GASSST: global alignment short sequence search tool

Por Rizk, Guillaume, Lavenier, Dominique
Publicado em 2010

Space-efficient and exact de Bruijn graph representation based on a Bloom filter

Por Chikhi, Rayan, Rizk, Guillaume
Publicado em 2013

MindTheGap: integrated detection and assembly of short and long insertions

Por Rizk, Guillaume, Gouin, Anaïs, Chikhi, Rayan, Lemaitre, Claire
Publicado no Bioinformatics (2014)

GATB: Genome Assembly & Analysis Tool Box

Por Drezen, Erwan, Rizk, Guillaume, Chikhi, Rayan, Deltel, Charles, Lemaitre, Claire, Peterlongo, Pierre, Lavenier, Dominique
Publicado em 2014

Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph

Por Benoit, Gaëtan, Lemaitre, Claire, Lavenier, Dominique, Drezen, Erwan, Dayris, Thibault, Uricaru, Raluca, Rizk, Guillaume
Publicado no BMC Bioinformatics (2015)

Reference-free detection of isolated SNPs

Por Uricaru, Raluca, Rizk, Guillaume, Lacroix, Vincent, Quillery, Elsa, Plantard, Olivier, Chikhi, Rayan, Lemaitre, Claire, Peterlongo, Pierre
Publicado no Nucleic Acids Res (2015)

Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum

Por Legeai, Fabrice, Rizk, Guillaume, Walsh, Thomas, Edwards, Owain, Gordon, Karl, Lavenier, Dominique, Leterme, Nathalie, Méreau, Agnès, Nicolas, Jacques, Tagu, Denis, Jaubert-Possamai, Stéphanie
Publicado em 2010

FEELnc: a tool for long non-coding RNA annotation and its application to the dog transcriptome

Por Wucher, Valentin, Legeai, Fabrice, Hédan, Benoît, Rizk, Guillaume, Lagoutte, Lætitia, Leeb, Tosso, Jagannathan, Vidhya, Cadieu, Edouard, David, Audrey, Lohi, Hannes, Cirera, Susanna, Fredholm, Merete, Botherel, Nadine, Leegwater, Peter A.J., Le Béguec, Céline, Fieten, Hille, Johnson, Jeremy, Alföldi, Jessica, André, Catherine, Lindblad-Toh, Kerstin, Hitte, Christophe, Derrien, Thomas
Publicado no Nucleic Acids Res (2017)