Phylogenomics of primates and their ancestral populations

por Siepel, Adam
Publicado 2009

Darwinian alchemy: Human genes from noncoding DNA

por Siepel, Adam
Publicado 2009

Challenges in funding and developing genomic software: roots and remedies

por Siepel, Adam
Publicado en Genome Biol (2019)

Cis-regulatory Elements and Human Evolution

por Siepel, Adam, Arbiza, Leonardo
Publicado en Curr Opin Genet Dev (2014)

An evolutionary framework for measuring epigenomic information and estimating cell-type specific fitness consequences

por Gulko, Brad, Siepel, Adam
Publicado en Nat Genet (2018)

Estimation of allele-specific fitness effects across human protein-coding sequences and implications for disease

por Huang, Yi-Fei, Siepel, Adam
Publicado en Genome Res (2019)

PHAST and RPHAST: phylogenetic analysis with space/time models

por Hubisz, Melissa J., Pollard, Katherine S., Siepel, Adam
Publicado 2011

Diverse modes of evolutionary emergence and flux of conserved microRNA clusters

por Mohammed, Jaaved, Siepel, Adam, Lai, Eric C.
Publicado en RNA (2014)

Fast, scalable prediction of deleterious noncoding variants from functional and population genomic data

por Huang, Yi-Fei, Gulko, Brad, Siepel, Adam
Publicado en Nat Genet (2017)

From summary statistics to gene trees: Methods for inferring positive selection

por Hejase, Hussein A., Dukler, Noah, Siepel, Adam
Publicado en Trends Genet (2020)

Phylogenetic Modeling of Regulatory Element Turnover Based on Epigenomic Data

por Dukler, Noah, Huang, Yi-Fei, Siepel, Adam
Publicado en Mol Biol Evol (2020)

Inference of Natural Selection from Interspersed Genomic Elements Based on Polymorphism and Divergence

por Gronau, Ilan, Arbiza, Leonardo, Mohammed, Jaaved, Siepel, Adam
Publicado 2013

Contrasting X-Linked and Autosomal Diversity across 14 Human Populations

por Arbiza, Leonardo, Gottipati, Srikanth, Siepel, Adam, Keinan, Alon
Publicado 2014

Mapping gene flow between ancient hominins through demography-aware inference of the ancestral recombination graph

por Hubisz, Melissa J., Williams, Amy L., Siepel, Adam
Publicado en PLoS Genet (2020)

The Role of GC-Biased Gene Conversion in Shaping the Fastest Evolving Regions of the Human Genome

por Kostka, Dennis, Hubisz, Melissa J., Siepel, Adam, Pollard, Katherine S.
Publicado 2012

The impact of age, biogenesis, and genomic clustering on Drosophila microRNA evolution

por Mohammed, Jaaved, Flynt, Alex S., Siepel, Adam, Lai, Eric C.
Publicado 2013

Probabilities of Fitness Consequences for Point Mutations Across the Human Genome

por Gulko, Brad, Hubisz, Melissa J., Gronau, Ilan, Siepel, Adam
Publicado en Nat Genet (2015)

Is a super-enhancer greater than the sum of its parts?

por Dukler, Noah, Gulko, Brad, Huang, Yi-Fei, Siepel, Adam
Publicado en Nat Genet (2016)

PhastWeb: a web interface for evolutionary conservation scoring of multiple sequence alignments using phastCons and phyloP

por Ramani, Ritika, Krumholz, Katie, Huang, Yi-Fei, Siepel, Adam
Publicado en Bioinformatics (2019)

Accelerated sequence divergence of conserved genomic elements in Drosophila melanogaster

por Holloway, Alisha K., Begun, David J., Siepel, Adam, Pollard, Katherine S.
Publicado 2008