chuan
Publicado em 2012

Tet-mediated covalent labelling of 5-methylcytosine for its genome-wide detection and sequencing

Por Zhang, Liang, Szulwach, Keith E., Hon, Gary C., Song, Chun-Xiao, Park, Beomseok, Yu, Miao, Lu, Xingyu, Dai, Qing, Wang, Xiao, Street, Craig R., Tan, Huiping, Min, Jung-Hyun, Ren, Bing, Jin, Peng, He, Chuan
Publicado em 2013

5mC oxidation by Tet2 modulates enhancer activity and timing of transcriptome reprogramming during differentiation

Por Hon, Gary C., Song, Chun-Xiao, Du, Tingting, Jin, Fulai, Selvaraj, Siddarth, Lee, Ah Young, Yen, Chia-an, Ye, Zhen, Mao, Shi-Qing, Wang, Bang-An, Kuan, Samantha, Edsall, Lee E., Zhao, Boxuan Simen, Xu, Guo-Liang, He, Chuan, Ren, Bing
Publicado no Mol Cell (2014)

Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells

Por Lister, Ryan, Pelizzola, Mattia, Kida, Yasuyuki S., Hawkins, R. David, Nery, Joseph R., Hon, Gary, Antosiewicz-Bourget, Jessica, O'Malley, Ronan, Castanon, Rosa, Klugman, Sarit, Downes, Michael, Yu, Ruth, Stewart, Ron, Ren, Bing, Thomson, James A., Evans, Ronald M., Ecker, Joseph R.
Publicado em 2011

Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer

Por Hon, Gary C., Hawkins, R. David, Caballero, Otavia L., Lo, Christine, Lister, Ryan, Pelizzola, Mattia, Valsesia, Armand, Ye, Zhen, Kuan, Samantha, Edsall, Lee E., Camargo, Anamaria Aranha, Stevenson, Brian J., Ecker, Joseph R., Bafna, Vineet, Strausberg, Robert L., Simpson, Andrew J., Ren, Bing
Publicado em 2012

Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae

Por Reguly, Teresa, Breitkreutz, Ashton, Boucher, Lorrie, Breitkreutz, Bobby-Joe, Hon, Gary C, Myers, Chad L, Parsons, Ainslie, Friesen, Helena, Oughtred, Rose, Tong, Amy, Stark, Chris, Ho, Yuen, Botstein, David, Andrews, Brenda, Boone, Charles, Troyanskya, Olga G, Ideker, Trey, Dolinski, Kara, Batada, Nizar N, Tyers, Mike
Publicado em 2006

Human DNA methylomes at base resolution show widespread epigenomic differences

Por Lister, Ryan, Pelizzola, Mattia, Dowen, Robert H., Hawkins, R. David, Hon, Gary, Tonti-Filippini, Julian, Nery, Joseph R., Lee, Leonard, Ye, Zhen, Ngo, Que-Minh, Edsall, Lee, Antosiewicz-Bourget, Jessica, Stewart, Ron, Ruotti, Victor, Millar, A. Harvey, Thomson, James A., Ren, Bing, Ecker, Joseph R.
Publicado em 2009

Dynamic chromatin states in human ES cells reveal potential regulatory sequences and genes involved in pluripotency

Por Hawkins, R David, Hon, Gary C, Yang, Chuhu, Antosiewicz-Bourget, Jessica E, Lee, Leonard K, Ngo, Que-Minh, Klugman, Sarit, Ching, Keith A, Edsall, Lee E, Ye, Zhen, Kuan, Samantha, Yu, Pengzhi, Liu, Hui, Zhang, Xinmin, Green, Roland D, Lobanenkov, Victor V, Stewart, Ron, Thomson, James A, Ren, Bing
Publicado em 2011

Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis

Por Chang, Katherine Noelani, Zhong, Shan, Weirauch, Matthew T, Hon, Gary, Pelizzola, Mattia, Li, Hai, Huang, Shao-shan Carol, Schmitz, Robert J, Urich, Mark A, Kuo, Dwight, Nery, Joseph R, Qiao, Hong, Yang, Ally, Jamali, Abdullah, Chen, Huaming, Ideker, Trey, Ren, Bing, Bar-Joseph, Ziv, Hughes, Timothy R, Ecker, Joseph R
Publicado em 2013

Distinct Epigenomic Landscapes of Pluripotent and Lineage-committed Human Cells

Por Hawkins, R. David, Hon, Gary C., Lee, Leonard K., Ngo, QueMinh, Lister, Ryan, Pelizzola, Mattia, Edsall, Lee E., Kuan, Samantha, Luu, Ying, Klugman, Sarit, Antosiewicz-Bourget, Jessica, Ye, Zhen, Espinoza, Celso, Agarwahl, Saurabh, Shen, Li, Ruotti, Victor, Wang, Wei, Stewart, Ron, Thomson, James A., Ecker, Joseph R., Ren, Bing
Publicado em 2010