SBML2L(a)T(E)X: Conversion of SBML files into human-readable reports

Por Dräger, Andreas, Planatscher, Hannes, Motsou Wouamba, Dieudonné, Schröder, Adrian, Hucka, Michael, Endler, Lukas, Golebiewski, Martin, Müller, Wolfgang, Zell, Andreas
Publicado em 2009

Towards standardization guidelines for in silico approaches in personalized medicine

Por Brunak, Søren, Bjerre Collin, Catherine, Eva Ó Cathaoir, Katharina, Golebiewski, Martin, Kirschner, Marc, Kockum, Ingrid, Moser, Heike, Waltemath, Dagmar
Publicado no J Integr Bioinform (2020)

Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2016

Por Schreiber, Falk, Bader, Gary D., Gleeson, Padraig, Golebiewski, Martin, Hucka, Michael, Le Novére, Nicolas, Myers, Chris, Nickerson, David, Sommer, Björn, Walthemath, Dagmar
Publicado no J Integr Bioinform (2016)

Specifications of Standards in Systems and Synthetic Biology

Por Schreiber, Falk, Bader, Gary D., Golebiewski, Martin, Hucka, Michael, Kormeier, Benjamin, Le Novère, Nicolas, Myers, Chris, Nickerson, David, Sommer, Björn, Waltemath, Dagmar, Weise, Stephan
Publicado no J Integr Bioinform (2015)

Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2019

Por Schreiber, Falk, Sommer, Björn, Bader, Gary D., Gleeson, Padraig, Golebiewski, Martin, Hucka, Michael, Keating, Sarah M., König, Matthias, Myers, Chris, Nickerson, David, Waltemath, Dagmar
Publicado no J Integr Bioinform (2019)

Specifications of standards in systems and synthetic biology: status and developments in 2020

Por Schreiber, Falk, Sommer, Björn, Czauderna, Tobias, Golebiewski, Martin, Gorochowski, Thomas E., Hucka, Michael, Keating, Sarah M., König, Matthias, Myers, Chris, Nickerson, David, Waltemath, Dagmar
Publicado no J Integr Bioinform (2020)

The histone deacetylase inhibitor valproic acid selectively induces proteasomal degradation of HDAC2

Por Krämer, Oliver H., Zhu, Ping, Ostendorff, Heather P., Golebiewski, Martin, Tiefenbach, Jens, Peters, Marvin A., Brill, Boris, Groner, Bernd, Bach, Ingolf, Heinzel, Thorsten, Göttlicher, Martin
Publicado em 2003

Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2017

Por Schreiber, Falk, Bader, Gary D., Gleeson, Padraig, Golebiewski, Martin, Hucka, Michael, Keating, Sarah M., Novère, Nicolas Le, Myers, Chris, Nickerson, David, Sommer, Björn, Waltemath, Dagmar
Publicado no J Integr Bioinform (2018)

The Human Physiome: how standards, software and innovative service infrastructures are providing the building blocks to make it achievable

Por Nickerson, David, Atalag, Koray, de Bono, Bernard, Geiger, Jörg, Goble, Carole, Hollmann, Susanne, Lonien, Joachim, Müller, Wolfgang, Regierer, Babette, Stanford, Natalie J., Golebiewski, Martin, Hunter, Peter
Publicado no Interface Focus (2016)

SEEK: a systems biology data and model management platform

Por Wolstencroft, Katherine, Owen, Stuart, Krebs, Olga, Nguyen, Quyen, Stanford, Natalie J, Golebiewski, Martin, Weidemann, Andreas, Bittkowski, Meik, An, Lihua, Shockley, David, Snoep, Jacky L., Mueller, Wolfgang, Goble, Carole
Publicado no BMC Syst Biol (2015)

Promoting Coordinated Development of Community-Based Information Standards for Modeling in Biology: The COMBINE Initiative

Por Hucka, Michael, Nickerson, David P., Bader, Gary D., Bergmann, Frank T., Cooper, Jonathan, Demir, Emek, Garny, Alan, Golebiewski, Martin, Myers, Chris J., Schreiber, Falk, Waltemath, Dagmar, Le Novère, Nicolas
Publicado no Front Bioeng Biotechnol (2015)

The evolution of standards and data management practices in systems biology

Por Stanford, Natalie J, Wolstencroft, Katherine, Golebiewski, Martin, Kania, Renate, Juty, Nick, Tomlinson, Christopher, Owen, Stuart, Butcher, Sarah, Hermjakob, Henning, Le Novère, Nicolas, Mueller, Wolfgang, Snoep, Jacky, Goble, Carole
Publicado no Mol Syst Biol (2015)

SABIO-RK—database for biochemical reaction kinetics

Por Wittig, Ulrike, Kania, Renate, Golebiewski, Martin, Rey, Maja, Shi, Lei, Jong, Lenneke, Algaa, Enkhjargal, Weidemann, Andreas, Sauer-Danzwith, Heidrun, Mir, Saqib, Krebs, Olga, Bittkowski, Meik, Wetsch, Elina, Rojas, Isabel, Müller, Wolfgang
Publicado em 2012

FAIRDOMHub: a repository and collaboration environment for sharing systems biology research

Por Wolstencroft, Katherine, Krebs, Olga, Snoep, Jacky L., Stanford, Natalie J., Bacall, Finn, Golebiewski, Martin, Kuzyakiv, Rostyk, Nguyen, Quyen, Owen, Stuart, Soiland-Reyes, Stian, Straszewski, Jakub, van Niekerk, David D., Williams, Alan R., Malmström, Lars, Rinn, Bernd, Müller, Wolfgang, Goble, Carole
Publicado no Nucleic Acids Res (2017)

COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project

Por Bergmann, Frank T, Adams, Richard, Moodie, Stuart, Cooper, Jonathan, Glont, Mihai, Golebiewski, Martin, Hucka, Michael, Laibe, Camille, Miller, Andrew K, Nickerson, David P, Olivier, Brett G, Rodriguez, Nicolas, Sauro, Herbert M, Scharm, Martin, Soiland-Reyes, Stian, Waltemath, Dagmar, Yvon, Florent, Le Novère, Nicolas
Publicado no BMC Bioinformatics (2014)

The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE)

Por Waltemath, Dagmar, Golebiewski, Martin, Blinov, Michael L, Gleeson, Padraig, Hermjakob, Henning, Hucka, Michael, Inau, Esther Thea, Keating, Sarah M, König, Matthias, Krebs, Olga, Malik-Sheriff, Rahuman S, Nickerson, David, Oberortner, Ernst, Sauro, Herbert M, Schreiber, Falk, Smith, Lucian, Stefan, Melanie I, Wittig, Ulrike, Myers, Chris J
Publicado no J Integr Bioinform (2020)

Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)

Por Waltemath, Dagmar, Bergmann, Frank T., Chaouiya, Claudine, Czauderna, Tobias, Gleeson, Padraig, Goble, Carole, Golebiewski, Martin, Hucka, Michael, Juty, Nick, Krebs, Olga, Le Novère, Nicolas, Mi, Huaiyu, Moraru, Ion I., Myers, Chris J., Nickerson, David, Olivier, Brett G., Rodriguez, Nicolas, Schreiber, Falk, Smith, Lucian, Zhang, Fengkai, Bonnet, Eric
Publicado em 2014

Correction to: Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)

Por Waltemath, Dagmar, Bergmann, Frank T., Chaouiya, Claudine, Czauderna, Tobias, Gleeson, Padraig, Goble, Carole, Golebiewski, Martin, Hucka, Michael, Juty, Nick, Krebs, Olga, Le Novère, Nicolas, Mi, Huaiyu, Moraru, Ion I., Myers, Chris J., Nickerson, David, Olivier, Brett G., Rodriguez, Nicolas, Schreiber, Falk, Smith, Lucian, Zhang, Fengkai, Bonnet, Eric
Publicado no Stand Genomic Sci (2018)

Controlled vocabularies and semantics in systems biology

Por Courtot, Mélanie, Juty, Nick, Knüpfer, Christian, Waltemath, Dagmar, Zhukova, Anna, Dräger, Andreas, Dumontier, Michel, Finney, Andrew, Golebiewski, Martin, Hastings, Janna, Hoops, Stefan, Keating, Sarah, Kell, Douglas B, Kerrien, Samuel, Lawson, James, Lister, Allyson, Lu, James, Machne, Rainer, Mendes, Pedro, Pocock, Matthew, Rodriguez, Nicolas, Villeger, Alice, Wilkinson, Darren J, Wimalaratne, Sarala, Laibe, Camille, Hucka, Michael, Le Novère, Nicolas
Publicado em 2011

Path2Models: large-scale generation of computational models from biochemical pathway maps

Por Büchel, Finja, Rodriguez, Nicolas, Swainston, Neil, Wrzodek, Clemens, Czauderna, Tobias, Keller, Roland, Mittag, Florian, Schubert, Michael, Glont, Mihai, Golebiewski, Martin, van Iersel, Martijn, Keating, Sarah, Rall, Matthias, Wybrow, Michael, Hermjakob, Henning, Hucka, Michael, Kell, Douglas B, Müller, Wolfgang, Mendes, Pedro, Zell, Andreas, Chaouiya, Claudine, Saez-Rodriguez, Julio, Schreiber, Falk, Laibe, Camille, Dräger, Andreas, Le Novère, Nicolas
Publicado no BMC Syst Biol (2013)