Dynamic regulation of miRNA expression in ordered stages of cellular development

Por Neilson, Joel R., Zheng, Grace X.Y., Burge, Christopher B., Sharp, Phillip A.
Publicado em 2007

Promoters Recognized by Forkhead Proteins Exist for Individual 21U-RNAs

Por Cecere, Germano, Zheng, Grace X.Y., Mansisidor, Andres R., Klymko, Katherine E., Grishok, Alla
Publicado em 2012

MicroRNAs can generate thresholds in target gene expression

Por Mukherji, Shankar, Ebert, Margaret S., Zheng, Grace X., Tsang, John S., Sharp, Phillip A., van Oudenaarden, Alexander
Publicado em 2011

Genome-wide impact of a recently expanded microRNA cluster in mouse

Por Zheng, Grace X. Y., Ravi, Arvind, Gould, Genevieve M., Burge, Christopher B., Sharp, Phillip A.
Publicado em 2011

Dicer-microRNA-Myc circuit promotes transcription of hundreds of long noncoding RNAs

Por Zheng, Grace X Y, Do, Brian T, Webster, Dan E, Khavari, Paul A, Chang, Howard Y
Publicado no Nat Struct Mol Biol (2014)

Genome-wide identification of Ago2 binding sites from mouse embryonic stem cells with and without mature microRNAs

Por Leung, Anthony K L, Young, Amanda G, Bhutkar, Arjun, Zheng, Grace X, Bosson, Andrew D, Nielsen, Cydney B, Sharp, Phillip A
Publicado em 2011

A Latent Pro-Survival Function for the Mir-290-295 Cluster in Mouse Embryonic Stem Cells

Por Zheng, Grace X. Y., Ravi, Arvind, Calabrese, J. Mauro, Medeiros, Lea A., Kirak, Oktay, Dennis, Lucas M., Jaenisch, Rudolf, Burge, Christopher B., Sharp, Phillip A.
Publicado em 2011

Suppression of progenitor differentiation requires the long noncoding RNA ANCR

Por Kretz, Markus, Webster, Dan E., Flockhart, Ross J., Lee, Carolyn S., Zehnder, Ashley, Lopez-Pajares, Vanessa, Qu, Kun, Zheng, Grace X.Y., Chow, Jennifer, Kim, Grace E., Rinn, John L., Chang, Howard Y., Siprashvili, Zurab, Khavari, Paul A.
Publicado em 2012

Control of somatic tissue differentiation by the long non-coding RNA TINCR

Por Kretz, Markus, Siprashvili, Zurab, Chu, Ci, Webster, Dan E., Zehnder, Ashley, Qu, Kun, Lee, Carolyn S., Flockhart, Ross J., Groff, Abigail F., Chow, Jennifer, Johnston, Danielle, Kim, Grace E., Spitale, Robert C., Flynn, Ryan A., Zheng, Grace X. Y., Aiyer, Subhadra, Raj, Arjun, Rinn, John L., Chang, Howard Y., Khavari, Paul A.
Publicado em 2012

Non-equivalence of Wnt and R-spondin ligands during Lgr5(+) intestinal stem cell self-renewal

Por Yan, Kelley S., Janda, Claudia Y., Chang, Junlei, Zheng, Grace X.Y., Larkin, Kathryn A., Luca, Vincent C., Chia, Luis A., Mah, Amanda T., Han, Arnold, Terry, Jessica M., Ootani, Akifumi, Roelf, Kelly, Lee, Mark, Yuan, Jenny, Li, Xiao, Bolen, Christopher R., Wilhelmy, Julie, Davies, Paige S., Ueno, Hiroo, von Furstenberg, Richard J., Belgrader, Phillip, Ziraldo, Solongo B., Ordonez, Heather, Henning, Susan J., Wong, Melissa H., Snyder, Michael P., Weissman, Irving L., Hsueh, Aaron J., Mikkelsen, Tarjei S., Garcia, K. Christopher, Kuo, Calvin J.
Publicado no Nature (2017)

Massively parallel digital transcriptional profiling of single cells

Por Zheng, Grace X. Y., Terry, Jessica M., Belgrader, Phillip, Ryvkin, Paul, Bent, Zachary W., Wilson, Ryan, Ziraldo, Solongo B., Wheeler, Tobias D., McDermott, Geoff P., Zhu, Junjie, Gregory, Mark T., Shuga, Joe, Montesclaros, Luz, Underwood, Jason G., Masquelier, Donald A., Nishimura, Stefanie Y., Schnall-Levin, Michael, Wyatt, Paul W., Hindson, Christopher M., Bharadwaj, Rajiv, Wong, Alexander, Ness, Kevin D., Beppu, Lan W., Deeg, H. Joachim, McFarland, Christopher, Loeb, Keith R., Valente, William J., Ericson, Nolan G., Stevens, Emily A., Radich, Jerald P., Mikkelsen, Tarjei S., Hindson, Benjamin J., Bielas, Jason H.
Publicado no Nat Commun (2017)

Intestinal enteroendocrine lineage cells possess homeostatic and injury-inducible stem cell activity

Por Yan, Kelley S., Gevaert, Olivier, Zheng, Grace X.Y., Anchang, Benedict, Probert, Christopher S., Larkin, Kathryn A., Davies, Paige S., Cheng, Zhuan-fen, Kaddis, John S., Han, Arnold, Roelf, Kelly, Calderon, Ruben I., Cynn, Esther, Hu, Xiaoyi, Mandleywala, Komal, Wilhelmy, Julie, Grimes, Sue, Corney, David, Boutet, Stéphane C., Terry, Jessica M., Belgrader, Phillip, Ziraldo, Solongo B., Mikkelsen, Tarjei S., Wang, Fengchao, von Furstenberg, Richard J., Smith, Nicholas R., Chandrakesan, Parthasarathy, May, Randal, Chrissy, MaryAnn, Jain, Rajan, Cartwright, Christine A., Niland, Joyce C., Hong, Young-Kwon, Carrington, Jill, Breault, David, Epstein, Jonathan, Houchen, Courtney W., Lynch, John P., Martin, Martin G., Plevritis, Sylvia K., Curtis, Christina, Ji, Hanlee P., Li, Linheng, Henning, Susan J., Wong, Melissa H., Kuo, Calvin J.
Publicado no Cell Stem Cell (2017)

Extensive sequencing of seven human genomes to characterize benchmark reference materials

Por Zook, Justin M., Catoe, David, McDaniel, Jennifer, Vang, Lindsay, Spies, Noah, Sidow, Arend, Weng, Ziming, Liu, Yuling, Mason, Christopher E., Alexander, Noah, Henaff, Elizabeth, McIntyre, Alexa B.R., Chandramohan, Dhruva, Chen, Feng, Jaeger, Erich, Moshrefi, Ali, Pham, Khoa, Stedman, William, Liang, Tiffany, Saghbini, Michael, Dzakula, Zeljko, Hastie, Alex, Cao, Han, Deikus, Gintaras, Schadt, Eric, Sebra, Robert, Bashir, Ali, Truty, Rebecca M., Chang, Christopher C., Gulbahce, Natali, Zhao, Keyan, Ghosh, Srinka, Hyland, Fiona, Fu, Yutao, Chaisson, Mark, Xiao, Chunlin, Trow, Jonathan, Sherry, Stephen T., Zaranek, Alexander W., Ball, Madeleine, Bobe, Jason, Estep, Preston, Church, George M., Marks, Patrick, Kyriazopoulou-Panagiotopoulou, Sofia, Zheng, Grace X.Y., Schnall-Levin, Michael, Ordonez, Heather S., Mudivarti, Patrice A., Giorda, Kristina, Sheng, Ying, Rypdal, Karoline Bjarnesdatter, Salit, Marc
Publicado no Sci Data (2016)

Haplotyping germline and cancer genomes using high-throughput linked-read sequencing

Por Zheng, Grace X.Y., Lau, Billy T., Schnall-Levin, Michael, Jarosz, Mirna, Bell, John M., Hindson, Christopher M., Kyriazopoulou-Panagiotopoulou, Sofia, Masquelier, Donald A., Merrill, Landon, Terry, Jessica M., Mudivarti, Patrice A., Wyatt, Paul W., Bharadwaj, Rajiv, Makarewicz, Anthony J., Li, Yuan, Belgrader, Phillip, Price, Andrew D., Lowe, Adam J., Marks, Patrick, Vurens, Gerard M., Hardenbol, Paul, Montesclaros, Luz, Luo, Melissa, Greenfield, Lawrence, Wong, Alexander, Birch, David E., Short, Steven W., Bjornson, Keith P., Patel, Pranav, Hopmans, Erik S., Wood, Christina, Kaur, Sukhvinder, Lockwood, Glenn K., Stafford, David, Delaney, Joshua P., Wu, Indira, Ordonez, Heather S., Grimes, Susan M., Greer, Stephanie, Lee, Josephine Y., Belhocine, Kamila, Giorda, Kristina M., Heaton, William H., McDermott, Geoffrey P., Bent, Zachary W., Meschi, Francesca, Kondov, Nikola O., Wilson, Ryan, Bernate, Jorge A., Gauby, Shawn, Kindwall, Alex, Bermejo, Clara, Fehr, Adrian N., Chan, Adrian, Saxonov, Serge, Ness, Kevin D., Hindson, Benjamin J., Ji, Hanlee P.
Publicado no Nat Biotechnol (2016)