Fate by RNA methylation: m(6)A steers stem cell pluripotency

by Zhao, Boxuan Simen, He, Chuan
Published in Genome Biol (2015)

Pseudouridine in a new era of RNA modifications

by Zhao, Boxuan Simen, He, Chuan
Published in Cell Res (2015)

A highly sensitive and genetically encoded fluorescent reporter for ratiometric monitoring of quinones in living cells

by Ji, Quanjiang, Zhao, Boxuan Simen, He, Chuan
Published 2013

Nucleic acid modifications in regulation of gene expression

by Chen, Kai, Zhao, Boxuan Simen, He, Chuan
Published in Cell Chem Biol (2016)

TET Family Proteins: Oxidation Activity, Interacting Molecules, and Functions in Diseases

by Lu, Xingyu, Zhao, Boxuan Simen, He, Chuan
Published in Chem Rev (2015)

Post-transcriptional gene regulation by mRNA modifications

by Zhao, Boxuan Simen, Roundtree, Ian A., He, Chuan
Published in Nat Rev Mol Cell Biol (2016)

Our views of dynamic N(6)-methyladenosine RNA methylation

by Zhao, Boxuan Simen, Nachtergaele, Sigrid, Roundtree, Ian A., He, Chuan
Published in RNA (2018)

Quantifying mammalian genomic DNA hydroxymethylcytosine content using solid-state nanopores

by Zahid, Osama K., Zhao, Boxuan Simen, He, Chuan, Hall, Adam R.
Published in Sci Rep (2016)

N(6)-methyladenosine of HIV-1 RNA regulates viral infection and HIV-1 Gag protein expression

by Tirumuru, Nagaraja, Zhao, Boxuan Simen, Lu, Wuxun, Lu, Zhike, He, Chuan, Wu, Li
Published in eLife (2016)

Correction: N(6)-methyladenosine of HIV-1 RNA regulates viral infection and HIV-1 Gag protein expression

by Tirumuru, Nagaraja, Zhao, Boxuan Simen, Lu, Wuxun, Lu, Zhike, He, Chuan, Wu, Li
Published in eLife (2017)

Dynamics of Human and Viral RNA Methylation during ZIKA Virus Infection

by Lichinchi, Gianluigi, Zhao, Boxuan Simen, Wu, Yinga, Lu, Zhike, Qin, Yue, He, Chuan, Rana, Tariq M.
Published in Cell Host Microbe (2016)

RNA–protein interaction mapping via MS2- or Cas13-based APEX targeting

by Han, Shuo, Zhao, Boxuan Simen, Myers, Samuel A., Carr, Steven A., He, Chuan, Ting, Alice Y.
Published in Proc Natl Acad Sci U S A (2020)

Base-resolution maps of 5-formylcytosine and 5-carboxylcytosine reveal genome-wide DNA demethylation dynamics

by Lu, Xingyu, Han, Dali, Zhao, Boxuan Simen, Song, Chun-Xiao, Zhang, Li-Sheng, Doré, Louis C, He, Chuan
Published in Cell Res (2015)

m(6)A-dependent maternal mRNA clearance facilitates zebrafish maternal-to-zygotic transition

by Zhao, Boxuan Simen, Wang, Xiao, Beadell, Alana V., Lu, Zhike, Shi, Hailing, Kuuspalu, Adam, Ho, Robert K., He, Chuan
Published in Nature (2017)

N(6)-methyladenosine Modulates Messenger RNA Translation Efficiency

by Wang, Xiao, Zhao, Boxuan Simen, Roundtree, Ian A., Lu, Zhike, Han, Dali, Ma, Honghui, Weng, Xiaocheng, Chen, Kai, Shi, Hailing, He, Chuan
Published in Cell (2015)

DNA 5-Methylcytosine-Specific Amplification and Sequencing

by Liu, Chang, Cui, Xiaolong, Zhao, Boxuan Simen, Narkhede, Pradnya, Gao, Yawei, Liu, Jun, Dou, Xiaoyang, Dai, Qing, Zhang, Li-Sheng, He, Chuan
Published in J Am Chem Soc (2020)

The m(6)A Demethylase ALKBH5 Maintains Tumorigenicity of Glioblastoma Stem-Like Cells by Sustaining FOXM1 Expression and Cell Proliferation Program

by Zhang, Sicong, Zhao, Boxuan Simen, Zhou, Aidong, Lin, Kangyu, Zheng, Shaoping, Lu, Zhike, Chen, Yaohui, Sulman, Erik P., Xie, Keping, Bögler, Oliver, Majumder, Sadhan, He, Chuan, Huang, Suyun
Published in Cancer Cell (2017)

Long genes linked to autism spectrum disorders harbor broad enhancer-like chromatin domains

by Zhao, Ying-Tao, Kwon, Deborah Y., Johnson, Brian S., Fasolino, Maria, Lamonica, Janine M., Kim, Yoon Jung, Zhao, Boxuan Simen, He, Chuan, Vahedi, Golnaz, Kim, Tae Hoon, Zhou, Zhaolan
Published in Genome Res (2018)

N(6)-methyladenosine modification enables viral RNA to escape recognition by RNA sensor RIG-I

by Lu, Mijia, Zhang, Zijie, Xue, Miaoge, Zhao, Boxuan Simen, Harder, Olivia, Li, Anzhong, Liang, Xueya, Gao, Thomas Z., Xu, Yunsheng, Zhou, Jiyong, Feng, Zongdi, Niewiesk, Stefan, Peeples, Mark E., He, Chuan, Li, Jianrong
Published in Nat Microbiol (2020)

Viral N(6)-methyladenosine upregulates replication and pathogenesis of human respiratory syncytial virus

by Xue, Miaoge, Zhao, Boxuan Simen, Zhang, Zijie, Lu, Mijia, Harder, Olivia, Chen, Phylip, Lu, Zhike, Li, Anzhong, Ma, Yuanmei, Xu, Yunsheng, Liang, Xueya, Zhou, Jiyong, Niewiesk, Stefan, Peeples, Mark E., He, Chuan, Li, Jianrong
Published in Nat Commun (2019)