Strategies for efficient numerical implementation of hybrid multi-scale agent-based models to describe biological systems

بواسطة Cilfone, Nicholas A., Kirschner, Denise E., Linderman, Jennifer J.
الحاوية / القاعدة Cell Mol Bioeng (2015)

Multi-Scale Modeling Predicts a Balance of Tumor Necrosis Factor-α and Interleukin-10 Controls the Granuloma Environment during Mycobacterium tuberculosis Infection

بواسطة Cilfone, Nicholas A., Perry, Cory R., Kirschner, Denise E., Linderman, Jennifer J.
منشور في 2013

A Multi-scale Approach to Designing Therapeutics for Tuberculosis

بواسطة Linderman, Jennifer J., Cilfone, Nicholas A., Pienaar, Elsje, Gong, Chang, Kirschner, Denise E.
الحاوية / القاعدة Integr Biol (Camb) (2015)

Macrophage Polarization Drives Granuloma Outcome during Mycobacterium tuberculosis Infection

بواسطة Marino, Simeone, Cilfone, Nicholas A., Mattila, Joshua T., Linderman, Jennifer J., Flynn, JoAnne L., Kirschner, Denise E.
الحاوية / القاعدة Infect Immun (2014)

Enhancing reproducibility of gene expression analysis with known protein functional relationships: The concept of well-associated protein

بواسطة Pradines, Joël R., Farutin, Victor, Cilfone, Nicholas A., Ghavami, Abouzar, Kurtagic, Elma, Guess, Jamey, Manning, Anthony M., Capila, Ishan
الحاوية / القاعدة PLoS Comput Biol (2020)

Computational Modeling Predicts Interleukin-10 Control of Lesion Sterilization By Balancing Early Host-Immunity-Mediated Antimicrobial Responses With Caseation During Mycobacterium...

بواسطة Cilfone, Nicholas A., Ford, Christopher B., Marino, Simeone, Mattila, Joshua T., Gideon, Hannah P., Flynn, JoAnne L., Kirschner, Denise E., Linderman, Jennifer J.
الحاوية / القاعدة J Immunol (2014)

A computational tool integrating host immunity with antibiotic dynamics to study tuberculosis treatment

بواسطة Pienaar, Elsje, Cilfone, Nicholas A., Lin, Philana Ling, Dartois, Véronique, Mattila, Joshua T., Butler, Russ, Flynn, JoAnne L., Kirschner, Denise E., Linderman, Jennifer J.
الحاوية / القاعدة J Theor Biol (2014)

Endothelial ERK1/2 signaling maintains integrity of the quiescent endothelium

بواسطة Ricard, Nicolas, Scott, Rizaldy P., Booth, Carmen J., Velazquez, Heino, Cilfone, Nicholas A., Baylon, Javier L., Gulcher, Jeffrey R., Quaggin, Susan E., Chittenden, Thomas W., Simons, Michael
الحاوية / القاعدة J Exp Med (2019)

Dynamic balance of pro- and anti-inflammatory signals controls disease and limits pathology

بواسطة Cicchese, Joseph M., Evans, Stephanie, Hult, Caitlin, Joslyn, Louis R., Wessler, Timothy, Millar, Jess A., Marino, Simeone, Cilfone, Nicholas A., Mattila, Joshua T., Linderman, Jennifer J., Kirschner, Denise E.
الحاوية / القاعدة Immunol Rev (2018)

M281, an Anti‐FcRn Antibody: Pharmacodynamics, Pharmacokinetics, and Safety Across the Full Range of IgG Reduction in a First‐in‐Human Study

بواسطة Ling, Leona E., Hillson, Jan L., Tiessen, Renger G., Bosje, Tjerk, van Iersel, Mattheus Paulus, Nix, Darrell J., Markowitz, Lynn, Cilfone, Nicholas A., Duffner, Jay, Streisand, James B., Manning, Anthony M., Arroyo, Santiago
الحاوية / القاعدة Clin Pharmacol Ther (2018)

Chronic mTOR activation induces a degradative smooth muscle cell phenotype

بواسطة Li, Guangxin, Wang, Mo, Caulk, Alexander W., Cilfone, Nicholas A., Gujja, Sharvari, Qin, Lingfeng, Chen, Pei-Yu, Chen, Zehua, Yousef, Sameh, Jiao, Yang, He, Changshun, Jiang, Bo, Korneva, Arina, Bersi, Matthew R., Wang, Guilin, Liu, Xinran, Mehta, Sameet, Geirsson, Arnar, Gulcher, Jeffrey R., Chittenden, Thomas W., Simons, Michael, Humphrey, Jay D., Tellides, George
الحاوية / القاعدة J Clin Invest (2020)

Molecular profiling of rheumatoid arthritis patients reveals an association between innate and adaptive cell populations and response to anti-tumor necrosis factor

بواسطة Farutin, Victor, Prod’homme, Thomas, McConnell, Kevin, Washburn, Nathaniel, Halvey, Patrick, Etzel, Carol J., Guess, Jamey, Duffner, Jay, Getchell, Kristen, Meccariello, Robin, Gutierrez, Bryan, Honan, Christopher, Zhao, Ganlin, Cilfone, Nicholas A., Gunay, Nur Sibel, Hillson, Jan L., DeLuca, David S., Saunders, Katherine C., Pappas, Dimitrios A., Greenberg, Jeffrey D., Kremer, Joel M., Manning, Anthony M., Ling, Leona E., Capila, Ishan
الحاوية / القاعدة Arthritis Res Ther (2019)

Endothelial TGF-β signalling drives vascular inflammation and atherosclerosis

بواسطة Chen, Pei-Yu, Qin, Lingfeng, Li, Guangxin, Wang, Zheng, Dahlman, James E., Malagon-Lopez, Jose, Gujja, Sharvari, Cilfone, Nicholas A., Kauffman, Kevin J., Sun, Lele, Sun, Hongye, Zhang, Xinbo, Aryal, Binod, Canfran-Duque, Alberto, Liu, Rebecca, Kusters, Pascal, Sehgal, Alfica, Jiao, Yang, Anderson, Daniel G., Gulcher, Jeffrey, Fernandez-Hernando, Carlos, Lutgens, Esther, Schwartz, Martin A., Pober, Jordan S., Chittenden, Thomas W., Tellides, George, Simons, Michael
الحاوية / القاعدة Nat Metab (2019)