Therapeutic Opportunities in Inflammatory Bowel Disease: Mechanistic Dissection of Host-Microbiome Relationships

по Plichta, Damian R., Graham, Daniel B., Subramanian, Sathish, Xavier, Ramnik J.
Опубликовано в: Cell (2019)

Impact of the rumen microbiome on milk fatty acid composition of Holstein cattle

по Buitenhuis, Bart, Lassen, Jan, Noel, Samantha Joan, Plichta, Damian R., Sørensen, Peter, Difford, Gareth F., Poulsen, Nina A.
Опубликовано в: Genet Sel Evol (2019)

Plasmalogen Biosynthesis by Anaerobic Bacteria: Identification of a Two-Gene Operon Responsible for Plasmalogen Production in Clostridium perfringens

по Jackson, David R., Cassilly, Chelsi D., Plichta, Damian R., Vlamakis, Hera, Liu, Hualan, Melville, Stephen B., Xavier, Ramnik J., Clardy, Jon
Опубликовано в: ACS Chem Biol (2020)

Cholesterol Metabolism by Uncultured Human Gut Bacteria Influences Host Cholesterol Level

по Kenny, Douglas J., Plichta, Damian R., Shungin, Dmitry, Koppel, Nitzan, Hall, A. Brantley, Fu, Beverly, Vasan, Ramachandran S., Shaw, Stanley Y., Vlamakis, Hera, Balskus, Emily P., Xavier, Ramnik J.
Опубликовано в: Cell Host Microbe (2020)

Invertible promoters mediate bacterial phase variation, antibiotic resistance, and host adaptation in the gut

по Jiang, Xiaofang, Hall, A. Brantley, Arthur, Timothy D., Plichta, Damian R., Covington, Christian T., Poyet, Mathilde, Crothers, Jessica, Moses, Peter L., Tolonen, Andrew C., Vlamakis, Hera, Alm, Eric J., Xavier, Ramnik J.
Опубликовано в: Science (2019)

Akkermansia muciniphila induces intestinal adaptive immune responses during homeostasis

по Ansaldo, Eduard, Slayden, Leianna C., Ching, Krystal L., Koch, Meghan A., Wolf, Natalie K., Plichta, Damian R., Brown, Eric M., Graham, Daniel B., Xavier, Ramnik J., Moon, James J., Barton, Gregory M.
Опубликовано в: Science (2019)

Congruent microbiome signatures in fibrosis-prone autoimmune diseases: IgG4-related disease and systemic sclerosis

по Plichta, Damian R., Somani, Juhi, Pichaud, Matthieu, Wallace, Zachary S., Fernandes, Ana D., Perugino, Cory A., Lähdesmäki, Harri, Stone, John H., Vlamakis, Hera, Chung, Daniel C., Khanna, Dinesh, Pillai, Shiv, Xavier, Ramnik J.
Опубликовано в: Genome Med (2021)

Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life

по Vatanen, Tommi, Plichta, Damian R., Somani, Juhi, Münch, Philipp C., Arthur, Timothy D., Hall, Andrew Brantley, Rudolf, Sabine, Oakeley, Edward J., Ke, Xiaobo, Young, Rachel A., Haiser, Henry J., Kolde, Raivo, Yassour, Moran, Luopajärvi, Kristiina, Siljander, Heli, Virtanen, Suvi M., Ilonen, Jorma, Uibo, Raivo, Tillmann, Vallo, Mokurov, Sergei, Dorshakova, Natalya, Porter, Jeffrey A., McHardy, Alice C., Lähdesmäki, Harri, Vlamakis, Hera, Huttenhower, Curtis, Knip, Mikael, Xavier, Ramnik J.
Опубликовано в: Nat Microbiol (2018)

Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases

по Lloyd-Price, Jason, Arze, Cesar, Ananthakrishnan, Ashwin N., Schirmer, Melanie, Avila-Pacheco, Julian, Poon, Tiffany W., Andrews, Elizabeth, Ajami, Nadim J., Bonham, Kevin S., Brislawn, Colin J., Casero, David, Courtney, Holly, Gonzalez, Antonio, Graeber, Thomas G., Hall, A. Brantley, Lake, Kathleen, Landers, Carol J., Mallick, Himel, Plichta, Damian R., Prasad, Mahadev, Rahnavard, Gholamali, Sauk, Jenny, Shungin, Dmitry, Vázquez-Baeza, Yoshiki, White, Richard A., Braun, Jonathan, Denson, Lee A., Jansson, Janet K., Knight, Rob, Kugathasan, Subra, McGovern, Dermot P. B., Petrosino, Joseph F., Stappenbeck, Thaddeus S., Winter, Harland S., Clish, Clary B., Franzosa, Eric A., Vlamakis, Hera, Xavier, Ramnik J., Huttenhower, Curtis
Опубликовано в: Nature (2019)