Generation of random mutant libraries with multiple primers in a single reaction

ανά Lu, Xiaozhi, Hora, Bhavna, Cai, Fangping, Gao, Feng
Έκδοση 2010

Transmission of Multiple HIV-1 Subtype C Transmitted/founder Viruses into the Same Recipients Was not Determined by Modest Phenotypic Differences

ανά Song, Hongshuo, Hora, Bhavna, Giorgi, Elena E., Kumar, Amit, Cai, Fangping, Bhattacharya, Tanmoy, Perelson, Alan S., Gao, Feng
Τόπος έκδοσης Sci Rep (2016)

Simultaneous Detection of Major Drug Resistance Mutations of HIV-1 Subtype B Viruses from Dried Blood Spot Specimens by Multiplex Allele-Specific Assay

ανά Zhang, Guoqing, Cai, Fangping, de Rivera, Ivette Lorenzana, Zhou, Zhiyong, Zhang, Jing, Nkengasong, John, Gao, Feng, Yang, Chunfu
Τόπος έκδοσης J Clin Microbiol (2015)

Evolution of Drug-Resistant Viral Populations during Interruption of Antiretroviral Therapy

ανά Wang, Dongning, Hicks, Charles B., Goswami, Neela D., Tafoya, Emi, Ribeiro, Ruy M., Cai, Fangping, Perelson, Alan S., Gao, Feng
Έκδοση 2011

Analysis of Low-Frequency Mutations Associated with Drug Resistance to Raltegravir before Antiretroviral Treatment

ανά Liu, Jia, Miller, Michael D., Danovich, Robert M., Vandergrift, Nathan, Cai, Fangping, Hicks, Charles B., Hazuda, Daria J., Gao, Feng
Έκδοση 2011

Clonal amplification and maternal-infant transmission of nevirapine-resistant HIV-1 variants in breast milk following single-dose nevirapine prophylaxis

ανά Permar, Sallie R, Salazar, Maria G, Gao, Feng, Cai, Fangping, Learn, Gerald H, Kalilani, Linda, Hahn, Beatrice H, Shaw, George M, Salazar-Gonzalez, Jesus F
Έκδοση 2013

Accumulated mutations by 6 months of infection collectively render transmitted/founder HIV-1 significantly less fit

ανά Wang, Chu, Liu, Donglai, Zuo, Tao, Hora, Bhavna, Cai, Fangping, Ding, Haitao, Kappes, John, Ochsenbauer, Christina, Kong, Wei, Yu, Xianghui, Bhattacharya, Tanmoy, Perelson, Alan S, Gao, Feng
Τόπος έκδοσης J Infect (2019)

Recombination-mediated escape from primary CD8+ T cells in acute HIV-1 infection

ανά Ritchie, Adam John, Cai, Fangping, Smith, Nicola MG, Chen, Sheri, Song, Hongshuo, Brackenridge, Simon, Abdool Karim, Salim S, Korber, Bette T, McMichael, Andrew J, Gao, Feng, Goonetilleke, Nilu
Έκδοση 2014

Comprehensive Characterization of the Transmitted/founder env Genes from a Single MSM Cohort in China

ανά Chen, Yue, Li, Ning, Zhang, Tong, Huang, Xiaojie, Cai, Fangping, Vandergrift, Nathan, Xin, Ruolei, Meng, Zhefeng, Zhang, Xiaoyan, Jiang, Chunlai, Xu, Xiaoning, Montefiori, David C, Gao, Feng, Wu, Hao
Τόπος έκδοσης J Acquir Immune Defic Syndr (2015)

Streamlined Subpopulation, Subtype, and Recombination Analysis of HIV-1 Half-Genome Sequences Generated by High-Throughput Sequencing

ανά Hora, Bhavna, Gulzar, Naila, Chen, Yue, Karagiannis, Konstantinos, Cai, Fangping, Su, Chang, Smith, Krista, Simonyan, Vahan, Shah, Sharaf Ali, Ahmed, Manzoor, Sanchez, Ana M., Stone, Mars, Cohen, Myron S., Denny, Thomas N., Mazumder, Raja, Gao, Feng
Τόπος έκδοσης mSphere (2020)

HIV Resistance and Prevention of Mother-to-Child Transmission Regimen in HIV-Infected Infants in Northern Tanzania

ανά Dow, Dorothy E., Schimana, Werner, Nyombi, Balthazar M., Mmbaga, Blandina T., Shayo, Aisa M., Bartlett, John A., Massambu, Charles G., Kifaro, Emmanuel G., Turner, Elizabeth L., DeMarco, Todd, Cai, Fangping, Cunningham, Coleen K., Buchanan, Ann M.
Τόπος έκδοσης AIDS Res Hum Retroviruses (2017)

Simultaneous Detection of Major Drug Resistance Mutations in the Protease and Reverse Transcriptase Genes for HIV-1 Subtype C by Use of a Multiplex Allele-Specific Assay

ανά Zhang, Guoqing, Cai, Fangping, Zhou, Zhiyong, DeVos, Joshua, Wagar, Nick, Diallo, Karidia, Zulu, Isaac, Wadonda-Kabondo, Nellie, Stringer, Jeffrey S. A., Weidle, Paul J., Ndongmo, Clement B., Sikazwe, Izukanji, Sarr, Abdoulaye, Kagoli, Matthew, Nkengasong, John, Gao, Feng, Yang, Chunfu
Έκδοση 2013

Cooperation between somatic mutation and germline-encoded residues enables antibody recognition of HIV-1 envelope glycans

ανά Wu, Nelson R., Nicely, Nathan I., Lee, Esther M., Reed, Rachel K., Watts, Brian E., Cai, Fangping, Walkowicz, William E., Aussedat, Baptiste, Jones, Julia A., Eaton, Amanda, Trama, Ashley M., Alam, S. Munir, Montefiori, David C., Haynes, Barton F., Saunders, Kevin O.
Τόπος έκδοσης PLoS Pathog (2019)

Impact of immune escape mutations on HIV-1 fitness in the context of the cognate transmitted/founder genome

ανά Song, Hongshuo, Pavlicek, Jeffrey W, Cai, Fangping, Bhattacharya, Tanmoy, Li, Hui, Iyer, Shilpa S, Bar, Katharine J, Decker, Julie M, Goonetilleke, Nilu, Liu, Michael KP, Berg, Anna, Hora, Bhavna, Drinker, Mark S, Eudailey, Josh, Pickeral, Joy, Moody, M Anthony, Ferrari, Guido, McMichael, Andrew, Perelson, Alan S, Shaw, George M, Hahn, Beatrice H, Haynes, Barton F, Gao, Feng
Έκδοση 2012

Postnatally-transmitted HIV-1 Envelope variants have similar neutralization-sensitivity and function to that of nontransmitted breast milk variants

ανά Fouda, Genevieve G, Mahlokozera, Tatenda, Salazar-Gonzalez, Jesus F, Salazar, Maria G, Learn, Gerald, Kumar, Surender B, Dennison, S Moses, Russell, Elizabeth, Rizzolo, Katherine, Jaeger, Frederick, Cai, Fangping, Vandergrift, Nathan A, Gao, Feng, Hahn, Beatrice, Shaw, George M, Ochsenbauer, Christina, Swanstrom, Ronald, Meshnick, Steve, Mwapasa, Victor, Kalilani, Linda, Fiscus, Susan, Montefiori, David, Haynes, Barton, Kwiek, Jesse, Alam, S Munir, Permar, Sallie R
Έκδοση 2013

Completeness of HIV-1 Envelope Glycan Shield at Transmission Determines Neutralization Breadth

ανά Wagh, Kshitij, Kreider, Edward F., Li, Yingying, Barbian, Hannah J., Learn, Gerald H., Giorgi, Elena, Hraber, Peter T., Decker, Timothy G., Smith, Andrew G., Gondim, Marcos V., Gillis, Lindsey, Wandzilak, Jamie, Chuang, Gwo-Yu, Rawi, Reda, Cai, Fangping, Pellegrino, Pierre, Williams, Ian, Overbaugh, Julie, Gao, Feng, Kwong, Peter D., Haynes, Barton F., Shaw, George M., Borrow, Persephone, Seaman, Michael S., Hahn, Beatrice H., Korber, Bette
Τόπος έκδοσης Cell Rep (2018)

Cooperation of B Cell Lineages in Induction of HIV-1-Broadly Neutralizing Antibodies

ανά Gao, Feng, Bonsignori, Mattia, Liao, Hua-Xin, Kumar, Amit, Xia, Shi-Mao, Lu, Xiaozhi, Cai, Fangping, Hwang, Kwan-Ki, Song, Hongshuo, Zhou, Tongqing, Lynch, Rebecca M., Alam, S. Munir, Moody, M. Anthony, Ferrari, Guido, Berrong, Mark, Kelsoe, Garnett, Shaw, George M., Hahn, Beatrice H., Montefiori, David C., Kamanga, Gift, Cohen, Myron, Hraber, Peter, Kwong, Peter D., Korber, Bette T., Mascola, John R., Kepler, Thomas B., Haynes, Barton F.
Έκδοση 2014

Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection

ανά Song, Hongshuo, Giorgi, Elena E., Ganusov, Vitaly V., Cai, Fangping, Athreya, Gayathri, Yoon, Hyejin, Carja, Oana, Hora, Bhavna, Hraber, Peter, Romero-Severson, Ethan, Jiang, Chunlai, Li, Xiaojun, Wang, Shuyi, Li, Hui, Salazar-Gonzalez, Jesus F., Salazar, Maria G., Goonetilleke, Nilu, Keele, Brandon F., Montefiori, David C., Cohen, Myron S., Shaw, George M., Hahn, Beatrice H., McMichael, Andrew J., Haynes, Barton F., Korber, Bette, Bhattacharya, Tanmoy, Gao, Feng
Τόπος έκδοσης Nat Commun (2018)

Structural and genetic convergence of HIV-1 neutralizing antibodies in vaccinated non-human primates

ανά Cai, Fangping, Chen, Wei-Hung, Wu, Weimin, Jones, Julia A., Choe, Misook, Gohain, Neelakshi, Shen, Xiaoying, LaBranche, Celia, Eaton, Amanda, Sutherland, Laura, Lee, Esther M., Hernandez, Giovanna E., Wu, Nelson R., Scearce, Richard, Seaman, Michael S., Moody, M. Anthony, Santra, Sampa, Wiehe, Kevin, Tomaras, Georgia D., Wagh, Kshitij, Korber, Bette, Bonsignori, Mattia, Montefiori, David C., Haynes, Barton F., de Val, Natalia, Joyce, M. Gordon, Saunders, Kevin O.
Τόπος έκδοσης PLoS Pathog (2021)

Vertical T cell immunodominance and epitope entropy determine HIV-1 escape

ανά Liu, Michael K.P., Hawkins, Natalie, Ritchie, Adam J., Ganusov, Vitaly V., Whale, Victoria, Brackenridge, Simon, Li, Hui, Pavlicek, Jeffrey W., Cai, Fangping, Rose-Abrahams, Melissa, Treurnicht, Florette, Hraber, Peter, Riou, Catherine, Gray, Clive, Ferrari, Guido, Tanner, Rachel, Ping, Li-Hua, Anderson, Jeffrey A., Swanstrom, Ronald, B, CHAVI Core, Cohen, Myron, Karim, Salim S. Abdool, Haynes, Barton, Borrow, Persephone, Perelson, Alan S., Shaw, George M., Hahn, Beatrice H., Williamson, Carolyn, Korber, Bette T., Gao, Feng, Self, Steve, McMichael, Andrew, Goonetilleke, Nilu
Έκδοση 2012