Quantitative Proteomics Using Reductive Dimethylation for Stable Isotope Labeling

Por Tolonen, Andrew C., Haas, Wilhelm
Publicado em 2014

Dissecting the human microbiome with single-cell genomics

Por Tolonen, Andrew C., Xavier, Ramnik J.
Publicado no Genome Med (2017)

Genetic Manipulation of Prochlorococcus Strain MIT9313: Green Fluorescent Protein Expression from an RSF1010 Plasmid and Tn5 Transposition

Por Tolonen, Andrew C., Liszt, Gregory B., Hess, Wolfgang R.
Publicado em 2006

Targeted gene inactivation in Clostridium phytofermentans shows that cellulose degradation requires the family 9 hydrolase Cphy3367

Por Tolonen, Andrew C, Chilaka, Amanda C, Church, George M
Publicado em 2009

A Targetron-Recombinase System for Large-Scale Genome Engineering of Clostridia

Por Cerisy, Tristan, Rostain, William, Chhun, Audam, Boutard, Magali, Salanoubat, Marcel, Tolonen, Andrew C.
Publicado no mSphere (2019)

Optimized in situ construction of oligomers on an array surface

Por Tolonen, Andrew C., Albeanu, Dinu F., Corbett, Julia F., Handley, Heather, Henson, Charlotte, Malik, Pratap
Publicado em 2002

Physiology, Genomics, and Pathway Engineering of an Ethanol-Tolerant Strain of Clostridium phytofermentans

Por Tolonen, Andrew C., Zuroff, Trevor R., Ramya, Mohandass, Boutard, Magali, Cerisy, Tristan, Curtis, Wayne R.
Publicado no Appl Environ Microbiol (2015)

Transfer of photosynthesis genes to and from Prochlorococcus viruses

Por Lindell, Debbie, Sullivan, Matthew B., Johnson, Zackary I., Tolonen, Andrew C., Rohwer, Forest, Chisholm, Sallie W.
Publicado em 2004

Proteome-wide systems analysis of a cellulosic biofuel-producing microbe

Por Tolonen, Andrew C, Haas, Wilhelm, Chilaka, Amanda C, Aach, John, Gygi, Steven P, Church, George M
Publicado em 2011

Functional Diversity of Carbohydrate-Active Enzymes Enabling a Bacterium to Ferment Plant Biomass

Por Boutard, Magali, Cerisy, Tristan, Nogue, Pierre-Yves, Alberti, Adriana, Weissenbach, Jean, Salanoubat, Marcel, Tolonen, Andrew C.
Publicado no PLoS Genet (2014)

Global repositioning of transcription start sites in a plant-fermenting bacterium

Por Boutard, Magali, Ettwiller, Laurence, Cerisy, Tristan, Alberti, Adriana, Labadie, Karine, Salanoubat, Marcel, Schildkraut, Ira, Tolonen, Andrew C.
Publicado no Nat Commun (2016)

Global gene expression of Prochlorococcus ecotypes in response to changes in nitrogen availability

Por Tolonen, Andrew C, Aach, John, Lindell, Debbie, Johnson, Zackary I, Rector, Trent, Steen, Robert, Church, George M, Chisholm, Sallie W
Publicado em 2006

ABC Transporters Required for Hexose Uptake by Clostridium phytofermentans

Por Cerisy, Tristan, Iglesias, Alba, Rostain, William, Boutard, Magali, Pelle, Christine, Perret, Alain, Salanoubat, Marcel, Fierobe, Henri-Pierre, Tolonen, Andrew C.
Publicado no J Bacteriol (2019)

Evolution of a Biomass-Fermenting Bacterium To Resist Lignin Phenolics

Por Cerisy, Tristan, Souterre, Tiffany, Torres-Romero, Ismael, Boutard, Magali, Dubois, Ivan, Patrouix, Julien, Labadie, Karine, Berrabah, Wahiba, Salanoubat, Marcel, Doring, Volker, Tolonen, Andrew C.
Publicado no Appl Environ Microbiol (2017)

Invertible promoters mediate bacterial phase variation, antibiotic resistance, and host adaptation in the gut

Por Jiang, Xiaofang, Hall, A. Brantley, Arthur, Timothy D., Plichta, Damian R., Covington, Christian T., Poyet, Mathilde, Crothers, Jessica, Moses, Peter L., Tolonen, Andrew C., Vlamakis, Hera, Alm, Eric J., Xavier, Ramnik J.
Publicado no Science (2019)

Cell type- and stimulation-dependent transcriptional programs regulated by Atg16L1 and its Crohn’s disease risk-variant T300A

Por Varma, Mukund, Kadoki, Motohiko, Lefkovith, Ariel, Conway, Kara L., Gao, Kevin, Mohanan, Vishnu, Tusi, Betsabeh Khoramian, Graham, Daniel B., Latorre, Isabel J., Tolonen, Andrew C., Khor, Bernard, Ng, Aylwin C.Y., Xavier, Ramnik J.
Publicado no J Immunol (2020)

Precise Manipulation of Chromosomes in Vivo Enables Genome-Wide Codon Replacement

Por Isaacs, Farren J., Carr, Peter A., Wang, Harris H., Lajoie, Marc J., Sterling, Bram, Kraal, Laurens, Tolonen, Andrew C., Gianoulis, Tara A., Goodman, Daniel B., Reppas, Nikos B., Emig, Christopher J., Bang, Duhee, Hwang, Samuel J., Jewett, Michael C., Jacobson, Joseph M., Church, George M.
Publicado no Science (2011)

Growth effects of N-acylethanolamines on gut bacteria reflect altered bacterial abundances in Inflammatory Bowel Disease

Por Fornelos, Nadine, Franzosa, Eric A., Bishai, Jason, Annand, John W., Oka, Akihiko, Lloyd-Price, Jason, Arthur, Timothy D., Garner, Ashley, Avila-Pacheco, Julian, Haiser, Henry J., Tolonen, Andrew C., Porter, Jeffrey A., Clish, Clary B., Sartor, R. Balfour, Huttenhower, Curtis, Vlamakis, Hera, Xavier, Ramnik J.
Publicado no Nat Microbiol (2020)

Highly plastic genome of Microcystis aeruginosa PCC 7806, a ubiquitous toxic freshwater cyanobacterium

Por Frangeul, Lionel, Quillardet, Philippe, Castets, Anne-Marie, Humbert, Jean-François, Matthijs, Hans CP, Cortez, Diego, Tolonen, Andrew, Zhang, Cheng-Cai, Gribaldo, Simonetta, Kehr, Jan-Christoph, Zilliges, Yvonne, Ziemert, Nadine, Becker, Sven, Talla, Emmanuel, Latifi, Amel, Billault, Alain, Lepelletier, Anthony, Dittmann, Elke, Bouchier, Christiane, Tandeau de Marsac, Nicole
Publicado em 2008

Genome and Transcriptome of Clostridium phytofermentans, Catalyst for the Direct Conversion of Plant Feedstocks to Fuels

Por Petit, Elsa, Coppi, Maddalena V., Hayes, James C., Tolonen, Andrew C., Warnick, Thomas, Latouf, William G., Amisano, Danielle, Biddle, Amy, Mukherjee, Supratim, Ivanova, Natalia, Lykidis, Athanassios, Land, Miriam, Hauser, Loren, Kyrpides, Nikos, Henrissat, Bernard, Lau, Joanne, Schnell, Danny J., Church, George M., Leschine, Susan B., Blanchard, Jeffrey L.
Publicado no PLoS One (2015)