Direct observation of Bin/amphiphysin/Rvs (BAR) domain-induced membrane curvature by means of molecular dynamics simulations

Por Blood, Philip D., Voth, Gregory A.
Publicado em 2006

Membrane Remodeling from N-BAR Domain Interactions: Insights from Multi-Scale Simulation

Por Ayton, Gary S., Blood, Philip D., Voth, Gregory A.
Publicado em 2007

Factors Influencing Local Membrane Curvature Induction by N-BAR Domains as Revealed by Molecular Dynamics Simulations

Por Blood, Philip D., Swenson, Richard D., Voth, Gregory A.
Publicado em 2008

Implementation of molecular dynamics and its extensions with the coarse-grained UNRES force field on massively parallel systems; towards millisecond-scale simulations of protein st...

Por Liwo, Adam, Ołdziej, Stanisław, Czaplewski, Cezary, Kleinerman, Dana S., Blood, Philip, Scheraga, Harold A.
Publicado em 2010

Leveraging the national cyberinfrastructure for biomedical research

Por LeDuc, Richard, Vaughn, Matthew, Fonner, John M, Sullivan, Michael, Williams, James G, Blood, Philip D, Taylor, James, Barnett, William
Publicado em 2014

Enabling large-scale next-generation sequence assembly with Blacklight

Por Couger, M. Brian, Pipes, Lenore, Squina, Fabio, Prade, Rolf, Siepel, Adam, Palermo, Robert, Katze, Michael G., Mason, Christopher E., Blood, Philip D.
Publicado em 2014

TCGA Expedition: A Data Acquisition and Management System for TCGA Data

Por Chandran, Uma R., Medvedeva, Olga P., Barmada, M. Michael, Blood, Philip D., Chakka, Anish, Luthra, Soumya, Ferreira, Antonio, Wong, Kim F., Lee, Adrian V., Zhang, Zhihui, Budden, Robert, Scott, J. Ray, Berndt, Annerose, Berg, Jeremy M., Jacobson, Rebecca S.
Publicado no PLoS One (2016)

Novel transcriptome assembly and improved annotation of the whiteleg shrimp (Litopenaeus vannamei), a dominant crustacean in global seafood mariculture

Por Ghaffari, Noushin, Sanchez-Flores, Alejandro, Doan, Ryan, Garcia-Orozco, Karina D., Chen, Patricia L., Ochoa-Leyva, Adrian, Lopez-Zavala, Alonso A., Carrasco, J. Salvador, Hong, Chris, Brieba, Luis G., Rudiño-Piñera, Enrique, Blood, Philip D., Sawyer, Jason E., Johnson, Charles D., Dindot, Scott V., Sotelo-Mundo, Rogerio R., Criscitiello, Michael F.
Publicado no Sci Rep (2014)

De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity

Por Haas, Brian J., Papanicolaou, Alexie, Yassour, Moran, Grabherr, Manfred, Blood, Philip D., Bowden, Joshua, Couger, Matthew Brian, Eccles, David, Li, Bo, Lieber, Matthias, MacManes, Matthew D., Ott, Michael, Orvis, Joshua, Pochet, Nathalie, Strozzi, Francesco, Weeks, Nathan, Westerman, Rick, William, Thomas, Dewey, Colin N., Henschel, Robert, LeDuc, Richard D., Friedman, Nir, Regev, Aviv
Publicado em 2013

Critical Assessment of Metagenome Interpretation – a benchmark of computational metagenomics software

Por Sczyrba, Alexander, Hofmann, Peter, Belmann, Peter, Koslicki, David, Janssen, Stefan, Dröge, Johannes, Gregor, Ivan, Majda, Stephan, Fiedler, Jessika, Dahms, Eik, Bremges, Andreas, Fritz, Adrian, Garrido-Oter, Ruben, Jørgensen, Tue Sparholt, Shapiro, Nicole, Blood, Philip D., Gurevich, Alexey, Bai, Yang, Turaev, Dmitrij, DeMaere, Matthew Z., Chikhi, Rayan, Nagarajan, Niranjan, Quince, Christopher, Meyer, Fernando, Balvočiūtė, Monika, Hansen, Lars Hestbjerg, Sørensen, Søren J., Chia, Burton K. H., Denis, Bertrand, Froula, Jeff L., Wang, Zhong, Egan, Robert, Kang, Dongwan Don, Cook, Jeffrey J., Deltel, Charles, Beckstette, Michael, Lemaitre, Claire, Peterlongo, Pierre, Rizk, Guillaume, Lavenier, Dominique, Wu, Yu-Wei, Singer, Steven W., Jain, Chirag, Strous, Marc, Klingenberg, Heiner, Meinicke, Peter, Barton, Michael, Lingner, Thomas, Lin, Hsin-Hung, Liao, Yu-Chieh, Silva, Genivaldo Gueiros Z., Cuevas, Daniel A., Edwards, Robert A., Saha, Surya, Piro, Vitor C., Renard, Bernhard Y., Pop, Mihai, Klenk, Hans-Peter, Göker, Markus, Kyrpides, Nikos C., Woyke, Tanja, Vorholt, Julia A., Schulze-Lefert, Paul, Rubin, Edward M., Darling, Aaron E., Rattei, Thomas, McHardy, Alice C.
Publicado no Nat Methods (2017)