Generation of random mutant libraries with multiple primers in a single reaction

Bằng Lu, Xiaozhi, Hora, Bhavna, Cai, Fangping, Gao, Feng
Được phát hành 2010

Transmission of Multiple HIV-1 Subtype C Transmitted/founder Viruses into the Same Recipients Was not Determined by Modest Phenotypic Differences

Bằng Song, Hongshuo, Hora, Bhavna, Giorgi, Elena E., Kumar, Amit, Cai, Fangping, Bhattacharya, Tanmoy, Perelson, Alan S., Gao, Feng
Xuất bản năm Sci Rep (2016)

Simultaneous Detection of Major Drug Resistance Mutations of HIV-1 Subtype B Viruses from Dried Blood Spot Specimens by Multiplex Allele-Specific Assay

Bằng Zhang, Guoqing, Cai, Fangping, de Rivera, Ivette Lorenzana, Zhou, Zhiyong, Zhang, Jing, Nkengasong, John, Gao, Feng, Yang, Chunfu
Xuất bản năm J Clin Microbiol (2015)

Evolution of Drug-Resistant Viral Populations during Interruption of Antiretroviral Therapy

Bằng Wang, Dongning, Hicks, Charles B., Goswami, Neela D., Tafoya, Emi, Ribeiro, Ruy M., Cai, Fangping, Perelson, Alan S., Gao, Feng
Được phát hành 2011

Analysis of Low-Frequency Mutations Associated with Drug Resistance to Raltegravir before Antiretroviral Treatment

Bằng Liu, Jia, Miller, Michael D., Danovich, Robert M., Vandergrift, Nathan, Cai, Fangping, Hicks, Charles B., Hazuda, Daria J., Gao, Feng
Được phát hành 2011

Clonal amplification and maternal-infant transmission of nevirapine-resistant HIV-1 variants in breast milk following single-dose nevirapine prophylaxis

Bằng Permar, Sallie R, Salazar, Maria G, Gao, Feng, Cai, Fangping, Learn, Gerald H, Kalilani, Linda, Hahn, Beatrice H, Shaw, George M, Salazar-Gonzalez, Jesus F
Được phát hành 2013

Accumulated mutations by 6 months of infection collectively render transmitted/founder HIV-1 significantly less fit

Bằng Wang, Chu, Liu, Donglai, Zuo, Tao, Hora, Bhavna, Cai, Fangping, Ding, Haitao, Kappes, John, Ochsenbauer, Christina, Kong, Wei, Yu, Xianghui, Bhattacharya, Tanmoy, Perelson, Alan S, Gao, Feng
Xuất bản năm J Infect (2019)

Recombination-mediated escape from primary CD8+ T cells in acute HIV-1 infection

Bằng Ritchie, Adam John, Cai, Fangping, Smith, Nicola MG, Chen, Sheri, Song, Hongshuo, Brackenridge, Simon, Abdool Karim, Salim S, Korber, Bette T, McMichael, Andrew J, Gao, Feng, Goonetilleke, Nilu
Được phát hành 2014

Comprehensive Characterization of the Transmitted/founder env Genes from a Single MSM Cohort in China

Bằng Chen, Yue, Li, Ning, Zhang, Tong, Huang, Xiaojie, Cai, Fangping, Vandergrift, Nathan, Xin, Ruolei, Meng, Zhefeng, Zhang, Xiaoyan, Jiang, Chunlai, Xu, Xiaoning, Montefiori, David C, Gao, Feng, Wu, Hao
Xuất bản năm J Acquir Immune Defic Syndr (2015)

Streamlined Subpopulation, Subtype, and Recombination Analysis of HIV-1 Half-Genome Sequences Generated by High-Throughput Sequencing

Bằng Hora, Bhavna, Gulzar, Naila, Chen, Yue, Karagiannis, Konstantinos, Cai, Fangping, Su, Chang, Smith, Krista, Simonyan, Vahan, Shah, Sharaf Ali, Ahmed, Manzoor, Sanchez, Ana M., Stone, Mars, Cohen, Myron S., Denny, Thomas N., Mazumder, Raja, Gao, Feng
Xuất bản năm mSphere (2020)

HIV Resistance and Prevention of Mother-to-Child Transmission Regimen in HIV-Infected Infants in Northern Tanzania

Bằng Dow, Dorothy E., Schimana, Werner, Nyombi, Balthazar M., Mmbaga, Blandina T., Shayo, Aisa M., Bartlett, John A., Massambu, Charles G., Kifaro, Emmanuel G., Turner, Elizabeth L., DeMarco, Todd, Cai, Fangping, Cunningham, Coleen K., Buchanan, Ann M.
Xuất bản năm AIDS Res Hum Retroviruses (2017)

Simultaneous Detection of Major Drug Resistance Mutations in the Protease and Reverse Transcriptase Genes for HIV-1 Subtype C by Use of a Multiplex Allele-Specific Assay

Bằng Zhang, Guoqing, Cai, Fangping, Zhou, Zhiyong, DeVos, Joshua, Wagar, Nick, Diallo, Karidia, Zulu, Isaac, Wadonda-Kabondo, Nellie, Stringer, Jeffrey S. A., Weidle, Paul J., Ndongmo, Clement B., Sikazwe, Izukanji, Sarr, Abdoulaye, Kagoli, Matthew, Nkengasong, John, Gao, Feng, Yang, Chunfu
Được phát hành 2013

Cooperation between somatic mutation and germline-encoded residues enables antibody recognition of HIV-1 envelope glycans

Bằng Wu, Nelson R., Nicely, Nathan I., Lee, Esther M., Reed, Rachel K., Watts, Brian E., Cai, Fangping, Walkowicz, William E., Aussedat, Baptiste, Jones, Julia A., Eaton, Amanda, Trama, Ashley M., Alam, S. Munir, Montefiori, David C., Haynes, Barton F., Saunders, Kevin O.
Xuất bản năm PLoS Pathog (2019)

Impact of immune escape mutations on HIV-1 fitness in the context of the cognate transmitted/founder genome

Bằng Song, Hongshuo, Pavlicek, Jeffrey W, Cai, Fangping, Bhattacharya, Tanmoy, Li, Hui, Iyer, Shilpa S, Bar, Katharine J, Decker, Julie M, Goonetilleke, Nilu, Liu, Michael KP, Berg, Anna, Hora, Bhavna, Drinker, Mark S, Eudailey, Josh, Pickeral, Joy, Moody, M Anthony, Ferrari, Guido, McMichael, Andrew, Perelson, Alan S, Shaw, George M, Hahn, Beatrice H, Haynes, Barton F, Gao, Feng
Được phát hành 2012

Postnatally-transmitted HIV-1 Envelope variants have similar neutralization-sensitivity and function to that of nontransmitted breast milk variants

Bằng Fouda, Genevieve G, Mahlokozera, Tatenda, Salazar-Gonzalez, Jesus F, Salazar, Maria G, Learn, Gerald, Kumar, Surender B, Dennison, S Moses, Russell, Elizabeth, Rizzolo, Katherine, Jaeger, Frederick, Cai, Fangping, Vandergrift, Nathan A, Gao, Feng, Hahn, Beatrice, Shaw, George M, Ochsenbauer, Christina, Swanstrom, Ronald, Meshnick, Steve, Mwapasa, Victor, Kalilani, Linda, Fiscus, Susan, Montefiori, David, Haynes, Barton, Kwiek, Jesse, Alam, S Munir, Permar, Sallie R
Được phát hành 2013

Completeness of HIV-1 Envelope Glycan Shield at Transmission Determines Neutralization Breadth

Bằng Wagh, Kshitij, Kreider, Edward F., Li, Yingying, Barbian, Hannah J., Learn, Gerald H., Giorgi, Elena, Hraber, Peter T., Decker, Timothy G., Smith, Andrew G., Gondim, Marcos V., Gillis, Lindsey, Wandzilak, Jamie, Chuang, Gwo-Yu, Rawi, Reda, Cai, Fangping, Pellegrino, Pierre, Williams, Ian, Overbaugh, Julie, Gao, Feng, Kwong, Peter D., Haynes, Barton F., Shaw, George M., Borrow, Persephone, Seaman, Michael S., Hahn, Beatrice H., Korber, Bette
Xuất bản năm Cell Rep (2018)

Cooperation of B Cell Lineages in Induction of HIV-1-Broadly Neutralizing Antibodies

Bằng Gao, Feng, Bonsignori, Mattia, Liao, Hua-Xin, Kumar, Amit, Xia, Shi-Mao, Lu, Xiaozhi, Cai, Fangping, Hwang, Kwan-Ki, Song, Hongshuo, Zhou, Tongqing, Lynch, Rebecca M., Alam, S. Munir, Moody, M. Anthony, Ferrari, Guido, Berrong, Mark, Kelsoe, Garnett, Shaw, George M., Hahn, Beatrice H., Montefiori, David C., Kamanga, Gift, Cohen, Myron, Hraber, Peter, Kwong, Peter D., Korber, Bette T., Mascola, John R., Kepler, Thomas B., Haynes, Barton F.
Được phát hành 2014

Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection

Bằng Song, Hongshuo, Giorgi, Elena E., Ganusov, Vitaly V., Cai, Fangping, Athreya, Gayathri, Yoon, Hyejin, Carja, Oana, Hora, Bhavna, Hraber, Peter, Romero-Severson, Ethan, Jiang, Chunlai, Li, Xiaojun, Wang, Shuyi, Li, Hui, Salazar-Gonzalez, Jesus F., Salazar, Maria G., Goonetilleke, Nilu, Keele, Brandon F., Montefiori, David C., Cohen, Myron S., Shaw, George M., Hahn, Beatrice H., McMichael, Andrew J., Haynes, Barton F., Korber, Bette, Bhattacharya, Tanmoy, Gao, Feng
Xuất bản năm Nat Commun (2018)

Structural and genetic convergence of HIV-1 neutralizing antibodies in vaccinated non-human primates

Bằng Cai, Fangping, Chen, Wei-Hung, Wu, Weimin, Jones, Julia A., Choe, Misook, Gohain, Neelakshi, Shen, Xiaoying, LaBranche, Celia, Eaton, Amanda, Sutherland, Laura, Lee, Esther M., Hernandez, Giovanna E., Wu, Nelson R., Scearce, Richard, Seaman, Michael S., Moody, M. Anthony, Santra, Sampa, Wiehe, Kevin, Tomaras, Georgia D., Wagh, Kshitij, Korber, Bette, Bonsignori, Mattia, Montefiori, David C., Haynes, Barton F., de Val, Natalia, Joyce, M. Gordon, Saunders, Kevin O.
Xuất bản năm PLoS Pathog (2021)

Vertical T cell immunodominance and epitope entropy determine HIV-1 escape

Bằng Liu, Michael K.P., Hawkins, Natalie, Ritchie, Adam J., Ganusov, Vitaly V., Whale, Victoria, Brackenridge, Simon, Li, Hui, Pavlicek, Jeffrey W., Cai, Fangping, Rose-Abrahams, Melissa, Treurnicht, Florette, Hraber, Peter, Riou, Catherine, Gray, Clive, Ferrari, Guido, Tanner, Rachel, Ping, Li-Hua, Anderson, Jeffrey A., Swanstrom, Ronald, B, CHAVI Core, Cohen, Myron, Karim, Salim S. Abdool, Haynes, Barton, Borrow, Persephone, Perelson, Alan S., Shaw, George M., Hahn, Beatrice H., Williamson, Carolyn, Korber, Bette T., Gao, Feng, Self, Steve, McMichael, Andrew, Goonetilleke, Nilu
Được phát hành 2012