Loss of Gcn5 Acetyltransferase Activity Leads to Neural Tube Closure Defects and Exencephaly in Mouse Embryos

por Bu, Ping, Evrard, Yvonne A., Lozano, Guillermina, Dent, Sharon Y. R.
Publicado 2007

c-Myc Transformation Domain Recruits the Human STAGA Complex and Requires TRRAP and GCN5 Acetylase Activity for Transcription Activation(*)

por Liu, Xiaohui, Tesfai, Jerusalem, Evrard, Yvonne A., Dent, Sharon Y. R., Martinez, Ernest
Publicado 2003

Promise and Limits of the CellSearch® Platform for Evaluating Pharmacodynamics in Circulating Tumor Cells (CTC)

por Wang, Lihua, Balasubramanian, Priya, Chen, Alice, Kummar, Shivaani, Evrard, Yvonne A., Kinders, Robert
Publicado en Semin Oncol (2016)

Systematic Establishment of Robustness and Standards in Patient-Derived Xenograft Experiments and Analysis

por Evrard, Yvonne A., Srivastava, Anuj, Randjelovic, Jelena, Doroshow, James H., Dean, Dennis A., Morris, Jeffrey S., Chuang, Jeffrey H.
Publicado en Cancer Res (2020)

Gcn5 and SAGA Regulate Shelterin Protein Turnover and Telomere Maintenance

por Atanassov, Boyko S., Evrard, Yvonne A., Multani, Asha S., Zhang, Zhijing, Tora, László, Devys, Didier, Chang, Sandy, Dent, Sharon Y.R.
Publicado 2009

Enhanced Co-Expression Extrapolation (COXEN) Gene Selection Method for Building Anti-Cancer Drug Response Prediction Models

por Zhu, Yitan, Brettin, Thomas, Evrard, Yvonne A., Xia, Fangfang, Partin, Alexander, Shukla, Maulik, Yoo, Hyunseung, Doroshow, James H., Stevens, Rick L.
Publicado en Genes (Basel) (2020)

Ensemble transfer learning for the prediction of anti-cancer drug response

por Zhu, Yitan, Brettin, Thomas, Evrard, Yvonne A., Partin, Alexander, Xia, Fangfang, Shukla, Maulik, Yoo, Hyunseung, Doroshow, James H., Stevens, Rick L.
Publicado en Sci Rep (2020)

Converting tabular data into images for deep learning with convolutional neural networks

por Zhu, Yitan, Brettin, Thomas, Xia, Fangfang, Partin, Alexander, Shukla, Maulik, Yoo, Hyunseung, Evrard, Yvonne A., Doroshow, James H., Stevens, Rick L.
Publicado en Sci Rep (2021)

Publisher Correction: Converting tabular data into images for deep learning with convolutional neural networks

por Zhu, Yitan, Brettin, Thomas, Xia, Fangfang, Partin, Alexander, Shukla, Maulik, Yoo, Hyunseung, Evrard, Yvonne A., Doroshow, James H., Stevens, Rick L.
Publicado en Sci Rep (2021)

Learning curves for drug response prediction in cancer cell lines

por Partin, Alexander, Brettin, Thomas, Evrard, Yvonne A., Zhu, Yitan, Yoo, Hyunseung, Xia, Fangfang, Jiang, Songhao, Clyde, Austin, Shukla, Maulik, Fonstein, Michael, Doroshow, James H., Stevens, Rick L.
Publicado en BMC Bioinformatics (2021)

TPM, FPKM, or Normalized Counts? A Comparative Study of Quantification Measures for the Analysis of RNA-seq Data from the NCI Patient-Derived Models Repository

por Zhao, Yingdong, Li, Ming-Chung, Konaté, Mariam M., Chen, Li, Das, Biswajit, Karlovich, Chris, Williams, P. Mickey, Evrard, Yvonne A., Doroshow, James H., McShane, Lisa M.
Publicado en J Transl Med (2021)

Development of a Validated Immunofluorescence Assay for γH2AX as a Pharmacodynamic Marker of Topoisomerase I Inhibitor Activity

por Kinders, Robert J., Hollingshead, Melinda, Lawrence, Scott, Ji, Jiuping, Tabb, Brian, Bonner, William M., Pommier, Yves, Rubinstein, Larry, Evrard, Yvonne A., Parchment, Ralph E., Tomaszewski, Joseph, Doroshow, James H.
Publicado 2010

Monitoring Drug-Induced γH2AX as a Pharmacodynamic Biomarker in Individual Circulating Tumor Cells

por Wang, Lihua H., Pfister, Thomas D., Parchment, Ralph E., Kummar, Shivaani, Rubinstein, Larry, Evrard, Yvonne A., Gutierrez, Martin E., Murgo, Anthony J., Tomaszewski, Joseph E., Doroshow, James H., Kinders, Robert J.
Publicado 2010

Predicting tumor cell line response to drug pairs with deep learning

por Xia, Fangfang, Shukla, Maulik, Brettin, Thomas, Garcia-Cardona, Cristina, Cohn, Judith, Allen, Jonathan E., Maslov, Sergei, Holbeck, Susan L., Doroshow, James H., Evrard, Yvonne A., Stahlberg, Eric A., Stevens, Rick L.
Publicado en BMC Bioinformatics (2018)

AI Meets Exascale Computing: Advancing Cancer Research With Large-Scale High Performance Computing

por Bhattacharya, Tanmoy, Brettin, Thomas, Doroshow, James H., Evrard, Yvonne A., Greenspan, Emily J., Gryshuk, Amy L., Hoang, Thuc T., Lauzon, Carolyn B. Vea, Nissley, Dwight, Penberthy, Lynne, Stahlberg, Eric, Stevens, Rick, Streitz, Fred, Tourassi, Georgia, Xia, Fangfang, Zaki, George
Publicado en Front Oncol (2019)

Development and Validation of an Immunoassay for Quantification of Topoisomerase I in Solid Tumor Tissues

por Pfister, Thomas D., Hollingshead, Melinda, Kinders, Robert J., Zhang, Yiping, Evrard, Yvonne A., Ji, Jiuping, Khin, Sonny A., Borgel, Suzanne, Stotler, Howard, Carter, John, Divelbiss, Raymond, Kummar, Shivaani, Pommier, Yves, Parchment, Ralph E., Tomaszewski, Joseph E., Doroshow, James H.
Publicado 2012

Pharmacodynamic Response of the MET/HGF-Receptor to Small Molecule Tyrosine Kinase Inhibitors Examined with Validated, Fit-for-Clinic Immunoassays

por Srivastava, Apurva K, Hollingshead, Melinda G., Weiner, Jennifer, Navas, Tony, Evrard, Yvonne A., Khin, Sonny, Ji, Jiuping, Zhang, Yiping, Borgel, Suzanne, Pfister, Thomas D, Kinders, Robert J., Bottaro, Donald P, Linehan, W Marston, Tomaszewski, Joseph E, Doroshow, James H, Parchment, Ralph E
Publicado en Clin Cancer Res (2016)

PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models

por Meehan, Terrence F., Conte, Nathalie, Goldstein, Theodore C., Inghirami, Giorgio, Murakami, Mark A., Brabetz, Sebastian, Gu, Zhiping, Wiser, Jeffrey A., Dunn, Patrick, Begley, Dale A., Krupke, Debra M., Bertotti, Andrea, Bruna, Alejandra, Brush, Matthew, Byrne, Annette T., Caldas, Carlos, Christie, Amanda L., Clark, Dominic, Dowst, Heidi, Dry, Jonathan R., Doroshow, James H., Duchamp, Olivier, Evrard, Yvonne A., Ferretti, Stephane, Frese, Kristopher K., Goodwin, Neal C., Greenawalt, Danielle M., Haendel, Melissa A., Hermans, Els, Houghton, Peter J., Jonkers, Jos, Kemper, Kristel, Khor, Tin O., Lewis, Michael T., Lloyd, KC Kent, Mason, Jeremy C., Medico, Enzo, Neuhauser, Steven B., Olson, Jim M., Peeper, Daniel S., Rueda, Oscar M., Seong, Je Kyung, Trusolino, Livio, Vinolo, Emilie, Wechsler-Reya, Robert J., Weinstock, David M., Welm, Alana, Weroha, S. John, Amant, Frédéric, Pfister, Stefan M, Kool, Marcel, Parkinson, Helen, Butte, Atul J., Bult, Carol J.
Publicado en Cancer Res (2017)

Conservation of copy number profiles during engraftment and passaging of patient-derived cancer xenografts

por Woo, Xing Yi, Giordano, Jessica, Srivastava, Anuj, Zhao, Zi-Ming, Lloyd, Michael W., de Bruijn, Roebi, Suh, Yun-Suhk, Patidar, Rajesh, Chen, Li, Scherer, Sandra, Bailey, Matthew H., Yang, Chieh-Hsiang, Cortes-Sanchez, Emilio, Xi, Yuanxin, Wang, Jing, Wickramasinghe, Jayamanna, Kossenkov, Andrew V., Rebecca, Vito W., Sun, Hua, Mashl, R. Jay, Davies, Sherri R., Jeon, Ryan, Frech, Christian, Randjelovic, Jelena, Rosains, Jacqueline, Galimi, Francesco, Bertotti, Andrea, Lafferty, Adam, O’Farrell, Alice C., Modave, Elodie, Lambrechts, Diether, ter Brugge, Petra, Serra, Violeta, Marangoni, Elisabetta, El Botty, Rania, Kim, Hyunsoo, Kim, Jong-Il, Yang, Han-Kwang, Lee, Charles, Dean, Dennis A., Davis-Dusenbery, Brandi, Evrard, Yvonne A., Doroshow, James H., Welm, Alana L., Welm, Bryan E., Lewis, Michael T., Fang, Bingliang, Roth, Jack A., Meric-Bernstam, Funda, Herlyn, Meenhard, Davies, Michael A., Ding, Li, Li, Shunqiang, Govindan, Ramaswamy, Isella, Claudio, Moscow, Jeffrey A., Trusolino, Livio, Byrne, Annette T., Jonkers, Jos, Bult, Carol J., Medico, Enzo, Chuang, Jeffrey H.
Publicado en Nat Genet (2021)

Author Correction: Conservation of copy number profiles during engraftment and passaging of patient-derived cancer xenografts

por Woo, Xing Yi, Giordano, Jessica, Srivastava, Anuj, Zhao, Zi-Ming, Lloyd, Michael W., de Bruijn, Roebi, Suh, Yun-Suhk, Patidar, Rajesh, Chen, Li, Scherer, Sandra, Bailey, Matthew H., Yang, Chieh-Hsiang, Cortes-Sanchez, Emilio, Xi, Yuanxin, Wang, Jing, Wickramasinghe, Jayamanna, Kossenkov, Andrew V., Rebecca, Vito W., Sun, Hua, Mashl, R. Jay, Davies, Sherri R., Jeon, Ryan, Frech, Christian, Randjelovic, Jelena, Rosains, Jacqueline, Galimi, Francesco, Bertotti, Andrea, Lafferty, Adam, O’Farrell, Alice C., Modave, Elodie, Lambrechts, Diether, ter Brugge, Petra, Serra, Violeta, Marangoni, Elisabetta, El Botty, Rania, Kim, Hyunsoo, Kim, Jong-Il, Yang, Han-Kwang, Lee, Charles, Dean, Dennis A., Davis-Dusenbery, Brandi, Evrard, Yvonne A., Doroshow, James H., Welm, Alana L., Welm, Bryan E., Lewis, Michael T., Fang, Bingliang, Roth, Jack A., Meric-Bernstam, Funda, Herlyn, Meenhard, Davies, Michael A., Ding, Li, Li, Shunqiang, Govindan, Ramaswamy, Isella, Claudio, Moscow, Jeffrey A., Trusolino, Livio, Byrne, Annette T., Jonkers, Jos, Bult, Carol J., Medico, Enzo, Chuang, Jeffrey H.
Publicado en Nat Genet (2021)