Plant noncoding RNA gene discovery by “single-genome comparative genomics”

Por Chen, Chong-Jian, Zhou, Hui, Chen, Yue-Qin, Qu, Liang-Hu, Gautheret, Daniel
Publicado em 2011

Genomewide Analysis of Box C/D and Box H/ACA snoRNAs in Chlamydomonas reinhardtii Reveals an Extensive Organization Into Intronic Gene Clusters

Por Chen, Chun-Long, Chen, Chong-Jian, Vallon, Olivier, Huang, Zhan-Peng, Zhou, Hui, Qu, Liang-Hu
Publicado em 2008

HiTC: exploration of high-throughput ‘C’ experiments

Por Servant, Nicolas, Lajoie, Bryan R., Nora, Elphège P., Giorgetti, Luca, Chen, Chong-Jian, Heard, Edith, Dekker, Job, Barillot, Emmanuel
Publicado em 2012

RNAi-Dependent and Independent Control of LINE1 Accumulation and Mobility in Mouse Embryonic Stem Cells

Por Ciaudo, Constance, Jay, Florence, Okamoto, Ikuhiro, Chen, Chong-Jian, Sarazin, Alexis, Servant, Nicolas, Barillot, Emmanuel, Heard, Edith, Voinnet, Olivier
Publicado em 2013

Correction: RNAi-Dependent and Independent Control of LINE1 Accumulation and Mobility in Mouse Embryonic Stem Cells

Por Ciaudo, Constance, Jay, Florence, Okamoto, Ikuhiro, Chen, Chong-Jian, Sarazin, Alexis, Servant, Nicolas, Barillot, Emmanuel, Heard, Edith, Voinnet, Olivier
Publicado no PLoS Genet (2015)

Retraction: RNAi-Dependent and Independent Control of LINE1 Accumulation and Mobility in Mouse Embryonic Stem Cells

Por Ciaudo, Constance, Jay, Florence, Okamoto, Ikuhiro, Chen, Chong-Jian, Sarazin, Alexis, Servant, Nicolas, Barillot, Emmanuel, Heard, Edith, Voinnet, Olivier
Publicado no PLoS Genet (2015)

HiC-Pro: an optimized and flexible pipeline for Hi-C data processing

Por Servant, Nicolas, Varoquaux, Nelle, Lajoie, Bryan R., Viara, Eric, Chen, Chong-Jian, Vert, Jean-Philippe, Heard, Edith, Dekker, Job, Barillot, Emmanuel
Publicado no Genome Biol (2015)

Structural organization of the inactive X chromosome in the mouse

Por Giorgetti, Luca, Lajoie, Bryan R., Carter, Ava C., Attia, Mikael, Zhan, Ye, Xu, Jin, Chen, Chong Jian, Kaplan, Noam, Chang, Howard Y., Heard, Edith, Dekker, Job
Publicado no Nature (2016)

Maternal LSD1/KDM1A is an essential regulator of chromatin and transcription landscapes during zygotic genome activation

Por Ancelin, Katia, Syx, Laurène, Borensztein, Maud, Ranisavljevic, Noémie, Vassilev, Ivaylo, Briseño-Roa, Luis, Liu, Tao, Metzger, Eric, Servant, Nicolas, Barillot, Emmanuel, Chen, Chong-Jian, Schüle, Roland, Heard, Edith
Publicado no eLife (2016)

Xist-dependent imprinted X inactivation and the early developmental consequences of its failure

Por Borensztein, Maud, Syx, Laurène, Ancelin, Katia, Diabangouaya, Patricia, Picard, Christel, Liu, Tao, Liang, Jun-Bin, Vassilev, Ivaylo, Galupa, Rafael, Servant, Nicolas, Barillot, Emmanuel, Surani, Azim, Chen, Chong-Jian, Heard, Edith
Publicado no Nat Struct Mol Biol (2017)

Contribution of epigenetic landscapes and transcription factors to X-chromosome reactivation in the inner cell mass

Por Borensztein, Maud, Okamoto, Ikuhiro, Syx, Laurène, Guilbaud, Guillaume, Picard, Christel, Ancelin, Katia, Galupa, Rafael, Diabangouaya, Patricia, Servant, Nicolas, Barillot, Emmanuel, Surani, Azim, Saitou, Mitinori, Chen, Chong-Jian, Anastassiadis, Konstantinos, Heard, Edith
Publicado no Nat Commun (2017)

Statistical Approach to Decreasing the Error Rate of Noninvasive Prenatal Aneuploid Detection caused by Maternal Copy Number Variation

Por Zhang, Han, Zhao, Yang-Yu, Song, Jing, Zhu, Qi-Ying, Yang, Hua, Zheng, Mei-Ling, Xuan, Zhao-Ling, Wei, Yuan, Chen, Yang, Yuan, Peng-Bo, Yu, Yang, Li, Da-Wei, Liang, Jun-Bin, Fan, Ling, Chen, Chong-Jian, Qiao, Jie
Publicado no Sci Rep (2015)

The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions

Por Merchant, Sabeeha S., Prochnik, Simon E., Vallon, Olivier, Harris, Elizabeth H., Karpowicz, Steven J., Witman, George B., Terry, Astrid, Salamov, Asaf, Fritz-Laylin, Lillian K., Maréchal-Drouard, Laurence, Marshall, Wallace F., Qu, Liang-Hu, Nelson, David R., Sanderfoot, Anton A., Spalding, Martin H., Kapitonov, Vladimir V., Ren, Qinghu, Ferris, Patrick, Lindquist, Erika, Shapiro, Harris, Lucas, Susan M., Grimwood, Jane, Schmutz, Jeremy, Cardol, Pierre, Cerutti, Heriberto, Chanfreau, Guillaume, Chen, Chun-Long, Cognat, Valérie, Croft, Martin T., Dent, Rachel, Dutcher, Susan, Fernández, Emilio, Ferris, Patrick, Fukuzawa, Hideya, González-Ballester, David, González-Halphen, Diego, Hallmann, Armin, Hanikenne, Marc, Hippler, Michael, Inwood, William, Jabbari, Kamel, Kalanon, Ming, Kuras, Richard, Lefebvre, Paul A., Lemaire, Stéphane D., Lobanov, Alexey V., Lohr, Martin, Manuell, Andrea, Meier, Iris, Mets, Laurens, Mittag, Maria, Mittelmeier, Telsa, Moroney, James V., Moseley, Jeffrey, Napoli, Carolyn, Nedelcu, Aurora M., Niyogi, Krishna, Novoselov, Sergey V., Paulsen, Ian T., Pazour, Greg, Purton, Saul, Ral, Jean-Philippe, Riaño-Pachón, Diego Mauricio, Riekhof, Wayne, Rymarquis, Linda, Schroda, Michael, Stern, David, Umen, James, Willows, Robert, Wilson, Nedra, Zimmer, Sara Lana, Allmer, Jens, Balk, Janneke, Bisova, Katerina, Chen, Chong-Jian, Elias, Marek, Gendler, Karla, Hauser, Charles, Lamb, Mary Rose, Ledford, Heidi, Long, Joanne C., Minagawa, Jun, Page, M. Dudley, Pan, Junmin, Pootakham, Wirulda, Roje, Sanja, Rose, Annkatrin, Stahlberg, Eric, Terauchi, Aimee M., Yang, Pinfen, Ball, Steven, Bowler, Chris, Dieckmann, Carol L., Gladyshev, Vadim N., Green, Pamela, Jorgensen, Richard, Mayfield, Stephen, Mueller-Roeber, Bernd, Rajamani, Sathish, Sayre, Richard T., Brokstein, Peter, Dubchak, Inna, Goodstein, David, Hornick, Leila, Huang, Y. Wayne, Jhaveri, Jinal, Luo, Yigong, Martínez, Diego, Ngau, Wing Chi Abby, Otillar, Bobby, Poliakov, Alexander, Porter, Aaron, Szajkowski, Lukasz, Werner, Gregory, Zhou, Kemin, Grigoriev, Igor V., Rokhsar, Daniel S., Grossman, Arthur R.
Publicado em 2007