Characterization of E3(Histone), a Novel Testis Ubiquitin Protein Ligase Which Ubiquitinates Histones

door Liu, Zhiqian, Oughtred, Rose, Wing, Simon S.
Gepubliceerd in 2005

Inferring protein function from homology using the Princeton Protein Orthology Database (P-POD)

door Livstone, Michael S., Oughtred, Rose, Heinicke, Sven, Vernot, Benjamin, Huttenhower, Curtis, Durand, Dannie, Dolinski, Kara
Gepubliceerd in 2011

The Princeton Protein Orthology Database (P-POD): A Comparative Genomics Analysis Tool for Biologists

door Heinicke, Sven, Livstone, Michael S., Lu, Charles, Oughtred, Rose, Kang, Fan, Angiuoli, Samuel V., White, Owen, Botstein, David, Dolinski, Kara
Gepubliceerd in 2007

RLIMS-P: an online text-mining tool for literature-based extraction of protein phosphorylation information

door Torii, Manabu, Li, Gang, Li, Zhiwen, Oughtred, Rose, Diella, Francesca, Çelen, Irem, Arighi, Cecilia N., Huang, Hongzhan, Vijay-Shanker, K., Wu, Cathy H.
Gepubliceerd in 2014

The PhosphoGRID Saccharomyces cerevisiae protein phosphorylation site database: version 2.0 update

door Sadowski, Ivan, Breitkreutz, Bobby-Joe, Stark, Chris, Su, Ting-Cheng, Dahabieh, Matthew, Raithatha, Sheetal, Bernhard, Wendy, Oughtred, Rose, Dolinski, Kara, Barreto, Kris, Tyers, Mike
Gepubliceerd in 2013

The BioC-BioGRID corpus: full text articles annotated for curation of protein–protein and genetic interactions

door Islamaj Doğan, Rezarta, Kim, Sun, Chatr-aryamontri, Andrew, Chang, Christie S., Oughtred, Rose, Rust, Jennifer, Wilbur, W. John, Comeau, Donald C., Dolinski, Kara, Tyers, Mike
Gepubliceerd in Database (Oxford) (2017)

A Computational Framework for Genome-wide Characterization of the Human Disease Landscape

door Lee, Young-suk, Krishnan, Arjun, Oughtred, Rose, Rust, Jennifer, Chang, Christie S., Ryu, Joseph, Kristensen, Vessela N., Dolinski, Kara, Theesfeld, Chandra L., Troyanskaya, Olga G.
Gepubliceerd in Cell Syst (2019)

The BioGRID Interaction Database: 2008 update

door Breitkreutz, Bobby-Joe, Stark, Chris, Reguly, Teresa, Boucher, Lorrie, Breitkreutz, Ashton, Livstone, Michael, Oughtred, Rose, Lackner, Daniel H., Bähler, Jürg, Wood, Valerie, Dolinski, Kara, Tyers, Mike
Gepubliceerd in 2008

The BioGRID interaction database: 2017 update

door Chatr-aryamontri, Andrew, Oughtred, Rose, Boucher, Lorrie, Rust, Jennifer, Chang, Christie, Kolas, Nadine K., O'Donnell, Lara, Oster, Sara, Theesfeld, Chandra, Sellam, Adnane, Stark, Chris, Breitkreutz, Bobby-Joe, Dolinski, Kara, Tyers, Mike
Gepubliceerd in Nucleic Acids Res (2017)

The BioGRID database: A comprehensive biomedical resource of curated protein, genetic, and chemical interactions

door Oughtred, Rose, Rust, Jennifer, Chang, Christie, Breitkreutz, Bobby‐Joe, Stark, Chris, Willems, Andrew, Boucher, Lorrie, Leung, Genie, Kolas, Nadine, Zhang, Frederick, Dolma, Sonam, Coulombe‐Huntington, Jasmin, Chatr‐aryamontri, Andrew, Dolinski, Kara, Tyers, Mike
Gepubliceerd in Protein Sci (2020)

The BioGRID Interaction Database: 2011 update

door Stark, Chris, Breitkreutz, Bobby-Joe, Chatr-aryamontri, Andrew, Boucher, Lorrie, Oughtred, Rose, Livstone, Michael S., Nixon, Julie, Van Auken, Kimberly, Wang, Xiaodong, Shi, Xiaoqi, Reguly, Teresa, Rust, Jennifer M., Winter, Andrew, Dolinski, Kara, Tyers, Mike
Gepubliceerd in 2011

Proteome-wide, Structure-Based Prediction of Protein-Protein Interactions/New Molecular Interactions Viewer

door Dong, Shaowei, Lau, Vincent, Song, Richard, Ierullo, Matthew, Esteban, Eddi, Wu, Yingzhou, Sivieng, Teeratham, Nahal, Hardeep, Gaudinier, Allison, Pasha, Asher, Oughtred, Rose, Dolinski, Kara, Tyers, Mike, Brady, Siobhan M., Grene, Ruth, Usadel, Björn, Provart, Nicholas J.
Gepubliceerd in Plant Physiol (2019)

The BioGRID interaction database: 2019 update

door Oughtred, Rose, Stark, Chris, Breitkreutz, Bobby-Joe, Rust, Jennifer, Boucher, Lorrie, Chang, Christie, Kolas, Nadine, O’Donnell, Lara, Leung, Genie, McAdam, Rochelle, Zhang, Frederick, Dolma, Sonam, Willems, Andrew, Coulombe-Huntington, Jasmin, Chatr-aryamontri, Andrew, Dolinski, Kara, Tyers, Mike
Gepubliceerd in Nucleic Acids Res (2019)

The BioGRID interaction database: 2013 update

door Chatr-aryamontri, Andrew, Breitkreutz, Bobby-Joe, Heinicke, Sven, Boucher, Lorrie, Winter, Andrew, Stark, Chris, Nixon, Julie, Ramage, Lindsay, Kolas, Nadine, O’Donnell, Lara, Reguly, Teresa, Breitkreutz, Ashton, Sellam, Adnane, Chen, Daici, Chang, Christie, Rust, Jennifer, Livstone, Michael, Oughtred, Rose, Dolinski, Kara, Tyers, Mike
Gepubliceerd in 2013

An extended set of yeast-based functional assays accurately identifies human disease mutations

door Sun, Song, Yang, Fan, Tan, Guihong, Costanzo, Michael, Oughtred, Rose, Hirschman, Jodi, Theesfeld, Chandra L., Bansal, Pritpal, Sahni, Nidhi, Yi, Song, Yu, Analyn, Tyagi, Tanya, Tie, Cathy, Hill, David E., Vidal, Marc, Andrews, Brenda J., Boone, Charles, Dolinski, Kara, Roth, Frederick P.
Gepubliceerd in Genome Res (2016)

Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae

door Reguly, Teresa, Breitkreutz, Ashton, Boucher, Lorrie, Breitkreutz, Bobby-Joe, Hon, Gary C, Myers, Chad L, Parsons, Ainslie, Friesen, Helena, Oughtred, Rose, Tong, Amy, Stark, Chris, Ho, Yuen, Botstein, David, Andrews, Brenda, Boone, Charles, Troyanskya, Olga G, Ideker, Trey, Dolinski, Kara, Batada, Nizar N, Tyers, Mike
Gepubliceerd in 2006

The BioGRID interaction database: 2015 update

door Chatr-aryamontri, Andrew, Breitkreutz, Bobby-Joe, Oughtred, Rose, Boucher, Lorrie, Heinicke, Sven, Chen, Daici, Stark, Chris, Breitkreutz, Ashton, Kolas, Nadine, O'Donnell, Lara, Reguly, Teresa, Nixon, Julie, Ramage, Lindsay, Winter, Andrew, Sellam, Adnane, Chang, Christie, Hirschman, Jodi, Theesfeld, Chandra, Rust, Jennifer, Livstone, Michael S., Dolinski, Kara, Tyers, Mike
Gepubliceerd in Nucleic Acids Res (2014)

Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD)

door Balakrishnan, Rama, Christie, Karen R., Costanzo, Maria C., Dolinski, Kara, Dwight, Selina S., Engel, Stacia R., Fisk, Dianna G., Hirschman, Jodi E., Hong, Eurie L., Nash, Robert, Oughtred, Rose, Skrzypek, Marek, Theesfeld, Chandra L., Binkley, Gail, Dong, Qing, Lane, Christopher, Sethuraman, Anand, Weng, Shuai, Botstein, David, Cherry, J. Michael
Gepubliceerd in 2005

BioGRID: A Tool for Studying Biological Interactions in Yeast

door Oughtred, Rose, Chatr-aryamontri, Andrew, Breitkreutz, Bobby-Joe, Chang, Christie S., Rust, Jennifer M., Theesfeld, Chandra L., Heinicke, Sven, Breitkreutz, Ashton, Chen, Daici, Hirschman, Jodi, Kolas, Nadine, Livstone, Michael S., Nixon, Julie, O’Donnell, Lara, Ramage, Lindsay, Winter, Andrew, Reguly, Teresa, Sellam, Adnane, Stark, Chris, Boucher, Lorrie, Dolinski, Kara, Tyers, Mike
Gepubliceerd in Cold Spring Harb Protoc (2016)

Use of the BioGRID Database for Analysis of Yeast Protein and Genetic Interactions

door Oughtred, Rose, Chatr-aryamontri, Andrew, Breitkreutz, Bobby-Joe, Chang, Christie S., Rust, Jennifer M., Theesfeld, Chandra L., Heinicke, Sven, Breitkreutz, Ashton, Chen, Daici, Hirschman, Jodi, Kolas, Nadine, Livstone, Michael S., Nixon, Julie, O’Donnell, Lara, Ramage, Lindsay, Winter, Andrew, Reguly, Teresa, Sellam, Adnane, Stark, Chris, Boucher, Lorrie, Dolinski, Kara, Tyers, Mike
Gepubliceerd in Cold Spring Harb Protoc (2016)